prot_Ecto-sp13_S_contig8038.19367.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8038.19367.1
Unique Nameprot_Ecto-sp13_S_contig8038.19367.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length180
Homology
BLAST of mRNA_Ecto-sp13_S_contig8038.19367.1 vs. uniprot
Match: D8LKK4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKK4_ECTSI)

HSP 1 Score: 307 bits (787), Expect = 1.150e-104
Identity = 176/179 (98.32%), Postives = 178/179 (99.44%), Query Frame = 0
Query:    1 MANFEDGMPTPYIPPDKNTLYVRPAEALRRMDVSKLIVIWPNNVDSTRTIKKGRRIPKASGCPSPTVEDMSQVLEFLQLWHAVEPYKAYPREPWVLGRVRVRLVDEDGVPWNPEVPDRPSLMKKMGELMPNLKSRIDRISKAKKDAEALAXXXXXXXXXXXXXXXXXXXXXXGKKKGKR 179
            MANFEDGMPTPYIPPDKN+LYVRPAEALRRMDVSKLIVIWPNNVDSTRTIK+GRRIPKASGCPSPTVEDMSQVLEFLQLWHAVEPYKAYPREPWVLGRVRVRL DEDGVPWNPEVPDRPSLMKKMGELMPNLKSRIDRISKAKKDAEALAXXXXXXXXXXXXXXXXXXXXXXGKKKGKR
Sbjct:   25 MANFEDGMPTPYIPPDKNSLYVRPAEALRRMDVSKLIVIWPNNVDSTRTIKRGRRIPKASGCPSPTVEDMSQVLEFLQLWHAVEPYKAYPREPWVLGRVRVRLADEDGVPWNPEVPDRPSLMKKMGELMPNLKSRIDRISKAKKDAEALAXXXXXXXXXXXXXXXXXXXXXXGKKKGKR 203          
BLAST of mRNA_Ecto-sp13_S_contig8038.19367.1 vs. uniprot
Match: A0A836CKP4_9STRA (Signal recognition particle, SRP19 subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKP4_9STRA)

HSP 1 Score: 133 bits (334), Expect = 3.060e-36
Identity = 65/145 (44.83%), Postives = 94/145 (64.83%), Query Frame = 0
Query:    1 MANFEDGMPTPYIPPDKNTLYVRPAEALRRMDVSKLIVIWPNNVDSTRTIKKGRRIPKASGCPSPTVEDMSQVLEFLQLWHAVEPYKAYPREPWVLGRVRVRLVDEDGVPWNPEVPDRPSLMKKMGELMPNLKSRIDRISKAKKD 145
            M + ED       PPDK   Y+ P + +  +D SK IV+WPN +D  +TI +GRR+ K   C  P V ++  + +   LW+A+EP+K YPREP+VLGRVRVR+   DG P +P++PD+ +L+KKMG L+PNL  R DR+ +  K+
Sbjct:    5 MKSMEDEQQELPPPPDKTLSYLWPDD-MGEVDASKWIVVWPNYIDKAKTIAQGRRVAKEFACDIPIVIELGAICQAFNLWYALEPFKGYPREPYVLGRVRVRVTMPDGTPAHPDIPDKVALLKKMGTLIPNLHIRKDRLLQMSKE 148          
BLAST of mRNA_Ecto-sp13_S_contig8038.19367.1 vs. uniprot
Match: A0A7S2B120_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B120_9STRA)

