mRNA_Ecto-sp13_S_contig7976.19276.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7976.19276.1
Unique NamemRNA_Ecto-sp13_S_contig7976.19276.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7976.19276.1 vs. uniprot
Match: A0A6H5JUZ2_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUZ2_9PHAE)

HSP 1 Score: 410 bits (1054), Expect = 1.740e-135
Identity = 211/225 (93.78%), Postives = 214/225 (95.11%), Query Frame = 1 
Query:   28 EGKTLEDVEEEVVRLCAGEGAILSTAKSTRCRDGATDRVDMKKLICTRGGKSRQLEYEASLDTAPGVQRRNVKGSARTGCPFEVSVRHAKSHRWPRISNMKLTHNHSVDRKAIDVKLRLASKLTEEQLGQVKQMTSHGMKPKEVTKAMKALHEDSDIDINKRAVQNAAATVHGAEKPRDAADAYEEVMAATADGGVCEIKMDDSGRLTHIWWQTREQVGRWWRFG 702
            EGKTLEDVEEEVVRLC GEGAILSTAKSTRCRDGATDRVDMKKLICTRGGKSRQLEYEASLDTAPGVQRRNVK SART CP    VRHAKSHRWPRISNMKLTHNHSVDRKAIDVKLRLASKLTEEQLGQV+QMTSHGMKPKEVTKAMK LHEDSDIDINKRAVQNAAATVHGAEKPRDAADAYEEVMAATADGG+CEIKMDDSGRLTHIWWQTREQV  W R+G
Sbjct:   78 EGKTLEDVEEEVVRLCVGEGAILSTAKSTRCRDGATDRVDMKKLICTRGGKSRQLEYEASLDTAPGVQRRNVKRSARTDCP----VRHAKSHRWPRISNMKLTHNHSVDRKAIDVKLRLASKLTEEQLGQVQQMTSHGMKPKEVTKAMKVLHEDSDIDINKRAVQNAAATVHGAEKPRDAADAYEEVMAATADGGLCEIKMDDSGRLTHIWWQTREQVALWNRYG 298
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BLAST of mRNA_Ecto-sp13_S_contig7976.19276.1 vs. uniprot
Match: A0A6H5L586_9PHAE (FAR1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L586_9PHAE)

HSP 1 Score: 370 bits (949), Expect = 6.980e-128
Identity = 192/195 (98.46%), Postives = 193/195 (98.97%), Query Frame = 1 
Query:    1 KAKLEAVQTEGKTLEDVEEEVVRLCAGEGAILSTAKSTRCRDGATDRVDMKKLICTRGGKSRQLEYEASLDTAPGVQRRNVKGSARTGCPFEVSVRHAKSHRWPRISNMKLTHNHSVDRKAIDVKLRLASKLTEEQLGQVKQMTSHGMKPKEVTKAMKALHEDSDIDINKRAVQNAAATVHGAEKPRDAADAYEE 585
            KAKLEAVQTEGKTLEDVEEEVV  CAGEGAILSTAKSTRCRDGATDRVDMKKLICTRGGKSRQLEYEASLDTAPGVQRRNVKGSARTGCPFEVSVRHAKSHRWPRISNMKLTHNHSVDRKAIDVKLRLASKLTEEQLGQVKQMTSHGMKPKEVTKAMKA+HEDSDIDINKRAVQNAAATVHGAEKPRDAADAYEE
Sbjct:   16 KAKLEAVQTEGKTLEDVEEEVVSWCAGEGAILSTAKSTRCRDGATDRVDMKKLICTRGGKSRQLEYEASLDTAPGVQRRNVKGSARTGCPFEVSVRHAKSHRWPRISNMKLTHNHSVDRKAIDVKLRLASKLTEEQLGQVKQMTSHGMKPKEVTKAMKAIHEDSDIDINKRAVQNAAATVHGAEKPRDAADAYEE 210
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BLAST of mRNA_Ecto-sp13_S_contig7976.19276.1 vs. uniprot
Match: A0A6H5JK57_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK57_9PHAE)

HSP 1 Score: 366 bits (940), Expect = 3.310e-124
Identity = 190/233 (81.55%), Postives = 205/233 (87.98%), Query Frame = 1 
