prot_Ecto-sp13_S_contig7995.19298.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7995.19298.1
Unique Nameprot_Ecto-sp13_S_contig7995.19298.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length168
Homology
BLAST of mRNA_Ecto-sp13_S_contig7995.19298.1 vs. uniprot
Match: D7G4N5_ECTSI (3'-5'-exoribonuclease/ RNA binding n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4N5_ECTSI)

HSP 1 Score: 334 bits (857), Expect = 5.480e-116
Identity = 166/168 (98.81%), Postives = 167/168 (99.40%), Query Frame = 0
Query:    1 MAIREGPWQSKNDHDFILRSLRGGRRADGRQLGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRPTEGFLHFNVELGPMAAVSMGEQRNSPLSVEIARVIEIGVRDSQALDTEALCIIGGEKVWQLRCDVHILDHGGNLIDACTLATMAALRHFRRP 168
            MAIREGPWQSKNDHDFILRSLRGGRRADGRQLGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRPTEGFLHFNVELGPMAA S+GEQRNSPLSVEIARVIEIGVRDSQALDTEALCIIGGEKVWQLRCDVHILDHGGNLIDACTLATMAALRHFRRP
Sbjct:    1 MAIREGPWQSKNDHDFILRSLRGGRRADGRQLGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRPTEGFLHFNVELGPMAAASVGEQRNSPLSVEIARVIEIGVRDSQALDTEALCIIGGEKVWQLRCDVHILDHGGNLIDACTLATMAALRHFRRP 168          
BLAST of mRNA_Ecto-sp13_S_contig7995.19298.1 vs. uniprot
Match: A0A6H5KDM4_9PHAE (RNase_PH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDM4_9PHAE)

HSP 1 Score: 314 bits (804), Expect = 3.240e-102
Identity = 159/168 (94.64%), Postives = 162/168 (96.43%), Query Frame = 0
Query:    1 MAIREGPWQSKNDHDFILRSLRGGRRADGRQLGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRPTEGFLHFNVELGPMAAVSMGEQRNSPLSVEIARVIEIGVRDSQALDTEALCIIGGEKVWQLRCDVHILDHGGNLIDACTLATMAALRHFRRP 168
            MAIREGPWQSKND++FILRSLRGGRR DGR+LGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRP EGFLHFNVELGPMAA SMGEQRNSPLSVEIARVIEIGVRDSQALDTEALCIIGGEK   LRCDVHILDHGGNLIDACTLATMAALRHFRRP
Sbjct:    1 MAIREGPWQSKNDYEFILRSLRGGRRVDGRELGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRPMEGFLHFNVELGPMAAASMGEQRNSPLSVEIARVIEIGVRDSQALDTEALCIIGGEK---LRCDVHILDHGGNLIDACTLATMAALRHFRRP 165          
BLAST of mRNA_Ecto-sp13_S_contig7995.19298.1 vs. uniprot
Match: A0A835ZEC1_9STRA (Ribosomal protein S5 domain 2-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEC1_9STRA)

HSP 1 Score: 207 bits (527), Expect = 1.070e-61
Identity = 105/169 (62.13%), Postives = 129/169 (76.33%), Query Frame = 0
Query:    1 MAIREGPWQSKNDHDFILRSLRGGR-RADGRQLGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRPTEGFLHFNVELGPMAAVSMGEQRNSPLSVEIARVIEIGVRDSQALDTEALCIIGGEKVWQLRCDVHILDHGGNLIDACTLATMAALRHFRRP 168
            MAIR+G   + N + F+L +LRGG+ R DGR+L  +R +   F R+EGQAS  +Q GRT+ L VV+ EVVPP+PDRPT+G L FNVEL  MA  S+G  R SPL+ EI R+IE G+RDSQALDTE LCI+ GEKVWQLR DVHILD+GGNL+DA  LA +AAL+HFRRP
Sbjct:    1 MAIRDGFTHTINTNAFVLETLRGGKQRIDGRELNTLRQIAFQFTRSEGQASVLVQWGRTQTLAVVSAEVVPPYPDRPTDGALMFNVELSKMAEASVGLLRASPLATEITRIIERGIRDSQALDTETLCIVAGEKVWQLRVDVHILDNGGNLVDAAALAAIAALQHFRRP 169          
BLAST of mRNA_Ecto-sp13_S_contig7995.19298.1 vs. uniprot
Match: K3X4Z2_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X4Z2_GLOUD)

