prot_Ecto-sp13_S_contig7981.19279.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7981.19279.1
Unique Nameprot_Ecto-sp13_S_contig7981.19279.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length266
Homology
BLAST of mRNA_Ecto-sp13_S_contig7981.19279.1 vs. uniprot
Match: D7G1M6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1M6_ECTSI)

HSP 1 Score: 520 bits (1340), Expect = 1.560e-178
Identity = 260/263 (98.86%), Postives = 261/263 (99.24%), Query Frame = 0
Query:    1 SKRRVRKATKAVQEDKGEYVMQADLNEVFVGPVFDFTTRYSYLLTLLFTAMAYSGGMFAMNALSFAFFFITYWVDKAMLLRYYRRPPHREDALQQQVNNTLPWALLLHLCFTCWFLGTESLKSEVITESISQVTPYEDVIASYEEGYGILVSRIIRTNVFPLFLLTLGVLVWCVLEFLNGYFPLFVILGKGFRFVLGSCTGKKRTLEVMRPGKKIRSRWTSEVAAYTDVYYQYIPKNGDLTTAEKLEGWMVSHLADKSVVKKK 263
            SKRR+RKATKAVQEDKGEYVMQ DLNEVFVGPVFDFTTRYSYLLTLLFTAMAYSGGMFAMNALSFAFFFITYWVDKAMLLRYYRRPPHREDALQQQVNNTLPWALLLHLCFTCWFLGTESLKSEVITESISQV PYEDVIASYEEGYGILVSRIIRTNVFPLFLLTLGVLVWCVLEFLNGYFPLFVILGKGFRFVLGSCTGKKRTLEVMRPGKKIRSRWTSEVAAYTDVYYQYIPKNGDLTTAEKLEGWMVSHLADKSVVKKK
Sbjct:  404 SKRRIRKATKAVQEDKGEYVMQGDLNEVFVGPVFDFTTRYSYLLTLLFTAMAYSGGMFAMNALSFAFFFITYWVDKAMLLRYYRRPPHREDALQQQVNNTLPWALLLHLCFTCWFLGTESLKSEVITESISQVKPYEDVIASYEEGYGILVSRIIRTNVFPLFLLTLGVLVWCVLEFLNGYFPLFVILGKGFRFVLGSCTGKKRTLEVMRPGKKIRSRWTSEVAAYTDVYYQYIPKNGDLTTAEKLEGWMVSHLADKSVVKKK 666          
BLAST of mRNA_Ecto-sp13_S_contig7981.19279.1 vs. uniprot
Match: A0A7S1CHI6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CHI6_9STRA)