Query:    1 KAKLEAVQTEGKTLEDVEEEVVRLCAGEGAILSTAKSTRCRDGATDRVDMKKLICTRGGKSRQLEYEASLDTAPGVQRRNVKGSARTGCPFEVSVRHAKSHRWPRISNMKLTHNHSVDRKAIDVKLRLASKLTEEQLGQVKQMTSHGMKPKEVTKAMKALHEDSDIDINKRAVQNAAATVHGAEKPRDAADAYEEVMAATADGGVCEIKMDDSGRLTHIWWQTREQVGRWWRF 699
            K KLEAVQTEGK LEDV EEVVR CA EG +LSTAKSTRCRDG TDRVDMKKLICTRGG SRQLE+EA LDT PGV RRN KGSARTGC FEVSVRHAKSH  P+I+NMKL HNH VDR+A+ VKLRLA KLTEEQ GQV++MTS GMKPK V +A++ALHEDSDI+IN+RAVQN AA+VHGAEKPRDAADAYEEVMA TADGGVCEIKMDDSGRLTHIWWQTREQV  W R+
Sbjct:   19 KTKLEAVQTEGKILEDVVEEVVRTCAIEGVVLSTAKSTRCRDGGTDRVDMKKLICTRGGGSRQLEHEARLDTEPGVIRRNRKGSARTGCQFEVSVRHAKSHPRPKITNMKLGHNHVVDRQAMAVKLRLAGKLTEEQRGQVEKMTSKGMKPKAVHEAIQALHEDSDIEINRRAVQNVAASVHGAEKPRDAADAYEEVMAVTADGGVCEIKMDDSGRLTHIWWQTREQVALWNRY 251
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BLAST of mRNA_Ecto-sp13_S_contig7976.19276.1 vs. uniprot
Match: A0A6H5JAS6_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAS6_9PHAE)

HSP 1 Score: 359 bits (921), Expect = 3.140e-119
Identity = 185/230 (80.43%), Postives = 202/230 (87.83%), Query Frame = 1 
Query:   10 LEAVQTEGKTLEDVEEEVVRLCAGEGAILSTAKSTRCRDGATDRVDMKKLICTRGGKSRQLEYEASLDTAPGVQRRNVKGSARTGCPFEVSVRHAKSHRWPRISNMKLTHNHSVDRKAIDVKLRLASKLTEEQLGQVKQMTSHGMKPKEVTKAMKALHEDSDIDINKRAVQNAAATVHGAEKPRDAADAYEEVMAATADGGVCEIKMDDSGRLTHIWWQTREQVGRWWRF 699
            LEAVQTEGK LEDV EEVVR CA EG +LSTAKSTRCRDG TDRVDMKKLICTRGG SRQLE+EA LDT PGV RRN KGSARTGC FEVSVRHA SH  P+I+N+KL HNH VDR+A+ VKLRLA KLTEEQ GQV++MTS GMKPK V +A++ALHEDSDI+IN+RAVQN AA+VHGAEKPRDAADAYEEVMA TADGGVCEIKMDDSGRLTHIWWQTREQ+  W R+
Sbjct:   22 LEAVQTEGKILEDVVEEVVRTCAFEGVVLSTAKSTRCRDGGTDRVDMKKLICTRGGGSRQLEHEARLDTEPGVIRRNRKGSARTGCQFEVSVRHANSHPRPKITNIKLGHNHVVDRQAMAVKLRLAGKLTEEQRGQVEKMTSKGMKPKAVHEAIQALHEDSDIEINRRAVQNVAASVHGAEKPRDAADAYEEVMAVTADGGVCEIKMDDSGRLTHIWWQTREQMALWNRY 251
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BLAST of mRNA_Ecto-sp13_S_contig7976.19276.1 vs. uniprot
Match: A0A6H5JNB0_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNB0_9PHAE)

HSP 1 Score: 362 bits (929), Expect = 8.500e-118
Identity = 190/237 (80.17%), Postives = 206/237 (86.92%), Query Frame = 1 
Query:    1 KAKLEAVQTEGKTLEDVEEEVVRLCAGEGAILSTAKSTRCRDGATDRVDMKKLICTRGGKSRQLEYEASLDTAPGVQRRNVKGSARTGCPFEVSVRHAKSHRWPRISNMKLTHNHSVDRKAIDVKLRLASKLTEEQLGQVKQMTSH----GMKPKEVTKAMKALHEDSDIDINKRAVQNAAATVHGAEKPRDAADAYEEVMAATADGGVCEIKMDDSGRLTHIWWQTREQVGRWWRF 699
