prot_Ecto-sp13_S_contig8016.19334.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8016.19334.1
Unique Nameprot_Ecto-sp13_S_contig8016.19334.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length186
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8016.19334.1 vs. uniprot
Match: D7FI79_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI79_ECTSI)

HSP 1 Score: 225 bits (574), Expect = 7.520e-65
Identity = 128/156 (82.05%), Postives = 133/156 (85.26%), Query Frame = 0 
Query:   24 LTAVGLGSVGNQENRDSEVRGLRARLMSLRYLLDTFLALEGEQGRAFDADGLREFLDLGAEGSKKGSRDGGAEETAWENFPYRRDALRRSLMGFARKGEASAVGVLMERHPLETLPARLEALSALPETLDPRSYASLLPCCGVVAPTASSASAAGV 179
            +TAVGLGS G++   DSEVR LRARLMSLRYLLDTFLALEGEQGR FD  GLREFL LG       S DGGAEE AWE+FPYRRD LRRSLMGFARKG+ASAVGVLMERHPLETLPARLEALSALPETLDPR YASLLPCCG VA TAS ASAAGV
Sbjct:  783 VTAVGLGSAGDEG--DSEVRRLRARLMSLRYLLDTFLALEGEQGRGFDVGGLREFLGLG-------SGDGGAEERAWEDFPYRRDNLRRSLMGFARKGKASAVGVLMERHPLETLPARLEALSALPETLDPRLYASLLPCCGAVALTAS-ASAAGV 928
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BLAST of mRNA_Ecto-sp13_S_contig8016.19334.1 vs. uniprot
Match: A0A6H5JI52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI52_9PHAE)

HSP 1 Score: 210 bits (534), Expect = 8.190e-62
Identity = 109/122 (89.34%), Postives = 113/122 (92.62%), Query Frame = 0 
Query:   24 LTAVGLGSVGNQENRDSEVRGLRARLMSLRYLLDTFLALEGEQGRAFDADGLREFLDLGAEGSKKGSRDGGAEETAWENFPYRRDALRRSLMGFARKGEASAVGVLMERHPLETLPARLEAL 145
            + AVGLGS G++ +RDSEVR LRARLMSLRYLLDTFLALEGEQG AFDADGLREFL  GAEGSKKG  DGGAEETAWENFPYRRDALRRSLMGFARKGEASAVGVLMERHPLETLPARLEAL
Sbjct:  163 VAAVGLGSAGDEGDRDSEVRRLRARLMSLRYLLDTFLALEGEQGCAFDADGLREFLGRGAEGSKKGLGDGGAEETAWENFPYRRDALRRSLMGFARKGEASAVGVLMERHPLETLPARLEAL 284
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BLAST of mRNA_Ecto-sp13_S_contig8016.19334.1 vs. uniprot
Match: A0A2V0PEG0_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PEG0_9CHLO)

HSP 1 Score: 53.5 bits (127), Expect = 5.660e-5
Identity = 27/53 (50.94%), Postives = 35/53 (66.04%), Query Frame = 0 
Query:  110 LRRSLMGFARKGEASAVGVLMERHPLETLPARLEALSALPETLDPRSYASLLP 162
            L  + +  A  G A+A+G L+ RHP    P  L  LSALPETLDPR+Y++LLP
Sbjct:  676 LPAAALAVASTGNAAALGALIARHPAALGPHLLRILSALPETLDPRTYSALLP 728
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8016.19334.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FI79_ECTSI7.520e-6582.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JI52_9PHAE8.190e-6289.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2V0PEG0_9CHLO5.660e-550.94Uncharacterized protein n=1 Tax=Raphidocelis subca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8016contigEcto-sp13_S_contig8016:654..2095 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8016.19334.1mRNA_Ecto-sp13_S_contig8016.19334.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8016 654..2095 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8016.19334.1 ID=prot_Ecto-sp13_S_contig8016.19334.1|Name=mRNA_Ecto-sp13_S_contig8016.19334.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=186bp
MVLAGGGRAAGGRGGGMGGGGGGLTAVGLGSVGNQENRDSEVRGLRARLM
SLRYLLDTFLALEGEQGRAFDADGLREFLDLGAEGSKKGSRDGGAEETAW
ENFPYRRDALRRSLMGFARKGEASAVGVLMERHPLETLPARLEALSALPE
TLDPRSYASLLPCCGVVAPTASSASAAGVGSSAGAT
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