HSP 1 Score: 124 bits (310), Expect = 2.200e-32
Identity = 62/131 (47.33%), Postives = 86/131 (65.65%), Query Frame = 0
Query:   15 PDKNTLYVRPAEALRRMDVSKLIVIWPNNVDSTRTIKKGRRIPKASGCPSPTVEDMSQVLEFLQLWHAVEPYKAYPREPWVLGRVRVRLVDEDGVPWNPEVPDRPSLMKKMGELMPNLKSRIDRISKAKKD 145
            P+ NT    P     ++D +K I +WP+N++S RT+ KGRR+P +  C  P V +MS+VL+F +L H +EPYK YPR+    GRV+V+L DED  P + EVP R  LM KMGEL+P LK R  R+  AK++
Sbjct:   37 PNPNTKISWPPSMAGKLDDAKFICVWPSNINSKRTLAKGRRVPISHSCEDPIVAEMSEVLQFYKLNHVIEPYKCYPRDWTYPGRVKVKLFDEDDQPCSEEVPSRRVLMMKMGELIPKLKIRNKRMEMAKRN 167          
BLAST of mRNA_Ecto-sp13_S_contig8038.19367.1 vs. uniprot
Match: A0A6V2W292_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2W292_HETAK)

HSP 1 Score: 120 bits (302), Expect = 1.620e-30
Identity = 59/124 (47.58%), Postives = 83/124 (66.94%), Query Frame = 0
Query:   16 DKNTLYVRPAEALRRMDVSKLIVIWPNNVDSTRTIKKGRRIPKASGCPSPTVEDMSQVLEFLQLWHAVEPYKAYPREPWVLGRVRVRLVDEDGVPWNPEVPDRPSLMKKMGELMPNLKSRIDRI 139
            DKN  +  P    ++ D S+ I +WPNN++S +T+K+GRRI K   C  P VEDMS+V ++LQL H  +PYK YPR+    GR+ VRL  EDG P+NP+VP R +L+ +MG L+P L +R  R+
Sbjct:   93 DKNASFYWPYN--QQSDYSRFITLWPNNLNSKKTVKQGRRIGKEQACEDPIVEDMSEVCQYLQLHHVKQPYKGYPRDWLCQGRLLVRLTREDGTPYNPKVPTRRALLVEMGRLIPKLSNRQRRL 214          
BLAST of mRNA_Ecto-sp13_S_contig8038.19367.1 vs. uniprot
Match: A0A7S2SLH7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SLH7_9STRA)

HSP 1 Score: 116 bits (291), Expect = 1.520e-29
Identity = 60/128 (46.88%), Postives = 83/128 (64.84%), Query Frame = 0
Query:   13 IPPDKNTLYVRPAEALRRMDVSKLIVIWPNNVDSTRTIKKGRRIPKASGCPSPTVEDMSQVLEFLQLWHAVEPYKAYPREPWVLGRVRVRLVDEDGVPWNPEVPDRPSLMKKMGELMPNLKSRIDRIS 140
            + PD NT    P     ++D S+ +VIW  N++ +  + +GRRIP AS C  P V +MS+VL+  +L H +EP+K YPR   V GRVRV+L+D++  P NPEVP R  LM +MGEL+P LK R  RI+
Sbjct:   36 VAPDPNTKITWPQSLAGKIDDSRFLVIWTININRSFKLSEGRRIPIASACEDPIVAEMSEVLQHFKLTHVIEPFKVYPRV-MVPGRVRVKLIDDEDQPCNPEVPTRRVLMMRMGELIPKLKIRSQRIA 162          
BLAST of mRNA_Ecto-sp13_S_contig8038.19367.1 vs. uniprot
Match: A0A8J5IME7_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5IME7_9STRA)

HSP 1 Score: 111 bits (277), Expect = 1.900e-27
Identity = 52/114 (45.61%), Postives = 81/114 (71.05%), Query Frame = 0
Query:   34 SKLIVIWPNNVDSTRTIKKGRRIPKASGCPSPTVEDMSQVLEFLQLWHAVEPYKAYPREPWVLGRVRVRLVDEDGVPWNPEVPDRPSLMKKMGELMPNLKSRIDRISKAKKDAE 147
            S  +  +PN +D+ +T+++GRRIPK + C +P  ++MS+V  + +L H +EP K YPR+  V GR+RVRLV +DG P NP++P+R +LM KM EL+P L+SR  R+ K  ++A+
Sbjct:   54 SSFMTFYPNYIDNKKTVQQGRRIPKQNACEAPIADEMSEVCTYFKLPHVLEPAKKYPRDWLVSGRIRVRLVRDDGSPENPDIPNRKTLMIKMAELIPKLQSRKVRLEKEAEEAK 167          
BLAST of mRNA_Ecto-sp13_S_contig8038.19367.1 vs. uniprot
Match: M4BW27_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BW27_HYAAE)