            K KLEAVQTEGKTLEDV EEVVR CA EG +LSTAKSTRCRDG TDRVDMKKLICTRGG SRQLE+EA LDT PGV RRN KGSARTGC FEVSVRHAKSH  P+I+NMKL HNH VDR+A+ VKLRLA KLTEEQ GQV++MTS     GMKPK V +A++ALHEDSDI+IN+RAVQN AA+VHGAEKPRDAADAYEEVMA TADGGVCEIKMDDSGRLTHIWWQTREQ+  W R+
Sbjct:   19 KTKLEAVQTEGKTLEDVVEEVVRTCAIEGVVLSTAKSTRCRDGGTDRVDMKKLICTRGGGSRQLEHEARLDTEPGVIRRNRKGSARTGCQFEVSVRHAKSHPRPKITNMKLGHNHVVDRQAMAVKLRLAGKLTEEQRGQVEKMTSEEIERGMKPKAVHEAIQALHEDSDIEINRRAVQNVAASVHGAEKPRDAADAYEEVMAVTADGGVCEIKMDDSGRLTHIWWQTREQMALWNRY 255
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BLAST of mRNA_Ecto-sp13_S_contig7976.19276.1 vs. uniprot
Match: A0A6H5KZF1_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZF1_9PHAE)

HSP 1 Score: 331 bits (848), Expect = 2.970e-107
Identity = 175/234 (74.79%), Postives = 191/234 (81.62%), Query Frame = 1 
Query:    1 KAKLEAVQTEGKTLEDVEEEVVRLCAGEGAILSTAKSTRCRDGATDRVDMKKLICTRGGKSRQLEYEASLDTAPGVQRRNVKGSARTGCPFEVSVRHAKSHRWPRISNMKLTHNHSVDRKAIDVKLRLASKLTEEQLGQVKQMTSHGMKPKEVTKAMKALHEDSDIDINKRAVQNAAATVHGAEKPRDAADAYEEVMAATADGGVCEIKMDDSGRLTHIWWQTREQVGRWWRFG 702
            K KLEAV TEGKT EDV EEVVR C GEGAILSTAKSTRCRDGATDRVD+KKLICTRGG  RQLEYEA LDT                    VS+RHA++H+WP+ISNMKL HNH V+R+AIDVKLRLA KLTEE+ GQV++M S GMKPK VT+AMKALHEDSD+DINKRAVQNAAA+VHGAEKP DAADAYEEVM  TADGGVCEIKMDDSG LTHIWWQ+REQV  W R+G
Sbjct:   68 KTKLEAVPTEGKTPEDVVEEVVRTCTGEGAILSTAKSTRCRDGATDRVDIKKLICTRGGGCRQLEYEARLDTRL------------------VSIRHARTHQWPKISNMKLEHNHVVNREAIDVKLRLAGKLTEERRGQVEKMISKGMKPKAVTEAMKALHEDSDVDINKRAVQNAAASVHGAEKPGDAADAYEEVMVVTADGGVCEIKMDDSGCLTHIWWQSREQVALWNRYG 283
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BLAST of mRNA_Ecto-sp13_S_contig7976.19276.1 vs. uniprot
Match: A0A6H5KUA5_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUA5_9PHAE)

HSP 1 Score: 305 bits (782), Expect = 5.670e-98
Identity = 158/206 (76.70%), Postives = 166/206 (80.58%), Query Frame = 1 
Query:   85 GAILSTAKSTRCRDGATDRVDMKKLICTRGGKSRQLEYEASLDTAPGVQRRNVKGSARTGCPFEVSVRHAKSHRWPRISNMKLTHNHSVDRKAIDVKLRLASKLTEEQLGQVKQMTSHGMKPKEVTKAMKALHEDSDIDINKRAVQNAAATVHGAEKPRDAADAYEEVMAATADGGVCEIKMDDSGRLTHIWWQTREQVGRWWRFG 702
            G I   A    C  G        +   T  G   Q     + +TAPGV RRNVKGSARTGCPFEVSVRHAK+HRWP+ISNMKL HNHSVDR AIDV+LRLASKLTEEQLGQV QMTSHGMKPKEVTKAMKALHED DIDINKRAVQNAAATVHGAEKPRDAADAYEEV+AATADGGVCEIKMDDSGRLTHIWWQTREQV  W R+G
Sbjct:   42 GVIARNASIQCCSAGLLPCTSPPRTATTAAGIDHQPSAGNAGETAPGVLRRNVKGSARTGCPFEVSVRHAKTHRWPKISNMKLKHNHSVDRNAIDVQLRLASKLTEEQLGQVNQMTSHGMKPKEVTKAMKALHEDGDIDINKRAVQNAAATVHGAEKPRDAADAYEEVLAATADGGVCEIKMDDSGRLTHIWWQTREQVALWNRYG 247