HSP 1 Score: 103 bits (257), Expect = 7.600e-23
Identity = 65/177 (36.72%), Postives = 100/177 (56.50%), Query Frame = 0
Query:    1 SKRRVRKATKAVQEDKGEYVMQADLNEVFVGPVFDFTTRYSYLLTLLFTAMAYSGGMFAMNALSFAFFFITYWVDKAMLLRYYRRPPHREDALQQQVNNTLPWALLLHLCFTCWFLGTESL-KSEVITESI-SQVTPYEDV--IASYE---------EGYGILVSRIIRTNVFPLFL 164
            S+ R RKA K      G Y+ Q+D+N+ FVG  FD + RY  L+  LFT + Y  GM  +  ++   F + +W+DK +LLRYY++PP  ++AL +Q  + +PWALL+HL    W +G +++ +S VI  +I S  T   +   +A YE         +G G +  +I+R   FP FL
Sbjct:   38 SRARRRKAQKV-----GSYLTQSDMNDAFVGAEFDLSIRYPELMNTLFTTLLYCAGMPYLLPMAVGSFVLRFWIDKILLLRYYKKPPAYDEALGKQAISWMPWALLMHLGVAFWMIGEDTIVRSLVINPAIVSDQTGNNEAESLALYERWKARSEAIDGIG-MTPKILRVASFPFFL 208          
BLAST of mRNA_Ecto-sp13_S_contig7981.19279.1 vs. uniprot
Match: A0A7S1G7Q3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G7Q3_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 1.500e-16
Identity = 72/250 (28.80%), Postives = 112/250 (44.80%), Query Frame = 0
Query:   22 QADLNEVFVGPVFDFTTRYSYLLTLLFTAMAYSGGMFAMNALSFAFFFITYWVDKAMLLRYYRRPPHREDALQQQVNNTLPWALLLHLCFTCWFLGTES-LKSEVITESISQVTPYEDVIASYEEGYGILVSR----------------IIRTNVFPLFLLTLGVLVWCVLEFLNGYFPLFVILGKGFRFVLGSCTGKKRTLEVMRPGKKIRSRWTSEVAA---YTDVYYQYIPKNGDLTTAEKLEGWMV 251
            Q  L+  + GP FD   ++S +L   F  + Y+GGM  +  ++   F   Y +DK  LLR Y  PP+ ++ L +   + L +A+L HL  +CW  G    L+SE++T S+        + A       +  +R                I+R NVFPLFLL + +L+W V  ++        I+G   R  LG    +  T  V+  G K +    SE      YT V+  Y+     LT  E   GW++
Sbjct:  787 QQALDRFYAGPAFDIAVQHSLILNTSFACLFYAGGMPILLPIACMAFTFMYLLDKYTLLRVYSMPPNFDETLTRDALHLLRYAILAHLALSCWMYGNNDVLRSELVTSSVLSDNSGGAISADEATEVALAYTRFVNQTAPFDPLSIGPKILRANVFPLFLLFVLILLWVVYGWVRA------IVGPILRVFLGRVV-RCLTCGVLC-GNKAKVANESEAYGMHKYTGVFGMYVDGRTRLTEDEMNRGWIL 1028          
BLAST of mRNA_Ecto-sp13_S_contig7981.19279.1 vs. uniprot
Match: A0A5A8CWX6_CAFRO (Rieske domain-containing protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CWX6_CAFRO)

HSP 1 Score: 83.6 bits (205), Expect = 1.960e-14
Identity = 53/165 (32.12%), Postives = 93/165 (56.36%), Query Frame = 0
Query:   20 VMQADLNEVFVGPVFDFTTRYSYLLTLLFTAMAYSGGMFAMNALSFAFFFITYWVDKAMLLRYYRRPPHREDALQQQVNNTLPWALLLHLCFTCWFLGTESLKSEVITESISQVTPYEDVIASYEEGYGIL---VSRIIRTNVFPLFLLTLGVLVWCVL-EFLNG 180
            V Q  LN  F GP F   TRY+ ++  +F  + +   +  +  ++F    ++++VDK +LLR+YR PPH +  L + + + +PWA+ LHL FT + + T ++ + V  +    V  + DV ++     G L   V R+ +T+VF L +  L VL++ VL +F++G
Sbjct: 1206 VSQRQLNSWFEGPQFHLDTRYATIMQSVFVTLLFGAVLPLLVPIAFFGMLLSFYVDKWLLLRFYRIPPHYDVHLGRALTSWIPWAIFLHLGFTAYAMSTPAIFASVAAD----VGVFGDVTSAAAASSGTLRELVQRLQQTHVFSLTVAALAVLLFTVLSKFVSG 1366          
BLAST of mRNA_Ecto-sp13_S_contig7981.19279.1 vs. uniprot
Match: A0A5A8EL67_CAFRO (DNA polymerase II subunit 2 n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EL67_CAFRO)

