prot_Ecto-sp13_S_contig7968.19267.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7968.19267.1
Unique Nameprot_Ecto-sp13_S_contig7968.19267.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length470
Homology
BLAST of mRNA_Ecto-sp13_S_contig7968.19267.1 vs. uniprot
Match: A0A6H5JYM5_9PHAE (MEP15 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYM5_9PHAE)

HSP 1 Score: 696 bits (1795), Expect = 9.710e-249
Identity = 371/467 (79.44%), Postives = 385/467 (82.44%), Query Frame = 0
Query:    1 RTSPTISYNDGALHVQGGCATIRDLIEYRTNDGKQIGPIFHFDE-----------------------------DKKWYTDTYTGTYYLESDVFITNGATLSIDGSESEENECETLLLASNSSTFNRITAHGGNLDIRYTKIFSWDLKNEDYDMDPSDGRSYLSAVTEKITGRTKDTCPDDSSSSNGQAKKDMGNANMDIHRSEIGYLGYDGSEAYGISYKARGLCKDHSNLDIFDDDNGLNVGVTGDIYGSDLHHNWFGHYSWGHDGGKWQYNTVHDNHGYGFDPHDDSDKLKIIGNEVYNNGWHGIIASKRCTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETSDSKVYKNTLENNKFGVRWSNGANDNRVWRNDIVVEANQ---FAFYI----------FKGTDPQEAEGNEDGRIRDNSVYKNEIWSDQDLVWKATEAEDNVFWRNVF 425
            +TSPTISY+DGALHVQGGCATIRDLIEYRTNDGKQIGPIFHFDE                             DKKWYTDTYTGTYYLESDVFITNGATLSIDGSESEENECETLLLASNSSTFNRITAHGGNLDIRYTKIFSWDLKNEDYD DPSDGRSYLSAVTEKITGRTKDTCPDDSSSSNGQAK+DMGNANMDIHRSEIGYLGYDGSEAYGISYKARGLCKD+SNLDIFDDDNGLNVGVTGDIY SDLHHNWFGHYSWGHDGGKWQYNTVHDN+GYGFDPHDDSDKLKI+GNEVYNNGWHGII +             XXXXXXXX                XXXXXXXX   ETSDSKVYKNTLENNK+GVRWSNGAN+NRVW+NDIVVEA+Q   FAFY+           KGTDPQEAEGNEDGRIRDNSVY+N IWSDQD+VWKATEAEDNVFW   F
Sbjct:   17 KTSPTISYDDGALHVQGGCATIRDLIEYRTNDGKQIGPIFHFDEVWKGTSVTLGVAFPKGELLIMFFLTTNLQDKKWYTDTYTGTYYLESDVFITNGATLSIDGSESEENECETLLLASNSSTFNRITAHGGNLDIRYTKIFSWDLKNEDYDTDPSDGRSYLSAVTEKITGRTKDTCPDDSSSSNGQAKEDMGNANMDIHRSEIGYLGYDGSEAYGISYKARGLCKDNSNLDIFDDDNGLNVGVTGDIYDSDLHHNWFGHYSWGHDGGKWQYNTVHDNYGYGFDPHDDSDKLKIVGNEVYNNGWHGIIYT------YGLLRMVXXXXXXXXMLHRSCDRANVRENYAXXXXXXXXALFETSDSKVYKNTLENNKYGVRWSNGANNNRVWKNDIVVEADQGGDFAFYMCEFAQTDGETVKGTDPQEAEGNEDGRIRDNSVYRNNIWSDQDMVWKATEAEDNVFWVRSF 477          
BLAST of mRNA_Ecto-sp13_S_contig7968.19267.1 vs. uniprot
Match: D7FWK3_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWK3_ECTSI)

HSP 1 Score: 670 bits (1729), Expect = 2.650e-239
Identity = 336/428 (78.50%), Postives = 347/428 (81.07%), Query Frame = 0
Query:    1 RTSPTISYNDGALHVQGGCATIRDLIEYRTNDGKQIGPIFHFDEDKKWYTDTYTGTYYLESDVFITNGATLSIDGSESEENECETLLLASNSSTFNRITAHGGNLDIRYTKIFSWDLKNEDYDMDPSDGRSYLSAVTEKITGRTKDTCPDDSSSSNGQAKKDMGNANMDIHRSEIGYLGYDGSEAYGISYKARGLCKDHSNLDIFDDDNGLNVGVTGDIYGSDLHHNWFGHYSWGHDGGKWQYNTVHDNHGYGFDPHDDSDKLKIIGNEVYNNGWHGIIASKRCTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETSDSKVYKNTLENNKFGVRWSNGANDNRVWRNDIVVEANQ---FAFYIFKGTDPQEAEGNEDGRIRDNSVYKNEIWSDQDLVWKATEAEDNVFWRNVF 425