HSP 1 Score: 193 bits (491), Expect = 2.020e-56
Identity = 96/171 (56.14%), Postives = 128/171 (74.85%), Query Frame = 0
Query:    1 MAIREG-PWQSKNDHDFILRSLRGGR--RADGRQLGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRPTEGFLHFNVELGPMAAVSMGEQRNSPLSVEIARVIEIGVRDSQALDTEALCIIGGEKVWQLRCDVHILDHGGNLIDACTLATMAALRHFRRP 168
            MAIRE   + S+N+  F+  S+      RADGR+L   R +R+ F R E Q+ AE+QLGRTRV+  V GE+VPPFPDRPTEGFLHFNVEL PMA+ +    R SP++VE+AR+++ G+R+ +ALDTEAL II GEKVW + C++H++DHGGNLID  +LA +AA+ H+RRP
Sbjct:    1 MAIREEHDFLSENERKFLFDSIHDAPHVRADGRELMHQRKIRVQFRRTEEQSQAEVQLGRTRVIANVHGEIVPPFPDRPTEGFLHFNVELSPMASQNFEVGRPSPMAVELARIVDRGIRECRALDTEALAIIAGEKVWAITCNIHVVDHGGNLIDCVSLAAIAAMMHYRRP 171          
BLAST of mRNA_Ecto-sp13_S_contig7995.19298.1 vs. uniprot
Match: A0A8K1C7Y8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C7Y8_PYTOL)

HSP 1 Score: 192 bits (487), Expect = 5.790e-56
Identity = 95/171 (55.56%), Postives = 128/171 (74.85%), Query Frame = 0
Query:    1 MAIREG-PWQSKNDHDFILRSLRGGR--RADGRQLGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRPTEGFLHFNVELGPMAAVSMGEQRNSPLSVEIARVIEIGVRDSQALDTEALCIIGGEKVWQLRCDVHILDHGGNLIDACTLATMAALRHFRRP 168
            MAIRE   + S+N+  F+  S+      RADGR+L   R +R+ F R + Q+ AE+QLGRTRV+  V GE+VPPFPDRPTEGFLHF+VEL PMA+ +    R SPL+VE+AR+++ G+R+ +ALDTEAL I+ GEKVW + C++H++DHGGNLID  +LA +AA+ HFRRP
Sbjct:    1 MAIREEYDFVSENERKFLFDSIHDKPHIRADGRELMQQRKIRVQFRRMDDQSQAEVQLGRTRVIANVHGEIVPPFPDRPTEGFLHFSVELSPMASQNFEVGRPSPLAVELARIVDRGIRECRALDTEALAIVAGEKVWSITCNIHVVDHGGNLIDCVSLAAIAAMMHFRRP 171          
BLAST of mRNA_Ecto-sp13_S_contig7995.19298.1 vs. uniprot
Match: A0A7S1CIZ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CIZ9_9STRA)

HSP 1 Score: 184 bits (467), Expect = 1.240e-55
Identity = 91/158 (57.59%), Postives = 116/158 (73.42%), Query Frame = 0
Query:   10 SKNDHDFILRSLRGGRRADGRQLGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRPTEGFLHFNVELGPMAAVSMGEQRNSPLSVEIARVIEIGVRDSQALDTEALCIIGGEKVWQLRCDVHILDHGGNLIDACTLATMAALRHFRR 167
            S  + DFI  +LR GRR DGR L D R +   F R   + +AE++LG+TRV+ V T EVVPP+PDRPTEGFL FNVEL PMA+      R SPL+VEI R++E  +RD++A+DTEALCI+ GEKVW LRCDV ++D GGN+IDA  L+ +A+L HFRR
Sbjct:    4 SNVERDFIHHALRSGRRVDGRGLLDRRRVAFKFDRTAARTTAEVRLGKTRVVTVTTAEVVPPYPDRPTEGFLMFNVELSPMASEKFEAGRPSPLAVEIGRIVERCLRDARAIDTEALCIVAGEKVWSLRCDVRVVDDGGNIIDAAALSAVASLCHFRR 161          
BLAST of mRNA_Ecto-sp13_S_contig7995.19298.1 vs. uniprot
Match: I2CP19_NANGC (Exosome complex component RRP45 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=I2CP19_NANGC)