HSP 1 Score: 83.6 bits (205), Expect = 2.030e-14
Identity = 53/165 (32.12%), Postives = 93/165 (56.36%), Query Frame = 0
Query:   20 VMQADLNEVFVGPVFDFTTRYSYLLTLLFTAMAYSGGMFAMNALSFAFFFITYWVDKAMLLRYYRRPPHREDALQQQVNNTLPWALLLHLCFTCWFLGTESLKSEVITESISQVTPYEDVIASYEEGYGIL---VSRIIRTNVFPLFLLTLGVLVWCVL-EFLNG 180
            V Q  LN  F GP F   TRY+ ++  +F  + +   +  +  ++F    ++++VDK +LLR+YR PPH +  L + + + +PWA+ LHL FT + + T ++ + V  +    V  + DV ++     G L   V R+ +T+VF L +  L VL++ VL +F++G
Sbjct: 1938 VSQRQLNSWFEGPQFHLDTRYATIMQSVFVTLLFGAVLPLLVPIAFFGMLLSFYVDKWLLLRFYRIPPHYDVHLGRALTSWIPWAIFLHLGFTAYAMSTPAIFASVAAD----VGVFGDVTSAAAASSGTLRELVQRLQQTHVFSLTVAALAVLLFTVLSKFVSG 2098          
BLAST of mRNA_Ecto-sp13_S_contig7981.19279.1 vs. uniprot
Match: A0A7S1CHA1_9STRA (Hypothetical protein n=2 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CHA1_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 2.580e-14
Identity = 44/134 (32.84%), Postives = 72/134 (53.73%), Query Frame = 0
Query:   20 VMQADLNEVFVGPVFDFTTRYSYLLTLLFTAMAYSGGMFAMNALSFAFFFITYWVDKAMLLRYYRRPPHREDALQQQVNNTLPWALLLHLCFTCWFLGTESL-KSEVITESISQVTPYEDVIASYEEGYGILVS 152
            V Q+ L  +++GP F    RYS  +  ++ A +YS GM  +  L+  FFF+T+WVDK + +R+YRRPP  + ++ +     +PWA+++H     W L    +  S  I   I  VT  +   A+ +    +LVS
Sbjct:  977 VTQSHLEHLYLGPEFHLADRYSQAVMTIWVAFSYSAGMPLLLPLAACFFFVTFWVDKILFVRFYRRPPTYDASIARSAAALMPWAIVVHFVVGTWMLSNPGVFVSSNIVAGIVGVTGGDGAGAAEDVENALLVS 1110          
BLAST of mRNA_Ecto-sp13_S_contig7981.19279.1 vs. uniprot
Match: A0A7S2AL95_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AL95_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 2.420e-13
Identity = 44/124 (35.48%), Postives = 68/124 (54.84%), Query Frame = 0
Query:    9 TKAVQEDKGEYVMQADLNEVFVGPVFDFTTRYSYLLTLLFTAMAYSGGMFAMNALSFAFFFITYWVDKAMLLRYYRRPPHREDALQQQVNNTLPWALLLHLCFTCW-FLGTESLKSEVITESIS 131
            T+ ++   G  V Q  LNE F G  F+  TRY+++L   F  + Y GG+  +   +   FFITY VDK +++RY  +PP  + AL    +  LP A++LH+  T + F   E L+S    E++S
Sbjct:   50 TRWLKVKTGSAVTQTQLNEAFEGGEFEIDTRYAFILNFTFIVLFYGGGIPVLYLFAMLNFFITYCVDKLLVVRYLDQPPMYDSALAASFSKLLPMAVILHIGNTGFMFSNGEILRSNPFNENLS 173          
BLAST of mRNA_Ecto-sp13_S_contig7981.19279.1 vs. uniprot
Match: A0A7S3G076_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3G076_9EUKA)

HSP 1 Score: 72.8 bits (177), Expect = 2.260e-12
Identity = 30/91 (32.97%), Postives = 54/91 (59.34%), Query Frame = 0
Query:   24 DLNEVFVGPVFDFTTRYSYLLTLLFTAMAYSGGMFAMNALSFAFFFITYWVDKAMLLRYYRRPPHREDALQQQVNNTLPWALLLHLCFTCW 114
            +LN++++GP F    R    L ++F A+ YS G      +     F+ YW+DK ++LR+YR+P    +++ ++++  LPWA+ +HL F  W
Sbjct:   45 ELNKLYLGPDFRIADRLGVNLMIVFAALLYSAGNALFYFIGALVLFLVYWIDKILVLRFYRKPRGFNESISRRLSYVLPWAVFIHLVFAMW 135          
BLAST of mRNA_Ecto-sp13_S_contig7981.19279.1 vs. uniprot
Match: A0A7S3CVV1_9EUKA (Hypothetical protein n=4 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3CVV1_9EUKA)