HSP 1 Score: 109 bits (273), Expect = 6.970e-27
Identity = 55/113 (48.67%), Postives = 79/113 (69.91%), Query Frame = 0
Query:   34 SKLIVIWPNNVDSTRTIKKGRRIPKASGCPSPTVEDMSQVLEFLQLWHAVEPYKAYPREPWVLGRVRVRLVDEDGVPWNPEVPDRPSLMKKMGELMPNLKSRIDRISKAKKDA 146
            S     +PN +DS RT+++GRRIPK+  C +P  ++MS+V  FL+L H +EP K YPR+  V GR+RVRLV EDG   NPE+P+R +L+ KM +L+P L+SR  R+ K  ++A
Sbjct:   52 SMFYTFYPNYLDSKRTVQQGRRIPKSMACEAPIADEMSEVCTFLKLPHVLEPTKKYPRDWLVAGRIRVRLVREDGSLENPELPNRKALILKMADLIPKLQSRKVRLEKEAEEA 164          
BLAST of mRNA_Ecto-sp13_S_contig8038.19367.1 vs. uniprot
Match: A0A6A3TTV6_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3TTV6_9STRA)

HSP 1 Score: 109 bits (272), Expect = 5.320e-26
Identity = 56/116 (48.28%), Postives = 82/116 (70.69%), Query Frame = 0
Query:   34 SKLIVIWPNNVDSTRTIKKGRRIPKASG--CPSPTVEDMSQVLEFLQLWHAVEPYKAYPREPWVLGRVRVRLVDEDGVPWNPEVPDRPSLMKKMGELMPNLKSRIDRISKAKKDAE 147
            + L+  +PN +DS +T+++GRRIP+A    C +P  ++MS+V  +L+L H +EP K YPR+  V GRVRVRLV +DG P NPEVP R +LM KM EL+P L+SR  R+ +  ++A+
Sbjct:  122 ASLMTFYPNYIDSKKTVQQGRRIPQAQAQACETPLADEMSEVCTYLKLPHVLEPAKKYPRDWLVSGRVRVRLVRDDGSPENPEVPTRKALMVKMAELIPKLQSRKLRLEREAEEAK 237          
BLAST of mRNA_Ecto-sp13_S_contig8038.19367.1 vs. uniprot
Match: D0MUF1_PHYIT (Transmembrane protein, putative n=13 Tax=Phytophthora TaxID=4783 RepID=D0MUF1_PHYIT)

HSP 1 Score: 108 bits (269), Expect = 1.600e-25
Identity = 51/114 (44.74%), Postives = 79/114 (69.30%), Query Frame = 0
Query:   34 SKLIVIWPNNVDSTRTIKKGRRIPKASGCPSPTVEDMSQVLEFLQLWHAVEPYKAYPREPWVLGRVRVRLVDEDGVPWNPEVPDRPSLMKKMGELMPNLKSRIDRISKAKKDAE 147
            S  +  +PN +D  +T+++GRRIPK S C +P  ++MS+V  + +L H +EP K YPR+  V GR+RVRL+ +DG P N ++P+R +LM KM EL+P L+SR  R+ K  ++A+
Sbjct:  129 STFMTFYPNYIDDKKTVQQGRRIPKLSACEAPIADEMSEVCTYFKLPHVLEPAKKYPRDWLVSGRIRVRLLRDDGTPENADIPNRKTLMIKMAELIPKLQSRKVRLEKEAEEAK 242          
BLAST of mRNA_Ecto-sp13_S_contig8038.19367.1 vs. uniprot
Match: A0A1V9ZNX3_9STRA (Transmembrane protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZNX3_9STRA)