HSP 1 Score: 192 bits (487), Expect = 6.360e-55
Identity = 99/168 (58.93%), Postives = 122/168 (72.62%), Query Frame = 0
Query:    2 AIREGPWQSKNDHDFILRSLRGGR-RADGRQLGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRPTEGFLHFNVELGPMAAVSMGEQRNSPLSVEIARVIEIGVRDSQALDTEALCIIGGEKVWQLRCDVHILDHGGNLIDACTLATMAALRHFRRP 168
             I++G   S N+ +FIL +L+    RADGR   D R LR+ +ARAEGQA+AEIQLG+TRVL VVT E+ PP+PDRP EGFL+ NVE  PMA + +   R +P  VE+ RVIE  +R S+ALDTEALC+I G KVW LRCDV ILD  GN++DA  LAT+AAL HFR P
Sbjct:    3 VIKQGEDMSINEREFILTALKDENCRADGRTPADTRELRVTYARAEGQATAEIQLGKTRVLTVVTSELTPPYPDRPAEGFLNLNVEYSPMATLGIDNARTNPTLVEVDRVIERCLRQSRALDTEALCVIAGSKVWSLRCDVRILDDAGNVVDAACLATVAALMHFRLP 170          
BLAST of mRNA_Ecto-sp13_S_contig7995.19298.1 vs. uniprot
Match: A0A2D4C8I4_PYTIN (Exosome complex exonuclease RRP45-like protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C8I4_PYTIN)

HSP 1 Score: 189 bits (479), Expect = 9.770e-55
Identity = 92/171 (53.80%), Postives = 126/171 (73.68%), Query Frame = 0
Query:    1 MAIREG-PWQSKNDHDFILRSLRGGR--RADGRQLGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRPTEGFLHFNVELGPMAAVSMGEQRNSPLSVEIARVIEIGVRDSQALDTEALCIIGGEKVWQLRCDVHILDHGGNLIDACTLATMAALRHFRRP 168
            MAIRE   + S+N+  F+  S+      R DGR+L   R +R+ F R + Q+ AE+Q+GRTRV+  V GE+VPPFPDRPTEGFLHFNVEL PMA+ +    R SPL++E+AR+++ G+R+ +ALDTEAL I+ GEKVW + C +H++DHGGNLID  +LA +AA+ H+RRP
Sbjct:    1 MAIREEHDFLSENERAFLFHSIHDKPHIRPDGRELMQQRKIRVQFRRNDDQSQAEVQIGRTRVIANVHGEIVPPFPDRPTEGFLHFNVELSPMASQNFEVGRPSPLAIELARIVDRGIRECRALDTEALAIVAGEKVWSITCTIHVVDHGGNLIDCVSLAAIAAMMHYRRP 171          
BLAST of mRNA_Ecto-sp13_S_contig7995.19298.1 vs. uniprot
Match: A0A3M6VKF7_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VKF7_9STRA)

HSP 1 Score: 186 bits (473), Expect = 1.200e-53
Identity = 95/178 (53.37%), Postives = 129/178 (72.47%), Query Frame = 0
Query:    1 MAIREG-PWQSKNDHDFILRSLRGGR--RADGRQLGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRPTEGFLHFNVELGPMAAVSMGEQRN-------SPLSVEIARVIEIGVRDSQALDTEALCIIGGEKVWQLRCDVHILDHGGNLIDACTLATMAALRHFRRP 168
            MA+R+   + S+N+  F+   LR     RADGR+L   R +R+ F R+E ++ AE+QLGRTRV+G V GE+VPPFPDRPTEGFLHF+VEL PMA+ S     +       S ++ E+AR++E GVR+S+ALDTEAL ++ GEKVW + C VH++DHGGNL+DA +LA +AAL H+RRP
Sbjct:    1 MALRDDHDFLSENERQFLANCLRQSPHVRADGRELLQQRKIRVQFRRSESESQAEVQLGRTRVIGNVHGEIVPPFPDRPTEGFLHFSVELSPMASPSFDASSSASRGAASSVVAAELARLVERGVRESRALDTEALAVVAGEKVWAITCHVHVVDHGGNLVDAASLAAIAALMHYRRP 178          
BLAST of mRNA_Ecto-sp13_S_contig7995.19298.1 vs. uniprot
Match: G4ZFL2_PHYSP (Uncharacterized protein n=8 Tax=Phytophthora TaxID=4783 RepID=G4ZFL2_PHYSP)