HSP 1 Score: 77.0 bits (188), Expect = 2.930e-12
Identity = 33/99 (33.33%), Postives = 58/99 (58.59%), Query Frame = 0
Query:   16 KGEYVMQADLNEVFVGPVFDFTTRYSYLLTLLFTAMAYSGGMFAMNALSFAFFFITYWVDKAMLLRYYRRPPHREDALQQQVNNTLPWALLLHLCFTCW 114
            KG+   Q +LN++++GP F    R    L ++F A+ YS G      +     F+ YW+DK ++LR+YR+P    +++ ++++  LPWA+ +HL F  W
Sbjct:  709 KGKAKTQEELNKLYLGPDFRIADRLGVNLMIVFAALLYSAGNALFYFIGALVLFLVYWIDKILVLRFYRKPRGFNESISRRLSYVLPWAVFIHLVFAMW 807          
BLAST of mRNA_Ecto-sp13_S_contig7981.19279.1 vs. uniprot
Match: A0A812T674_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812T674_9DINO)

HSP 1 Score: 70.5 bits (171), Expect = 4.760e-10
Identity = 42/155 (27.10%), Postives = 80/155 (51.61%), Query Frame = 0
Query:   20 VMQADLNEVFVGPVFDFTTRYSYLLTLLFTAMAYSGGMFAMNALSFAFFFITYWVDKAMLLRYYRRPPHREDALQQQVNNTLPWALLLHLCFTCWFLGTES-LKSEVI----TESISQVTPYEDVIASYEEGYGI-LVSRIIRTNVFPLFLLTLG 168
            ++Q +LN+ +  P F+  +R  +++  +   + YS G+  +  ++      TY VD  +L  +Y +PP    ++ Q   N +P+AL+ H  F  WF G ++ ++S+ +       +     Y+  +AS E    I L  +++R NVFP+F+L L 
Sbjct:  582 ILQRELNDFYKAPEFEVESRVPHVMNTVVVTLLYSSGIPLLLPVAAVSLLTTYLVDVFLLSTFYAQPPPLNASMAQLAFNIMPFALMAHSAFAIWFYGDDATVESDPVLLGDAGGVGVQDRYQAAVASVEHLDPIGLAPKVLRQNVFPMFVLFLS 736          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7981.19279.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D7G1M6_ECTSI1.560e-17898.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1CHI6_9STRA7.600e-2336.72Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S1G7Q3_9STRA1.500e-1628.80Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A5A8CWX6_CAFRO1.960e-1432.12Rieske domain-containing protein n=1 Tax=Cafeteria... [more]
A0A5A8EL67_CAFRO2.030e-1432.12DNA polymerase II subunit 2 n=3 Tax=Cafeteria roen... [more]
A0A7S1CHA1_9STRA2.580e-1432.84Hypothetical protein n=2 Tax=Bicosoecida sp. CB-20... [more]
A0A7S2AL95_9STRA2.420e-1335.48Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S3G076_9EUKA2.260e-1232.97Hypothetical protein (Fragment) n=1 Tax=Palpitomon... [more]
A0A7S3CVV1_9EUKA2.930e-1233.33Hypothetical protein n=4 Tax=Palpitomonas bilix Ta... [more]
A0A812T674_9DINO4.760e-1027.10Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR13018:SF97coord: 4..134
NoneNo IPR availablePANTHERPTHR13018PROBABLE MEMBRANE PROTEIN DUF221-RELATEDcoord: 4..134
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 75..99
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 179..183
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 159..178
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 42..74
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 100..117
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 184..201
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 118..158
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..41
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 202..265
NoneNo IPR availableTMHMMTMhelixcoord: 162..184
NoneNo IPR availableTMHMMTMhelixcoord: 52..74
NoneNo IPR availableTMHMMTMhelixcoord: 100..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7981contigEcto-sp13_S_contig7981:322..2403 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7981.19279.1mRNA_Ecto-sp13_S_contig7981.19279.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7981 322..2403 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7981.19279.1 ID=prot_Ecto-sp13_S_contig7981.19279.1|Name=mRNA_Ecto-sp13_S_contig7981.19279.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=266bp
SKRRVRKATKAVQEDKGEYVMQADLNEVFVGPVFDFTTRYSYLLTLLFTA
MAYSGGMFAMNALSFAFFFITYWVDKAMLLRYYRRPPHREDALQQQVNNT
LPWALLLHLCFTCWFLGTESLKSEVITESISQVTPYEDVIASYEEGYGIL
VSRIIRTNVFPLFLLTLGVLVWCVLEFLNGYFPLFVILGKGFRFVLGSCT
GKKRTLEVMRPGKKIRSRWTSEVAAYTDVYYQYIPKNGDLTTAEKLEGWM
VSHLADKSVVKKKAS*
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