            +TSP ISY+DGALHVQGGCATI DLIEYRTNDGKQIGPIFHFDE+KKWYTDTYTGTYYLESDVFITNGATLSIDGSESE+NECE+LLLASNSSTFNRITAHGGNLDIRYTKIFSWDL+NEDYD +PSDGRSYLSAVTEKITGRTKDTCPDDSSSSNGQAKKDMGNANMDIHRSEIGYLGYDGSEAYGISYKARGLCKDHSNLDIFDDDNGLNVGVTGDIY SDLHHNWFGHYSWGHDGGKWQYNTVHDN+GYGFDPHDDSDKL+IIGNEVYNNGWHGI                                                                    GVRWSNGAN NRVW NDIVVEA+Q   FA Y+FKGTDPQEAEGNEDGRIRDNSVYKNEIWSDQDLVWKATEAEDNVFW   F
Sbjct:   79 QTSPKISYDDGALHVQGGCATIHDLIEYRTNDGKQIGPIFHFDEEKKWYTDTYTGTYYLESDVFITNGATLSIDGSESEKNECESLLLASNSSTFNRITAHGGNLDIRYTKIFSWDLENEDYDTEPSDGRSYLSAVTEKITGRTKDTCPDDSSSSNGQAKKDMGNANMDIHRSEIGYLGYDGSEAYGISYKARGLCKDHSNLDIFDDDNGLNVGVTGDIYRSDLHHNWFGHYSWGHDGGKWQYNTVHDNYGYGFDPHDDSDKLRIIGNEVYNNGWHGI-------------------------------------------------------------------NGVRWSNGANGNRVWMNDIVVEADQGADFALYMFKGTDPQEAEGNEDGRIRDNSVYKNEIWSDQDLVWKATEAEDNVFWVRSF 439          
BLAST of mRNA_Ecto-sp13_S_contig7968.19267.1 vs. uniprot
Match: A0A6H5JUS5_9PHAE (MEP12 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUS5_9PHAE)

HSP 1 Score: 395 bits (1016), Expect = 1.590e-127
Identity = 267/485 (55.05%), Postives = 333/485 (68.66%), Query Frame = 0
Query:    2 TSPTISYNDGA--LHVQGGCATIRDLIEYRTNDGKQIGPIFHFDEDKKWYTDTYTGTYYLESDVFITNGATLSIDGSESEENECETLLLASN-----SSTFNRITAHGGNLDIRYTKIFSWDLKNEDYDMDPSDGRSYLSAVTEKITGRTKDTCPDDSSS-----SNGQAKKDMGNANMDIHRSEIGYLGYDGSEAYGISYKARGLCKDHSNLDIFDDDNGLNV----GVTGDIYGSDLHHNWFGHYSWGHDGGKWQYNTVHDNHGYGFDPHDDSDKLKIIGNEVYNNGWHGIIASKRCTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETSDSKVYKNTLENNKFGVRWSNGANDNRVWRNDIVV---EANQFAFYIFKGTDPQEAEGNEDGRIRDNSVYKNEIWSDQDLVWKATEAEDNVFWRNVFHGGESAYFGGESKNNKVNNNMFPDG-WEFETDGESCFREGTD 466
            ++P IS+ + +  L++ GGCAT+ D+ E R+++    GP+++FD++    ++TYTG YYL+S++ I NGATL IDG+ +    CETLL+A N     S + N I AHGGNL +R TKIFSWD+    YD +  +GR YLSA+TE ITGR +D CP D+ +     S GQAK+ MG A MDI+ SE+ YLGY  SE+YGISYKARGLCK   N+DIFDDD    V     V GDIY S +H+NWFGHYS+GH GGKW  N V+DN GYGFDPHDDSD L+I GN+V+ NG+HGIIASKRCTD  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  SD  VY N  ENN  GVRWSNGAN N V+ N + V   + + +A Y+++G D  EA+GN DG  RDN +Y N I+S +++ W  T+A+D             A F  +S NN V +N F D  +EF     SCF  GTD
