prot_Ecto-sp13_S_contig7953.19247.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7953.19247.1
Unique Nameprot_Ecto-sp13_S_contig7953.19247.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length84
Homology
BLAST of mRNA_Ecto-sp13_S_contig7953.19247.1 vs. uniprot
Match: A0A6H5K3K8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3K8_9PHAE)

HSP 1 Score: 68.6 bits (166), Expect = 1.220e-13
Identity = 32/43 (74.42%), Postives = 36/43 (83.72%), Query Frame = 0
Query:    3 LQGKYSEAEPLYERSLAIRQKALGFDHPDVAQSLNNYAELLRA 45
            +QGKY EAEPLYERS AI++K LG +HPDVA SLNN  ELLRA
Sbjct:   17 IQGKYMEAEPLYERSQAIQEKVLGLEHPDVASSLNNRVELLRA 59          
BLAST of mRNA_Ecto-sp13_S_contig7953.19247.1 vs. uniprot
Match: A0A6H5KIY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIY6_9PHAE)

HSP 1 Score: 67.8 bits (164), Expect = 2.340e-11
Identity = 33/45 (73.33%), Postives = 37/45 (82.22%), Query Frame = 0
Query:    1 LVLQGKYSEAEPLYERSLAIRQKALGFDHPDVAQSLNNYAELLRA 45
            L+ QGKY +A PLY+RSLAI +K  G DHPDVAQSLNN AELLRA
Sbjct:  413 LIFQGKYDQAGPLYDRSLAILEKVHGPDHPDVAQSLNNRAELLRA 457          
BLAST of mRNA_Ecto-sp13_S_contig7953.19247.1 vs. uniprot
Match: A0A6H5K8Z8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Z8_9PHAE)

HSP 1 Score: 64.3 bits (155), Expect = 2.790e-11
Identity = 34/45 (75.56%), Postives = 37/45 (82.22%), Query Frame = 0
Query:    1 LVLQGKYSEAEPLYERSLAIRQKALGFDHPDVAQSLNNYAELLRA 45
            L  QGKY +AE LYERSLAIR+K LG +HPDVAQSLNN  ELLRA
Sbjct:   13 LKAQGKYDDAEQLYERSLAIREKVLGPEHPDVAQSLNN-RELLRA 56          
BLAST of mRNA_Ecto-sp13_S_contig7953.19247.1 vs. uniprot
Match: A0A6H5K4D0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4D0_9PHAE)

HSP 1 Score: 67.4 bits (163), Expect = 3.330e-11
Identity = 34/45 (75.56%), Postives = 37/45 (82.22%), Query Frame = 0
Query:    1 LVLQGKYSEAEPLYERSLAIRQKALGFDHPDVAQSLNNYAELLRA 45
            L  QGKY EA  LYERSLAIR+KALG DHPDVAQSLNN+A LL +
Sbjct:  828 LKAQGKYDEAGKLYERSLAIREKALGPDHPDVAQSLNNWAVLLES 872          
BLAST of mRNA_Ecto-sp13_S_contig7953.19247.1 vs. uniprot
Match: A0A2W4QJT5_9GAMM (Uncharacterized protein n=1 Tax=Candidatus Methylumidiphilus alinenensis TaxID=2202197 RepID=A0A2W4QJT5_9GAMM)

HSP 1 Score: 62.0 bits (149), Expect = 9.380e-11
Identity = 30/39 (76.92%), Postives = 33/39 (84.62%), Query Frame = 0
Query:    4 QGKYSEAEPLYERSLAIRQKALGFDHPDVAQSLNNYAEL 42
            QGKY+EAEPLY+ SLAI +KALG DHPDVA SLNN A L
Sbjct:    8 QGKYAEAEPLYQSSLAIAEKALGKDHPDVAVSLNNLAGL 46          
BLAST of mRNA_Ecto-sp13_S_contig7953.19247.1 vs. uniprot
Match: A0A3B8JJF2_9CYAN (Tetratricopeptide repeat-containing protein (Fragment) n=1 Tax=Cyanobacteria bacterium UBA8553 TaxID=2055771 RepID=A0A3B8JJF2_9CYAN)