HSP 1 Score: 107 bits (268), Expect = 2.970e-25
Identity = 56/119 (47.06%), Postives = 76/119 (63.87%), Query Frame = 0
Query:   32 DVSKLIVIWPNNVDSTRTIKKGRRIPKASGCPSPTVEDMSQVLEFLQLWHAVEPYKAYPREPWVLGRVRVRLVDEDGVPWNPEVPDRPSLMKKMGELMPNLKSRIDRISKAKKDAEALA 150
            D  +    +PN +DS +T   GRRIPKA  C  P VE+M++V  + +L H +EP+KAY RE  V GRVRV+L D +G P N +V  R  LM KMGEL+P L+ R DR+ +  + A+A A
Sbjct:  142 DFKRWATFYPNYIDSDKTNAMGRRIPKAMACDRPIVEEMAEVCRYFKLDHVIEPHKAYSRESLVAGRVRVKLTDANGKPCNSDVRTRKELMLKMGELIPKLQLRKDRLQRELEAAKAPA 260          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8038.19367.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKK4_ECTSI1.150e-10498.32Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CKP4_9STRA3.060e-3644.83Signal recognition particle, SRP19 subunit n=1 Tax... [more]
A0A7S2B120_9STRA2.200e-3247.33Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A6V2W292_HETAK1.620e-3047.58Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2SLH7_9STRA1.520e-2946.88Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A8J5IME7_9STRA1.900e-2745.61Uncharacterized protein n=1 Tax=Phytophthora aleat... [more]
M4BW27_HYAAE6.970e-2748.67Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A6A3TTV6_9STRA5.320e-2648.28Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
D0MUF1_PHYIT1.600e-2544.74Transmembrane protein, putative n=13 Tax=Phytophth... [more]
A0A1V9ZNX3_9STRA2.970e-2547.06Transmembrane protein n=1 Tax=Achlya hypogyna TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 136..156
NoneNo IPR availablePANTHERPTHR17453:SF0SIGNAL RECOGNITION PARTICLE 19 KDA PROTEINcoord: 29..177
IPR002778Signal recognition particle, SRP19 subunitPFAMPF01922SRP19coord: 38..130
e-value: 1.0E-22
score: 80.8
IPR002778Signal recognition particle, SRP19 subunitPANTHERPTHR17453SIGNAL RECOGNITION PARTICLE 19 KD PROTEINcoord: 29..177
IPR036521Signal recognition particle, subunit SRP19-like superfamilyGENE3D3.30.56.30coord: 23..145
e-value: 7.7E-31
score: 108.9
IPR036521Signal recognition particle, subunit SRP19-like superfamilySUPERFAMILY69695SRP19coord: 29..134

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8038contigEcto-sp13_S_contig8038:3835..6287 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8038.19367.1mRNA_Ecto-sp13_S_contig8038.19367.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8038 3832..6932 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8038.19367.1 ID=prot_Ecto-sp13_S_contig8038.19367.1|Name=mRNA_Ecto-sp13_S_contig8038.19367.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=180bp
MANFEDGMPTPYIPPDKNTLYVRPAEALRRMDVSKLIVIWPNNVDSTRTI
KKGRRIPKASGCPSPTVEDMSQVLEFLQLWHAVEPYKAYPREPWVLGRVR
VRLVDEDGVPWNPEVPDRPSLMKKMGELMPNLKSRIDRISKAKKDAEALA
RAEKEKAAAAVAAASQSNMKKKGKKKGKR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002778Signal_recog_particle_SRP19
IPR036521SRP19-like_sf