Sbjct:   35 SAPDISWAESSNRLYIDGGCATMADIYEDRSDNLGAKGPLYYFDQENNVISETYTGVYYLDSNIHIRNGATLEIDGTGALA--CETLLMAGNDDITGSDSLN-IRAHGGNLVVRDTKIFSWDITTGTYDTNTGNGRPYLSAITEFITGRDEDLCPSDTQAGEDGYSTGQAKEQMGVARMDIYDSELAYLGYSESESYGISYKARGLCKTLENVDIFDDDQDFPVYGAYAVYGDIYRSKIHNNWFGHYSYGHQGGKWIDNDVYDNVGYGFDPHDDSDHLEIRGNKVWGNGYHGIIASKRCTDITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDCDVYDNVFENNPRGVRWSNGANRNNVYSNTMTVGSGDDDDYAIYLYRGNDEPEADGNPDGHPRDNKIYDNNIYSGKEVAWLTTDADDXXXXXXXXXXXSKAIFE-DSTNNLVRDNTFTDSSFEFSVTN-SCFSTGTD 514          
BLAST of mRNA_Ecto-sp13_S_contig7968.19267.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI)

HSP 1 Score: 272 bits (696), Expect = 2.340e-82
Identity = 179/466 (38.41%), Postives = 249/466 (53.43%), Query Frame = 0
Query:   15 VQGGCATIRDLIEYRTNDGKQIGPIFHFDEDKKWYTDTYTGTYYLESDVFITNGATLSIDGSESEENECETLLLASNSSTFNRITAHGGNLDIRYTKIFSWDLKNEDYDMDPSDGRSYLSAVTEKITGRTKDTCPDDSSSSNGQAKKDMGNANMDIHRSEIGYLGYDGSEAYGISYKARGLCKDHSNLDIFDDDNGLNVGVTGDIYGSDLHHNWFGHYSWGHDGGKWQYNTVHDNHGYGFDPHDDSDKLKIIGNEVYNNGWHGIIASKRCT--DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETSDSKVYKNTLENNKFGVRWSNGANDNRVWRNDIVVEANQFAFYIFKGTDPQEAEGNEDGRIRDNSVYKNEIWSDQDLVWKATEAEDNVFWRNVFHGGES----AYFGGESKNNKVNNNMFPDG-WEFETDGESCFR----EGTDPEC 469
             +GGC T+  + E R   GK  GP++  D D    + + TGT+ L  ++++ +G TL + GSE+  +  E  LL++N  TF  + AHGG+LD   TK+FSWD      D D +DGRSY+SA++E IT   + TC        G AK  MG A MDI  SEIGYLGY  SE+YG+++K RG C+D SN ++FDD     V V G++Y SD+HH  FG Y++GH  G W+ N +HDN GYGFDPHDDSD L I  NEVYNNG+HGIIASKRC                                               E+ ++ V +NT ENNK+GVR+S G  DN V+ N+ +    ++  Y + GTD  +   +  GR + N+V+    +S  +   K  EA+   F  NVF  G++      F   ++N    N    DG +E + D ++CF      G +P C
Sbjct:   65 TRGGCVTLGQIWESRA--GK--GPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTN-ETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDE-TCE-------GNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDD-----VNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADN-VFSNNTISNNAEYNAYSYLGTDEPDVVSS--GRSQ-NNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACFDGEADSGYEPVC 508          
BLAST of mRNA_Ecto-sp13_S_contig7968.19267.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI)

HSP 1 Score: 267 bits (683), Expect = 2.200e-80
Identity = 177/466 (37.98%), Postives = 248/466 (53.22%), Query Frame = 0
Query:   15 VQGGCATIRDLIEYRTNDGKQIGPIFHFDEDKKWYTDTYTGTYYLESDVFITNGATLSIDGSESEENECETLLLASNSSTFNRITAHGGNLDIRYTKIFSWDLKNEDYDMDPSDGRSYLSAVTEKITGRTKDTCPDDSSSSNGQAKKDMGNANMDIHRSEIGYLGYDGSEAYGISYKARGLCKDHSNLDIFDDDNGLNVGVTGDIYGSDLHHNWFGHYSWGHDGGKWQYNTVHDNHGYGFDPHDDSDKLKIIGNEVYNNGWHGIIASKRCT--DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETSDSKVYKNTLENNKFGVRWSNGANDNRVWRNDIVVEANQFAFYIFKGTDPQEAEGNEDGRIRDNSVYKNEIWSDQDLVWKATEAEDNVFWRNVFHGGES---AYFGGESKNNKVNNNMFPDGWEFE--TDGESCFR----EGTDPEC 469