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BLAST of mRNA_Ecto-sp13_S_contig7976.19276.1 vs. uniprot
Match: A0A6H5JDU5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDU5_9PHAE)

HSP 1 Score: 254 bits (650), Expect = 4.320e-82
Identity = 142/188 (75.53%), Postives = 148/188 (78.72%), Query Frame = 1 
Query:    1 KAKLEAVQTEGKTLEDVEEEVVRLCAGEGAILSTAKSTRCRDGATDRVDMKKLICTRGGKSRQLEYEASLDTAPGVQRRNVKGSARTGCPFEVSVRHAKSHRWPRISNMKLTHNHSVDRKAIDVKLRLASKLTEEQLGQVKQMTSHGMKPKEVTKAMKALHEDSDIDINKRAVQNAAATVHGAEKPRD 564
            KA LEAVQTEGKTLEDVEEEVVRLCAGEGAILSTAKST                              SLDTAPGV RRNVKGSARTGCPFEVSVRHAK+HRWP+ISNMKL HNHSVDR AIDV++RLASKLTEEQLGQVKQMTSHGMKPKEVTKAMKALHED DIDINKRAVQNAAATV    + R+
Sbjct:   58 KANLEAVQTEGKTLEDVEEEVVRLCAGEGAILSTAKST------------------------------SLDTAPGVLRRNVKGSARTGCPFEVSVRHAKTHRWPKISNMKLKHNHSVDRNAIDVQVRLASKLTEEQLGQVKQMTSHGMKPKEVTKAMKALHEDGDIDINKRAVQNAAATVRTGRRSRE 215
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BLAST of mRNA_Ecto-sp13_S_contig7976.19276.1 vs. uniprot
Match: A0A6H5KWS5_9PHAE (FAR1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWS5_9PHAE)

HSP 1 Score: 238 bits (608), Expect = 1.580e-76
Identity = 119/124 (95.97%), Postives = 121/124 (97.58%), Query Frame = 1 
Query:    1 KAKLEAVQTEGKTLEDVEEEVVRLCAGEGAILSTAKSTRCRDGATDRVDMKKLICTRGGKSRQLEYEASLDTAPGVQRRNVKGSARTGCPFEVSVRHAKSHRWPRISNMKLTHNHSVDRKAIDV 372
            KAKLEAVQTEG+TLEDVEEEVV LCAGEGAILSTAKSTRCRDGATDRVDMKKLICTRGGKSRQ EYE SLDTAPGVQRRNVKGSARTGCPFEV+VRHAKSHRWPRISNMKLTHNHSVDRKAIDV
Sbjct:   54 KAKLEAVQTEGRTLEDVEEEVVSLCAGEGAILSTAKSTRCRDGATDRVDMKKLICTRGGKSRQAEYETSLDTAPGVQRRNVKGSARTGCPFEVNVRHAKSHRWPRISNMKLTHNHSVDRKAIDV 177
[Close]
BLAST of mRNA_Ecto-sp13_S_contig7976.19276.1 vs. uniprot
Match: A0A6H5JGR0_9PHAE (FAR1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGR0_9PHAE)

HSP 1 Score: 243 bits (620), Expect = 4.790e-75
Identity = 122/127 (96.06%), Postives = 125/127 (98.43%), Query Frame = 1 
Query:    1 KAKLEAVQTEGKTLEDVEEEVVRLCAGEGAILSTAKSTRCRDGATDRVDMKKLICTRGGKSRQLEYEASLDTAPGVQRRNVKGSARTGCPFEVSVRHAKSHRWPRISNMKLTHNHSVDRKAIDVKLR 381
            KAKLEAVQTEG+TL+DVEEEVV LCAGEGAILSTAKSTRCRDGATDRVDMKKLICTRGGKSR LEYEASLDTAPGVQRRNVKGSARTGCPFEVSVRHAKSHRWPRISNMKLTHNHSVDR+AIDVKLR
Sbjct:  286 KAKLEAVQTEGRTLKDVEEEVVSLCAGEGAILSTAKSTRCRDGATDRVDMKKLICTRGGKSRHLEYEASLDTAPGVQRRNVKGSARTGCPFEVSVRHAKSHRWPRISNMKLTHNHSVDREAIDVKLR 412
