prot_Ecto-sp13_S_contig78920.19166.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig78920.19166.1
Unique Nameprot_Ecto-sp13_S_contig78920.19166.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length57
Homology
BLAST of mRNA_Ecto-sp13_S_contig78920.19166.1 vs. uniprot
Match: D7FZ03_ECTSI (CRC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ03_ECTSI)

HSP 1 Score: 114 bits (285), Expect = 4.290e-32
Identity = 50/52 (96.15%), Postives = 52/52 (100.00%), Query Frame = 0
Query:    4 YCQCFAGQLVCSDSCKCENCYNSAEHGVERRAAVRELLCRSPHAFDAKFKTE 55
            YCQCFAGQLVCSD+C+CENCYNSAEHGVERRAAVRELLCRSPHAFDAKFKTE
Sbjct:    6 YCQCFAGQLVCSDACRCENCYNSAEHGVERRAAVRELLCRSPHAFDAKFKTE 57          
BLAST of mRNA_Ecto-sp13_S_contig78920.19166.1 vs. uniprot
Match: A0A6H5K1G5_9PHAE (CRC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1G5_9PHAE)

HSP 1 Score: 117 bits (293), Expect = 3.930e-31
Identity = 52/55 (94.55%), Postives = 54/55 (98.18%), Query Frame = 0
Query:    1 MGRYCQCFAGQLVCSDSCKCENCYNSAEHGVERRAAVRELLCRSPHAFDAKFKTE 55
            M RYCQCFAGQLVCSD+C+CENCYNSAEHGVERRAAVRELLCRSPHAFDAKFKTE
Sbjct:    1 MRRYCQCFAGQLVCSDACRCENCYNSAEHGVERRAAVRELLCRSPHAFDAKFKTE 55          
BLAST of mRNA_Ecto-sp13_S_contig78920.19166.1 vs. uniprot
Match: UPI000E45C759 (protein lin-54 homolog n=1 Tax=Mastacembelus armatus TaxID=205130 RepID=UPI000E45C759)

HSP 1 Score: 58.9 bits (141), Expect = 1.010e-8
Identity = 25/51 (49.02%), Postives = 35/51 (68.63%), Query Frame = 0
Query:    2 GRYCQCFAGQLVCSDSCKCENCYNSAEHGVERRAAVRELLCRSPHAFDAKF 52
            GRYC CFA  ++CS+ C C NC+N+AEH ++R  A++  L R+P AF  K 
Sbjct:  222 GRYCDCFANGVMCSN-CDCSNCHNNAEHEMKRHRAIKSCLGRNPDAFRPKI 271          
BLAST of mRNA_Ecto-sp13_S_contig78920.19166.1 vs. uniprot
Match: UPI001C89BA63 (spexin prohormone 2 isoform X4 n=2 Tax=Puntigrus tetrazona TaxID=1606681 RepID=UPI001C89BA63)

HSP 1 Score: 58.5 bits (140), Expect = 1.310e-8
Identity = 26/49 (53.06%), Postives = 33/49 (67.35%), Query Frame = 0
Query:    4 YCQCFAGQLVCSDSCKCENCYNSAEHGVERRAAVRELLCRSPHAFDAKF 52
            YC+CFA    C D+CKC NCYN+AEH +ER  A++  L R+P AF  K 
Sbjct:  147 YCECFANGDAC-DNCKCLNCYNNAEHNLERSQAIKVCLDRNPGAFQRKI 194          
BLAST of mRNA_Ecto-sp13_S_contig78920.19166.1 vs. uniprot
Match: UPI001C8A733A (spexin prohormone 2 isoform X3 n=1 Tax=Puntigrus tetrazona TaxID=1606681 RepID=UPI001C8A733A)

HSP 1 Score: 58.5 bits (140), Expect = 1.400e-8
Identity = 26/49 (53.06%), Postives = 33/49 (67.35%), Query Frame = 0
Query:    4 YCQCFAGQLVCSDSCKCENCYNSAEHGVERRAAVRELLCRSPHAFDAKF 52
            YC+CFA    C D+CKC NCYN+AEH +ER  A++  L R+P AF  K 
Sbjct:  307 YCECFANGDAC-DNCKCLNCYNNAEHNLERSQAIKVCLDRNPGAFQRKI 354          
BLAST of mRNA_Ecto-sp13_S_contig78920.19166.1 vs. uniprot
Match: UPI001C894F53 (spexin prohormone 2 isoform X1 n=2 Tax=Puntigrus tetrazona TaxID=1606681 RepID=UPI001C894F53)

HSP 1 Score: 58.5 bits (140), Expect = 1.410e-8
Identity = 26/49 (53.06%), Postives = 33/49 (67.35%), Query Frame = 0
Query:    4 YCQCFAGQLVCSDSCKCENCYNSAEHGVERRAAVRELLCRSPHAFDAKF 52
            YC+CFA    C D+CKC NCYN+AEH +ER  A++  L R+P AF  K 
Sbjct:  307 YCECFANGDAC-DNCKCLNCYNNAEHNLERSQAIKVCLDRNPGAFQRKI 354          
BLAST of mRNA_Ecto-sp13_S_contig78920.19166.1 vs. uniprot
Match: A0A8J1JIR6_XENTR (protein lin-54 homolog isoform X3 n=1 Tax=Xenopus tropicalis TaxID=8364 RepID=A0A8J1JIR6_XENTR)