             +GGCAT+  + E R   GK   P++  D D    ++T TGT+ L  ++++ +G TL + G++ E  + + L L S S T+  + AHGG+LD   TK+FSWD      D D +DGRSY+SAV+E +T   + TC        G AK  MG A MDI  SEIGYLG+  SE+YG+++K RG CKD SN +IFDD     V V G++Y SD+HH  FG Y++GH  G W+ N +HDN GYGFDPHDDSD L I  NEVYNNG+HGIIASKRC                                               E+ ++ V +NT ENNK+GVR S G  DN V+  +I+   +++  Y + G+D  +   +  GR + N+V+    +S  +   K  EA+   F  NVF  G++        ++ N+ +  N   D  +FE     +SCF      G +P C
Sbjct:   69 TRGGCATLGQIWESRA--GK--APLYAVDPDSGDVSETETGTWLLTEELYVEDGITLKVYGTD-EGGDADELRLLSTSETYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDE-TCE-------GNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDD-----VNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADN-VFSENIISNNSKYNAYTYLGSDEPDVVSS--GRSQ-NNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNTGLDEGDFELKVTNDSCFDGESDSGYEPVC 512          
BLAST of mRNA_Ecto-sp13_S_contig7968.19267.1 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE)

HSP 1 Score: 265 bits (677), Expect = 1.210e-79
Identity = 178/426 (41.78%), Postives = 247/426 (57.98%), Query Frame = 0
Query:   15 VQGGCATIRDLIEYRTNDGKQIGPIFHFDEDKKWYTDTYTGTYYLESDVFITNGATLSIDGSESEENECETLLLASNSSTFNRITAHGGNLDIRYTKIFSWDLKNEDYDMDPSDGRSYLSAVTEKITGRTKDTCPDDSSSSNGQAKKDMGNANMDIHRSEIGYLGYDGSEAYGISYKARGLCKDHSNLDIFDDDNGLNVGVTGDIYGSDLHHNWFGHYSWGHDGGKWQYNTVHDNHGYGFDPHDDSDKLKIIGNEVYNNGWHGIIASKRCT--DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETSDSKVYKNTLENNKFGVRWSNGANDNRVWRNDIVVEANQFAFYIFKGTDPQEAEGNEDGRIRDNSVYKNEIWSDQDLVWKATEAEDNVFWRNVFHGGESAYFGGESK 438
             +GGC T+  + E++  +     P++  D      +D+ TGT+ L  ++F+ +G TL + G+ S   + + L L S S TF  + AHGG+LD   TK+F+WD      D D  DGRSY+SAV+E IT        DDS + NG+AK +MG A MDI  SE+GYLGY GSE+YG+++K RG C D SN D+F+D     V V G+IY SD+HHN FG Y++GH  G W+ N +HDN GYGFDPHDDSD L I  NEVY+NG+HGIIASKRC                        XXXXXXXXXXXXXXXX       E+ ++ V  N  ENNK+G+R+S G+  N V+ N+++  + +++ Y + G+D  +    + GR +DN   +N I    + + K  +A+   F  N F    +  F    K
Sbjct:   62 TRGGCVTLEQIWEHQRGEA----PLYAVDSKSGDISDSATGTWLLTEELFVEDGITLKVHGT-SAGGDADELRLLSTSDTFINLRAHGGSLDFLSTKVFAWDTSINGPDRDEEDGRSYVSAVSEVIT--------DDSQTCNGRAKNNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHDLFED-----VNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYDNGYHGIIASKRCNGVSIQGNEVYGGATSSAGIFLHRXXXXXXXXXXXXXXXXDAGLAMMESFNADVSDNIFENNKYGIRFSVGSGRN-VFFNNVISGSTRYSTYSYLGSDAPDVV--DSGRSQDNVFQENNIIGGVESI-KLLDADGTQFIDNTFEDATTIRFNDAKK 465          