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7976.19276.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JUZ2_9PHAE1.740e-13593.78SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5L586_9PHAE6.980e-12898.46FAR1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JK57_9PHAE3.310e-12481.55MULE domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JAS6_9PHAE3.140e-11980.43MULE domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JNB0_9PHAE8.500e-11880.17SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KZF1_9PHAE2.970e-10774.79MULE domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KUA5_9PHAE5.670e-9876.70MULE domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JDU5_9PHAE4.320e-8275.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KWS5_9PHAE1.580e-7695.97FAR1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JGR0_9PHAE4.790e-7596.06FAR1 domain-containing protein n=1 Tax=Ectocarpus ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7976contigEcto-sp13_S_contig7976:1..1849 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score115.9
Seed ortholog evalue2.7e-23
Seed eggNOG ortholog2880.D8LU83
Preferred nameFHY3
Model size768
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003700,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006355,GO:0007154,GO:0007165,GO:0007602,GO:0007623,GO:0008150,GO:0009314,GO:0009416,GO:0009581,GO:0009582,GO:0009583,GO:0009585,GO:0009605,GO:0009628,GO:0009639,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010017,GO:0010018,GO:0010218,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0023052,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0042752,GO:0042753,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0045893,GO:0045935,GO:0048511,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051606,GO:0051716,GO:0060255,GO:0065007,GO:0071214,GO:0071478,GO:0071482,GO:0071489,GO:0071490,GO:0080090,GO:0104004,GO:0140110,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141
Exons6
EggNOG free text desc.MULE transposase domain
EggNOG OGs2CMBY@1,2QPXR@2759
Cds size768
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7976.19276.1prot_Ecto-sp13_S_contig7976.19276.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7976 1..1849 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464069.2193825-CDS-Ecto-sp13_S_contig7976:0..2171681464069.2193825-CDS-Ecto-sp13_S_contig7976:0..217Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7976 1..217 +