HSP 1 Score: 60.8 bits (146), Expect = 1.010e-10
Identity = 28/40 (70.00%), Postives = 35/40 (87.50%), Query Frame = 0
Query:    3 LQGKYSEAEPLYERSLAIRQKALGFDHPDVAQSLNNYAEL 42
            +QG YS+AEPLY+RSLAI +KALG +HP+VA SLNN A+L
Sbjct:    8 VQGNYSQAEPLYQRSLAIWEKALGSEHPNVATSLNNLADL 47          
BLAST of mRNA_Ecto-sp13_S_contig7953.19247.1 vs. uniprot
Match: A0A6H5JJK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJK0_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 1.570e-10
Identity = 32/42 (76.19%), Postives = 34/42 (80.95%), Query Frame = 0
Query:    1 LVLQGKYSEAEPLYERSLAIRQKALGFDHPDVAQSLNNYAEL 42
            +  QGKY EA PLYERSLAIR+K LG DHPDVAQSLNN A L
Sbjct:  795 ITFQGKYEEAGPLYERSLAIREKVLGPDHPDVAQSLNNRALL 836          
BLAST of mRNA_Ecto-sp13_S_contig7953.19247.1 vs. uniprot
Match: D7G722_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G722_ECTSI)

HSP 1 Score: 63.9 bits (154), Expect = 5.500e-10
Identity = 30/41 (73.17%), Postives = 36/41 (87.80%), Query Frame = 0
Query:    3 LQGKYSEAEPLYERSLAIRQKALGFDHPDVAQSLNNYAELL 43
            +QGKY+EAEPLYERSLAI++K LG +HPDVA SL+N A LL
Sbjct:  692 IQGKYAEAEPLYERSLAIQEKVLGPEHPDVATSLDNRASLL 732          
BLAST of mRNA_Ecto-sp13_S_contig7953.19247.1 vs. uniprot
Match: A0A838VSY7_9NOST (CHAT domain-containing protein n=1 Tax=Nostocaceae cyanobacterium TaxID=2723028 RepID=A0A838VSY7_9NOST)

HSP 1 Score: 62.4 bits (150), Expect = 1.870e-9
Identity = 29/38 (76.32%), Postives = 33/38 (86.84%), Query Frame = 0
Query:    7 YSEAEPLYERSLAIRQKALGFDHPDVAQSLNNYAELLR 44
            Y +AEPLY+RSLAIR+K LG +HPDVAQSLNN AEL R
Sbjct:    2 YQQAEPLYQRSLAIREKVLGKEHPDVAQSLNNLAELYR 39          
BLAST of mRNA_Ecto-sp13_S_contig7953.19247.1 vs. uniprot
Match: G3IYX2_METTV (Tetratricopeptide TPR_1 repeat-containing protein n=1 Tax=Methylobacter tundripaludum (strain ATCC BAA-1195 / DSM 17260 / SV96) TaxID=697282 RepID=G3IYX2_METTV)

HSP 1 Score: 62.0 bits (149), Expect = 2.560e-9
Identity = 30/40 (75.00%), Postives = 34/40 (85.00%), Query Frame = 0
Query:    5 GKYSEAEPLYERSLAIRQKALGFDHPDVAQSLNNYAELLR 44
            GKYSEAEPL +RSLAIR+KALG +HPDVA SLNN A L +
Sbjct:  303 GKYSEAEPLLQRSLAIREKALGEEHPDVATSLNNLAVLYK 342          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7953.19247.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K3K8_9PHAE1.220e-1374.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KIY6_9PHAE2.340e-1173.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8Z8_9PHAE2.790e-1175.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K4D0_9PHAE3.330e-1175.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2W4QJT5_9GAMM9.380e-1176.92Uncharacterized protein n=1 Tax=Candidatus Methylu... [more]
A0A3B8JJF2_9CYAN1.010e-1070.00Tetratricopeptide repeat-containing protein (Fragm... [more]
A0A6H5JJK0_9PHAE1.570e-1076.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G722_ECTSI5.500e-1073.17NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A838VSY7_9NOST1.870e-976.32CHAT domain-containing protein n=1 Tax=Nostocaceae... [more]
G3IYX2_METTV2.560e-975.00Tetratricopeptide TPR_1 repeat-containing protein ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..84
e-value: 7.3E-37
score: 129.0
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 2..83
NoneNo IPR availablePFAMPF13424TPR_12coord: 3..65
e-value: 1.9E-20
score: 72.9
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 4..82
NoneNo IPR availablePANTHERPTHR45783:SF3KINESIN LIGHT CHAINcoord: 4..82
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 33..66
score: 8.467
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1..66
score: 11.888

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7953contigEcto-sp13_S_contig7953:3603..4153 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7953.19247.1mRNA_Ecto-sp13_S_contig7953.19247.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7953 3603..4153 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7953.19247.1 ID=prot_Ecto-sp13_S_contig7953.19247.1|Name=mRNA_Ecto-sp13_S_contig7953.19247.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=84bp
LVLQGKYSEAEPLYERSLAIRQKALGFDHPDVAQSLNNYAELLRAQGKYD
EAEPLYERSLAIREKALGPEHPDVAQSLNNRARL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR019734TPR_repeat
IPR013026TPR-contain_dom