BLAST of mRNA_Ecto-sp13_S_contig7968.19267.1 vs. uniprot
Match: D8LD45_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD45_ECTSI)

HSP 1 Score: 265 bits (677), Expect = 1.280e-78
Identity = 169/464 (36.42%), Postives = 237/464 (51.08%), Query Frame = 0
Query:   11 GALHVQGGCATIRDLIEYR---TNDGKQIGPIFHFDEDKKWYTDTYTGTYYLESDVFITNGATLSIDGSESEENECETLLLAS------NSSTFNRITAHGGNLDIRYTKIFSWDLKNEDYDMDPSDGRSYLSAVTEKITGRTKDTCPDDSSSSNGQAKKDMGNANMDIHRSEIGYLGYDGSEAYGISYKARGLCKDHSNLDIFDDDNGLNVGVTGDIYGSDLHHNWFGHYSWGHDGGKWQYNTVHDNHGYGFDPHDDSDKLKIIGNEVYNNGWHGIIASKRCTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--ETSDSKVYKNTLENNKFGVRWSNGANDNRVWRNDIVVEANQFAFYIFKGTDPQEAEGNEDGRIRDNSVYKNEIWSDQDLVWKATEAEDNVFWRNVFHGGESAYFGGESKNNKVNNNMFPDGWEFETDGESCFRE 463
            G    +GGC T+  + E R   T  G +  P++  D     Y+D  TGT+ LE D+++ +G TL + G+ S     E  L ++       + T+  + AHGG+LD  +TK+F WD  N  YDMD +DGRSY+SAV+E +   T+ TC        G AK  MG A MDI  SE+GY+G+  SE+YG+++K RG CKD SN ++FD      V V G+IY S+LHH  F  Y++GH  G W+ NTVH N GYG+DPHDDSD L I  N VY+N WHGIIASKRC +                                             E+S++++  N  E NK+G+R S G  DN V  N+ +   +Q+A Y ++G+DP E +    GR +DN    N +      + K  E++      NVF+      F   ++N    N    D  E E    +CF E
Sbjct:  137 GVEGERGGCVTVEQIWEARGGGTTTGAKA-PLYAVDPVSGEYSDVITGTWLLEEDLYVEDGITLKVWGNGSGGYADELRLKSTPPTEDGGNGTYINLRAHGGSLDFEHTKVFGWDTTNNSYDMDETDGRSYISAVSEIVLDPTQ-TCE-------GNAKNTMGEARMDIVNSEMGYMGFHDSESYGLTWKVRGFCKDKSNPEVFDQ-----VNVYGNIYDSELHHMNFAVYTYGHQQGDWRRNTVHSNSGYGYDPHDDSDFLTIHDNVVYDNNWHGIIASKRCNNVSIQGNIVYGGNDTSAGIFLHRSSDYAVVKDNHCYGNGDAGMAMLESSNAEISGNIFEGNKYGIRMSVGCRDNFV-SNNTMTNTSQYAIYTYQGSDPAEVQPT--GRSQDNIFDSNTVVGGPQAI-KLKESDGTRITNNVFYEPGLVEFSNTTENVVTGNVGLEDATEVELVEPACFAE 582          
BLAST of mRNA_Ecto-sp13_S_contig7968.19267.1 vs. uniprot
Match: D7FZF9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZF9_ECTSI)

HSP 1 Score: 260 bits (664), Expect = 3.920e-77
Identity = 192/463 (41.47%), Postives = 256/463 (55.29%), Query Frame = 0
Query:   17 GGCATIRDLIEYR--TNDGKQIGPIFHFDEDKKWYTDTYTGTYYLESDVFITNGATLSIDGSESEENECETLLLASNSSTFNRITAHGGNLDIRYTKIFSWDLKNEDYDMDPSDGRSYLSAVTEKITGRTKDTCPDDSSSSNGQAKKDMGNANMDIHRSEIGYLGYDGSEAYGISYKARGLCKDHSNLDIFDDDNGLNVGVTGDIYGSDLHHNWFGHYSWGHDGGKWQYNTVHDNHGYGFDPHDDSDKLKIIGNEVYNNGWHGIIASKRCTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------ETSDSKVYKNTLENNKFGVRWSNGANDNRVWRNDIVV--EANQFAFYIFKGTDPQEAEGNEDGRIRDNSVYKNEIWSDQDLVWKATEAEDNVFWRNVFHGGESAYFGGESKNNKVNNNMFPDGWEFETDGESCFREGTD 466