1681464069.2323925-CDS-Ecto-sp13_S_contig7976:394..4531681464069.2323925-CDS-Ecto-sp13_S_contig7976:394..453Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7976 395..453 +
1681464069.2427707-CDS-Ecto-sp13_S_contig7976:709..8661681464069.2427707-CDS-Ecto-sp13_S_contig7976:709..866Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7976 710..866 +
1681464069.2540607-CDS-Ecto-sp13_S_contig7976:1062..12141681464069.2540607-CDS-Ecto-sp13_S_contig7976:1062..1214Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7976 1063..1214 +
1681464069.2681556-CDS-Ecto-sp13_S_contig7976:1454..15581681464069.2681556-CDS-Ecto-sp13_S_contig7976:1454..1558Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7976 1455..1558 +
1681464069.2767584-CDS-Ecto-sp13_S_contig7976:1770..18491681464069.2767584-CDS-Ecto-sp13_S_contig7976:1770..1849Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7976 1771..1849 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7976.19276.1

>prot_Ecto-sp13_S_contig7976.19276.1 ID=prot_Ecto-sp13_S_contig7976.19276.1|Name=mRNA_Ecto-sp13_S_contig7976.19276.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=256bp
KAKLEAVQTEGKTLEDVEEEVVRLCAGEGAILSTAKSTRCRDGATDRVDM
KKLICTRGGKSRQLEYEASLDTAPGVQRRNVKGSARTGCPFEVSVRHAKS
HRWPRISNMKLTHNHSVDRKAIDVKLRLASKLTEEQLGQVKQMTSHGMKP
KEVTKAMKALHEDSDIDINKRAVQNAAATVHGAEKPRDAADAYEEVMAAT
ADGGVCEIKMDDSGRLTHIWWQTREQVGRWWRFGIGTVTLRSTTTPPSRT
DTGCPS
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mRNA from alignment at Ecto-sp13_S_contig7976:1..1849+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7976.19276.1 ID=mRNA_Ecto-sp13_S_contig7976.19276.1|Name=mRNA_Ecto-sp13_S_contig7976.19276.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1849bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7976:1..1849+ (Ectocarpus species13 EcNAP12_S_4_19m)
AAGGCGAAGCTGGAGGCAGTGCAGACGGAGGGAAAGACGCTTGAAGACGT
GGAGGAGGAGGTGGTGAGGTTGTGCGCCGGTGAAGGGGCGATCCTTTCTA
CCGCGAAGTCGACGAGGTGTCGCGACGGCGCAACGGATCGTGTGGACATG
AAGAAGCTGATTTGTACCCGAGGCGGGAAGAGCCGTCAACTGGAGTACGA
AGCCAGTCTAGACACCGGTAAGCGTTCCATCCGTGGCACTTGGGGATACT
AGGAGAATGGTTGAGGCGACGAATACGGGGCGAGTCGCGGGCAAGCCTGT
TGTTAGCATGCATGCTTCGGTGCAGGTGAATGCATGACACACCGCCGATG
ACACACCGCCTATACTCCGTCTCCCATGTCGTTGCGTGTTGCAGCACCTG
GGGTACAACGGCGGAACGTAAAGGGAAGCGCGAGGACTGGTTGTCCGTTT
GAGGTACGTAGCTGGTCTCCCGCGGAACATGTCTTGGTGCAGTGGACGGA
GAAAGGGTCCAACAGGTGTCTGAGGTCTTTGAGCGTGAGATTGAAAAAGA
TGTCCGAACTGCGTTTTTAAAATTGGGGAGGGGTCGGTCGGGTGTCTTGT