HSP 1 Score: 184 bits (466), Expect = 1.310e-52
Identity = 98/178 (55.06%), Postives = 128/178 (71.91%), Query Frame = 0
Query:    1 MAIR-EGPWQSKNDHDFILRSLRGGR--RADGRQLGDMRLLRMVFARAEGQASAEIQLGRTRVLGVVTGEVVPPFPDRPTEGFLHFNVELGPMA------AVSMGE-QRNSPLSVEIARVIEIGVRDSQALDTEALCIIGGEKVWQLRCDVHILDHGGNLIDACTLATMAALRHFRRP 168
            MA+R E  + S+N+  F+   LR     RADGR+L   R +R+ F R+E ++ AE+QLGRTRV+G V GE+VPPFPDRPTEGFLHF VEL PMA      A S G    +S  + E+AR++E GVR+S+ALDTEAL ++ GEKVW + C VH++DHGGNL+DA +LA +AAL H+RRP
Sbjct:    1 MALRDEHDFLSENERQFLANCLRQPPHVRADGRELLQQRKIRVQFRRSETESQAEVQLGRTRVIGNVHGEIVPPFPDRPTEGFLHFAVELSPMASPSFEAAASAGRGAASSVAAAELARLVERGVRESRALDTEALAVVAGEKVWAITCHVHVVDHGGNLVDAASLAAIAALMHYRRP 178          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7995.19298.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4N5_ECTSI5.480e-11698.813'-5'-exoribonuclease/ RNA binding n=1 Tax=Ectocar... [more]
A0A6H5KDM4_9PHAE3.240e-10294.64RNase_PH domain-containing protein n=1 Tax=Ectocar... [more]
A0A835ZEC1_9STRA1.070e-6162.13Ribosomal protein S5 domain 2-type protein n=1 Tax... [more]
K3X4Z2_GLOUD2.020e-5656.14Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A8K1C7Y8_PYTOL5.790e-5655.56Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S1CIZ9_9STRA1.240e-5557.59Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
I2CP19_NANGC6.360e-5558.93Exosome complex component RRP45 n=3 Tax=Monodopsid... [more]
A0A2D4C8I4_PYTIN9.770e-5553.80Exosome complex exonuclease RRP45-like protein n=1... [more]
A0A3M6VKF7_9STRA1.200e-5353.37Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
G4ZFL2_PHYSP1.310e-5255.06Uncharacterized protein n=8 Tax=Phytophthora TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001247Exoribonuclease, phosphorolytic domain 1PFAMPF01138RNase_PHcoord: 43..168
e-value: 1.6E-18
score: 67.5
IPR027408PNPase/RNase PH domain superfamilyGENE3D3.30.230.70coord: 8..168
e-value: 2.8E-51
score: 176.5
NoneNo IPR availablePANTHERPTHR11097:SF14EXOSOME COMPLEX COMPONENT RRP45coord: 10..168
NoneNo IPR availablePANTHERPTHR11097EXOSOME COMPLEX EXONUCLEASE RIBOSOMAL RNA PROCESSING PROTEINcoord: 10..168
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 8..168

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7995contigEcto-sp13_S_contig7995:3472..7066 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7995.19298.1mRNA_Ecto-sp13_S_contig7995.19298.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7995 3472..7066 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7995.19298.1 ID=prot_Ecto-sp13_S_contig7995.19298.1|Name=mRNA_Ecto-sp13_S_contig7995.19298.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=168bp
MAIREGPWQSKNDHDFILRSLRGGRRADGRQLGDMRLLRMVFARAEGQAS
AEIQLGRTRVLGVVTGEVVPPFPDRPTEGFLHFNVELGPMAAVSMGEQRN
SPLSVEIARVIEIGVRDSQALDTEALCIIGGEKVWQLRCDVHILDHGGNL
IDACTLATMAALRHFRRP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001247ExoRNase_PH_dom1
IPR027408PNPase/RNase_PH_dom_sf
IPR020568Ribosomal_S5_D2-typ_fold