            G CAT+ D+ E R  T  G+  GP++ FDE     T+  TG++YL S +++T GA L + G  S+  +C+ LLLAS++  F  + A+GG + +  T + SWDL     D +  DGRSYLSA++E I     +          G A  DMG A MDI  SEI +LG+  SE+YGI+YK RG C D SN ++F+      VGVTGDI GS +HH +FGHYS+GH GG W YNTVHDN GYGFDPHDDSD + I  N                  XXXXXXXXXXX                 XXXXXXXXXX              E+S+ ++ +N L  NK G+R S G+ +N  + N IV+  E  ++A Y+++G D    EG+ DGR R+N V+ N + SD  +V  A  A+DN+   N   G ES +   +S N     N  PD  EF+ +  SCF   +D
Sbjct:   69 GACATMTDIYESRIDTYTGENKGPVYPFDETTGGITNNVTGSWYLGSSLYVTEGARLVVQGL-SKGGDCDHLLLASSAEKFINVRAYGGEIMLDGTHVESWDLLEGTVDENYDDGRSYLSAISEVIINPAMEC--------EGMATNDMGEARMDIIDSEINHLGHYESESYGIAYKVRGFCNDLSNPELFE-----TVGVTGDILGSHIHHLYFGHYSYGHQGGNWSYNTVHDNVGYGFDPHDDSDYVTISNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHVTDAGKITGNGIMLHXXXXXXXXXXNVVENNMDSGVAVYESSNCEISQNNLSRNKNGIRMSMGSANNLAFENHIVINGEDERYAIYLYRGNDTPAVEGS-DGRPRNNRVFDNSLMSDNAVVM-ARNADDNIIEGNTIFGRESRFV--DSFNTLWYGNSVPDVHEFKLEDGSCFDPESD 513          
BLAST of mRNA_Ecto-sp13_S_contig7968.19267.1 vs. uniprot
Match: D7FZF8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZF8_ECTSI)

HSP 1 Score: 259 bits (661), Expect = 1.290e-76
Identity = 202/464 (43.53%), Postives = 272/464 (58.62%), Query Frame = 0
Query:   17 GGCATIRDLIEYRTNDGKQIGPIFHFDEDKKWYTDTYTGTYYLESDVFITNGATLSIDGSESEENECETLLLASNSSTFNRITAHGGNLDIRYTKIFSWDLKNEDYDMDPSDGRSYLSAVTEKITGRTKDTCPDDSSSSNGQAKKDMGNANMDIHRSEIGYLGYDGSEAYGISYKARGLCKDHSNLDIFDDDNGLNVGVTGDIYGSDLHHNWFGHYSWGHDGGKWQYNTVHDNHGYGFDPHDDSDKLKIIGNEVYNNGWHGIIASKRCTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------ETSDSKVYKNTLENNKFGVRWSNGANDNRVWRNDIVVEAN--QFAFYIFKGTDPQEAEGNEDGRIRDNSVYKNEIWSDQDLVWKATEAEDNVFWRNVFHGGESAYFGGESKNNKVNNNMFPDG-WEFETDGESCFREGTDPE 468
            G C T+ D+ E R +D    GP++ FDE     +DT TG++YLES ++IT G+ L + G  S+  +C+ LLLAS+   F  + AHGG L +  T + SWDL     D +  DGRSYLSA++E IT   + TC       +G AK DMG A MDI  SE+ +LG+  SE+YGI+YK RG CKD SN ++FD     +V VTGDI GSD+H N+FGHYS+GH GG W +N +H N GYGFDPHDDSD + I  NEV                XXXXXXXXXXX            XXXXXXXXXXXXXXXXXXXX         E+S   V  N +  NK G+R S G++DN ++ NDI++     ++A Y+++G D  +     DGR R+N ++ N + SD ++V K   ++D  F  NV +G  S +   +S N    +N   DG  +++ +  SCF   +D E