GATGCATGATCCATGTTGTGATCCATTACACACACACATATCCCACGTAT
CCATCGTTTACTTATTCCTCTTCTATCCTTGTTGTGGACCCACCGTTCCG
TTATTTCAGGTTAGCGTCCGGCACGCGAAGTCCCACAGGTGGCCCAGGAT
TAGCAACATGAAGCTCACGCACAACCACAGCGTCGACCGCAAGGCCATCG
ACGTCAAGCTTCGCCTCGCATCAAAACTAACGGAGGAGCAGCTGGGACAA
GTGAAGCAGATGACAAGTGAGAAGATTGAACTCGTTGGAGTAGGTCTACA
GTGGCTCCCGTCGTGTCCCACGGTTTGTCATGGTTGGTAGTCATGATGCC
GCATGACGAACGGCCCTTGAAGCGTGGTACTGCTGTCGCCTCCACATTGT
TACCCTGTTTGTCTGTGACACGCCACTTATTTTTGTGCTCCCGGCTCTCC
CATACGGCGCAGGTCATGGGATGAAGCCAAAAGAGGTGACAAAAGCAATG
AAGGCGTTGCACGAGGACAGCGACATCGACATCAACAAGCGCGCGGTGCA
GAACGCGGCTGCCACTGTGCACGGGGCGGAGAAGCCGAGAGATGCCGCCG
ATGCGTACGAAGAGGTGTGTCCATGTGTCCGTTGAGACTGTTGCCTCTCT
TGTTTGTGTGTGGGATGTTGGGTTTGCTCAAGGCGGTAACCGGGCGACAA
GACACATACGATCGCAGGTGACAACCGGGAGAATATATGCCCCATGACAC
CAAACCAAGAAATGTTGGAGGTAAAAAATGTGTGCCGTGCCGTCGTCGTG
GTTTTGCGCTGATGCCCTCGATGTTTCCGGGCGCTTAACATGTTGCAATT
TCAGGTCATGGCCGCGACGGCCGACGGCGGAGTGTGCGAGATCAAGATGG
ATGACAGCGGCCGCCTGACGCACATCTGGTGGCAAACGAGAGAGCAGGTA
GGTCGCTGGTCGTTGTGCCCCATTCGAATATTCCCCAGCCGGAAGGTTTG
CTTTCATTTTCGCATCTCGCACGTATCGCTTGGCCGTCCGCAAATGTAGG
ACGTCTGACCGAAAGCAGGCCGTAGGCAAGGGTGGGGGTGCGTTGTGACG
CGTCCAACACACGTCACACCCACAATGAAGTGCTCTCGATCCCCTTCGAC
GTCATGCTCCGAATACGCAGGTGGCGCTTTGGAATCGGTACGGTCACGTT
GCGCTCTACGACGACACCGCCGTCAAGAACAGATACCGGATGCCCCTCG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7976:1..1849+

>mRNA_Ecto-sp13_S_contig7976.19276.1 ID=mRNA_Ecto-sp13_S_contig7976.19276.1|Name=mRNA_Ecto-sp13_S_contig7976.19276.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=768bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7976:1..1849+ (Ectocarpus species13 EcNAP12_S_4_19m)
AAGGCGAAGCTGGAGGCAGTGCAGACGGAGGGAAAGACGCTTGAAGACGT
GGAGGAGGAGGTGGTGAGGTTGTGCGCCGGTGAAGGGGCGATCCTTTCTA
CCGCGAAGTCGACGAGGTGTCGCGACGGCGCAACGGATCGTGTGGACATG
AAGAAGCTGATTTGTACCCGAGGCGGGAAGAGCCGTCAACTGGAGTACGA
AGCCAGTCTAGACACCGCACCTGGGGTACAACGGCGGAACGTAAAGGGAA
GCGCGAGGACTGGTTGTCCGTTTGAGGTTAGCGTCCGGCACGCGAAGTCC
CACAGGTGGCCCAGGATTAGCAACATGAAGCTCACGCACAACCACAGCGT
CGACCGCAAGGCCATCGACGTCAAGCTTCGCCTCGCATCAAAACTAACGG
AGGAGCAGCTGGGACAAGTGAAGCAGATGACAAGTCATGGGATGAAGCCA
AAAGAGGTGACAAAAGCAATGAAGGCGTTGCACGAGGACAGCGACATCGA
CATCAACAAGCGCGCGGTGCAGAACGCGGCTGCCACTGTGCACGGGGCGG
AGAAGCCGAGAGATGCCGCCGATGCGTACGAAGAGGTCATGGCCGCGACG
GCCGACGGCGGAGTGTGCGAGATCAAGATGGATGACAGCGGCCGCCTGAC
GCACATCTGGTGGCAAACGAGAGAGCAGGTAGGTCGCTGGTGGCGCTTTG
GAATCGGTACGGTCACGTTGCGCTCTACGACGACACCGCCGTCAAGAACA
GATACCGGATGCCCCTCG
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