HSP 1 Score: 55.8 bits (133), Expect = 4.880e-8
Identity = 25/50 (50.00%), Postives = 33/50 (66.00%), Query Frame = 0
Query:    4 YCQCFAGQLVCSDSCKCENCYNSAEHGVERRAAVRELLCRSPHAFDAKFK 53
            YC CFA   +C++ C C NCYN+AEH +ER  AV+  L R+P AF  K +
Sbjct:   83 YCDCFANGDLCNN-CNCSNCYNNAEHELERFKAVKACLYRNPDAFQPKIE 131          
BLAST of mRNA_Ecto-sp13_S_contig78920.19166.1 vs. uniprot
Match: A0A8J0T2R3_XENTR (protein lin-54 homolog isoform X1 n=2 Tax=Xenopus tropicalis TaxID=8364 RepID=A0A8J0T2R3_XENTR)

HSP 1 Score: 55.8 bits (133), Expect = 8.620e-8
Identity = 25/50 (50.00%), Postives = 33/50 (66.00%), Query Frame = 0
Query:    4 YCQCFAGQLVCSDSCKCENCYNSAEHGVERRAAVRELLCRSPHAFDAKFK 53
            YC CFA   +C++ C C NCYN+AEH +ER  AV+  L R+P AF  K +
Sbjct:   83 YCDCFANGDLCNN-CNCSNCYNNAEHELERFKAVKACLYRNPDAFQPKIE 131          
BLAST of mRNA_Ecto-sp13_S_contig78920.19166.1 vs. uniprot
Match: A0BGH5_PARTE (CRC domain-containing protein n=2 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0BGH5_PARTE)

HSP 1 Score: 54.7 bits (130), Expect = 3.180e-7
Identity = 23/50 (46.00%), Postives = 31/50 (62.00%), Query Frame = 0
Query:    4 YCQCFAGQLVCSDSCKCENCYNSAEHGVERRAAVRELLCRSPHAFDAKFK 53
            YC+CFA   VCS SC C++C N  ++  ER  A+ E L R+P AF   F+
Sbjct:  203 YCECFANNWVCSQSCNCQDCKNRIDNPQERSKAIEEALLRNPDAFAQCFQ 252          
BLAST of mRNA_Ecto-sp13_S_contig78920.19166.1 vs. uniprot
Match: A0A8C5R0Z5_9ANUR (Testis expressed metallothionein like protein n=1 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5R0Z5_9ANUR)

HSP 1 Score: 53.5 bits (127), Expect = 8.200e-7
Identity = 25/49 (51.02%), Postives = 31/49 (63.27%), Query Frame = 0
Query:    4 YCQCFAGQLVCSDSCKCENCYNSAEHGVERRAAVRELLCRSPHAFDAKF 52
            YC CFA    CSD C C NC+N+AEH ++R  AV+  L R+P AF  K 
Sbjct:  269 YCDCFANGDFCSD-CNCNNCFNNAEHELDRFRAVKTCLDRNPEAFLPKI 316          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig78920.19166.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D7FZ03_ECTSI4.290e-3296.15CRC domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5K1G5_9PHAE3.930e-3194.55CRC domain-containing protein n=1 Tax=Ectocarpus s... [more]
UPI000E45C7591.010e-849.02protein lin-54 homolog n=1 Tax=Mastacembelus armat... [more]
UPI001C89BA631.310e-853.06spexin prohormone 2 isoform X4 n=2 Tax=Puntigrus t... [more]
UPI001C8A733A1.400e-853.06spexin prohormone 2 isoform X3 n=1 Tax=Puntigrus t... [more]
UPI001C894F531.410e-853.06spexin prohormone 2 isoform X1 n=2 Tax=Puntigrus t... [more]
A0A8J1JIR6_XENTR4.880e-850.00protein lin-54 homolog isoform X3 n=1 Tax=Xenopus ... [more]
A0A8J0T2R3_XENTR8.620e-850.00protein lin-54 homolog isoform X1 n=2 Tax=Xenopus ... [more]
A0BGH5_PARTE3.180e-746.00CRC domain-containing protein n=2 Tax=Paramecium t... [more]
A0A8C5R0Z5_9ANUR8.200e-751.02Testis expressed metallothionein like protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033467Tesmin/TSO1-like CXC domainSMARTSM01114CXC_2coord: 1..29
e-value: 0.0072
score: 15.1
IPR005172CRC domainPFAMPF03638TCRcoord: 3..26
e-value: 1.3E-6
score: 28.6
IPR005172CRC domainPROSITEPS51634CRCcoord: 1..57
score: 12.242
IPR028307Lin-54 familyPANTHERPTHR12446TESMIN/TSO1-RELATEDcoord: 4..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig78920contigEcto-sp13_S_contig78920:443..613 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig78920.19166.1mRNA_Ecto-sp13_S_contig78920.19166.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig78920 443..613 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig78920.19166.1 ID=prot_Ecto-sp13_S_contig78920.19166.1|Name=mRNA_Ecto-sp13_S_contig78920.19166.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=57bp
MGRYCQCFAGQLVCSDSCKCENCYNSAEHGVERRAAVRELLCRSPHAFDA
KFKTEVR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033467Tesmin/TSO1-like_CXC
IPR005172CRC
IPR028307Lin-54_fam