Sbjct:   79 GACVTLTDIYESRLDDTGNKGPLYPFDETTLDISDTVTGSWYLESTLYITEGSRLVVQGL-SKGGDCDHLLLASSPEKFINLRAHGGELMLDGTHVESWDLAAGTVDENNEDGRSYLSAISEVITDPAE-TC-------DGTAKNDMGEARMDIIDSEVNHLGWYDSESYGIAYKVRGFCKDLSNPELFD-----SVSVTGDILGSDIHDNYFGHYSYGHQGGNWSHNKMHHNIGYGFDPHDDSDYITIHNNEVXXXXXXXXXXXXXXXXXXXXXXXXXXXGHINEAGQRTGNXXXXXXXXXXXXXXXXXXXXXMDSGVALYESSYCAVSDNKIYGNKNGIRMSLGSSDNLLYENDIIINGPDAKYAIYLYQGNDIPDVS---DGRPRNNHIFDNSLVSDNEVV-KMLNSDDTAFEGNVVYGRVSRFK--DSFNTLWKSNFVEDGIHDYKLELNSCFDPESDIE 522          
BLAST of mRNA_Ecto-sp13_S_contig7968.19267.1 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE)

HSP 1 Score: 249 bits (637), Expect = 5.120e-74
Identity = 165/454 (36.34%), Postives = 231/454 (50.88%), Query Frame = 0
Query:   15 VQGGCATIRDLIEYRTNDGKQIGPIFHFDEDKKWYTDTYTGTYYLESDVFITNGATLSIDGSESEENECETLLLASNSSTFNRITAHGGNLDIRYTKIFSWDLKNEDYDMDPSDGRSYLSAVTEKITGRTKDTCPDDSSSSNGQAKKDMGNANMDIHRSEIGYLGYDGSEAYGISYKARGLCKDHSNLDIFDDDNGLNVGVTGDIYGSDLHHNWFGHYSWGHDGGKWQYNTVHDNHGYGFDPHDDSDKLKIIGNEVYNNGWHGIIASKRCT--DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETSDSKVYKNTLENNKFGVRWSNGANDNRVWRNDIVVEANQFAFYIFKGTDPQEAEGNEDGRIRDNSVYKNEIWSDQDLVWKATEAEDNVFWRNVFHGGESAYFGGESKNNKVNNNMFPDGWEFETDGESCFREGTD 466
             +GGC T+  + E +  DG    P++  D      + + TGT+ L  ++++ +G TL + G  S   + + L L S S TF  + A+GG+LD   TK+F+WD      D D SDGRSY+SAV+E IT        DD  + NG+AK +MG A MDI  SE+ YLGY G+E YG+++K RG C D  N ++FDD     V V G+IY SD+HHN FG Y++GH  G W+ N +HDN GYGFDPHDDSD L I  NEV+NNG+HGIIASKRC                                               E+ ++ V  NT ENNK+GVR S G   N ++  +++  + +F  + + G D  E    + GR +DN   +N I    + +    EA+   F  N F    +  F   +K     N    D    + D  + F E +D
Sbjct:   36 TRGGCVTLEQIWEQQV-DGS---PLYAVDPKSGDVSRSATGTWLLTEEMYVEDGITLQVHGI-SAGGDADELRLLSTSDTFIHLRAYGGSLDFLSTKVFAWDTSKNAPDQDESDGRSYISAVSEVIT--------DDRQTCNGRAKNNMGEARMDIENSEMAYLGYHGTETYGLTWKVRGFCVDKGNPELFDD-----VNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVWNNGYHGIIASKRCNGVSIQGNEVYGGSSGSAGIFLHRSSDNGIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVRLSVGCGRN-IFSKNVITGSAEFNTFSYLGADKPEVV--DSGRSQDNVFMENNIIGGVESIL-LKEADGTQFIDNTFKDAAAIRFVDATKTLMSGNTGLADS-TLKVDRGATFDESSD 466          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7968.19267.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JYM5_9PHAE9.710e-24979.44MEP15 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D7FWK3_ECTSI2.650e-23978.50Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5JUS5_9PHAE1.590e-12755.05MEP12 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D7G339_ECTSI2.340e-8238.41Mannuronan C-5-epimerase n=2 Tax=Ectocarpus silicu... [more]
D7FXE4_ECTSI2.200e-8037.98Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
Q7XAJ7_9PHAE1.210e-7941.78Mannuronan C-5-epimerase n=1 Tax=Laminaria digitat... [more]
D8LD45_ECTSI1.280e-7836.42Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7FZF9_ECTSI3.920e-7741.47Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
D7FZF8_ECTSI1.290e-7643.53Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
Q7XAJ8_9PHAE5.120e-7436.34Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 387..423
e-value: 9600.0
score: 0.2
coord: 260..282
e-value: 20.0
score: 14.1
coord: 308..330
e-value: 230.0
score: 10.6
coord: 331..352
e-value: 350.0
score: 10.0
coord: 284..306
e-value: 0.023
score: 23.8
coord: 236..258
e-value: 6500.0
score: 1.4
IPR007742Periplasmic copper-binding protein NosD, beta helix domainPFAMPF05048NosDcoord: 232..371
e-value: 3.1E-14
score: 52.8
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 7..382
e-value: 3.3E-88
score: 298.2
IPR022441Parallel beta-helix repeat-2TIGRFAMTIGR03804TIGR03804coord: 307..345
e-value: 3.0E-7
score: 28.0
coord: 283..322
e-value: 8.5E-7
score: 26.6
NoneNo IPR availablePANTHERPTHR22990F-BOX ONLY PROTEINcoord: 242..461
NoneNo IPR availablePANTHERPTHR22990:SF15F-BOX ONLY PROTEIN 10coord: 242..461
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 54..442

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7968contigEcto-sp13_S_contig7968:113..5552 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7968.19267.1mRNA_Ecto-sp13_S_contig7968.19267.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7968 113..5552 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7968.19267.1 ID=prot_Ecto-sp13_S_contig7968.19267.1|Name=mRNA_Ecto-sp13_S_contig7968.19267.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=470bp
RTSPTISYNDGALHVQGGCATIRDLIEYRTNDGKQIGPIFHFDEDKKWYT
DTYTGTYYLESDVFITNGATLSIDGSESEENECETLLLASNSSTFNRITA
HGGNLDIRYTKIFSWDLKNEDYDMDPSDGRSYLSAVTEKITGRTKDTCPD
DSSSSNGQAKKDMGNANMDIHRSEIGYLGYDGSEAYGISYKARGLCKDHS
NLDIFDDDNGLNVGVTGDIYGSDLHHNWFGHYSWGHDGGKWQYNTVHDNH
GYGFDPHDDSDKLKIIGNEVYNNGWHGIIASKRCTDITIKKNTVYNNGRH
GIMLHRSCDRANVRENYAYNNGEAGIALFETSDSKVYKNTLENNKFGVRW
SNGANDNRVWRNDIVVEANQFAFYIFKGTDPQEAEGNEDGRIRDNSVYKN
EIWSDQDLVWKATEAEDNVFWRNVFHGGESAYFGGESKNNKVNNNMFPDG
WEFETDGESCFREGTDPEC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006626PbH1
IPR007742NosD_dom
IPR012334Pectin_lyas_fold
IPR022441Para_beta_helix_rpt-2
IPR011050Pectin_lyase_fold/virulence