prot_Ecto-sp13_S_contig7850.19117.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7850.19117.1
Unique Nameprot_Ecto-sp13_S_contig7850.19117.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length203
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7850.19117.1 vs. uniprot
Match: D8LTU0_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTU0_ECTSI)

HSP 1 Score: 137 bits (346), Expect = 1.950e-37
Identity = 109/168 (64.88%), Postives = 114/168 (67.86%), Query Frame = 0 
Query:   34 SSSGSSTMQVVPQHYVSLMGSRRTSAEDFLSLLQDSEELQAREVPSMQDEEPDDSSQXXXXXXXXXQHALLPPPGRVPQNGGGGSSVAAHPTSTPHPPQEATPRAAXXSAPAAPTXXXXXAGDKALASEGGVPSAAGATAAETSGGEGRWTGDISSNFFSGPTSFSKG 201
            SSSGSSTMQVVPQHY+SLMGSRRTSAEDFLSLLQDSEELQAREVPSMQDEEP+DSS  XXXXXXXXQHALLPPPGRVPQNG                         XXSAPAA   XXXX                     E SGG+GRWTGD+SS+FFSGPT  SKG
Sbjct:   11 SSSGSSTMQVVPQHYLSLMGSRRTSAEDFLSLLQDSEELQAREVPSMQDEEPEDSS--XXXXXXXXQHALLPPPGRVPQNGXXXXXXXXXXXXXXXXXXXXXXXXXXXSAPAARAAXXXXXXXXXXXXXXXXXXXXXXXXXEASGGDGRWTGDVSSSFFSGPTPLSKG 176
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BLAST of mRNA_Ecto-sp13_S_contig7850.19117.1 vs. uniprot
Match: A0A6H5K231_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K231_9PHAE)

HSP 1 Score: 110 bits (274), Expect = 2.260e-24
Identity = 96/160 (60.00%), Postives = 101/160 (63.12%), Query Frame = 0 
Query:   41 MQVVPQHYVSLMGSRRTSAEDFLSLLQDSEELQAREVPSMQDEEPDDSSQXXXXXXXXXQHALLPPPGRVPQNGGGGSSVAAHPTSTPHPPQEATPRAAXXSAPAAPTXXXXXAGDKALASEGGVPSAAGATAAETSGGEGRWTGDISSNFFSGPTSFSK 200
            + VVPQH++SLMG+RRTSAEDFLSL      LQAREVPSMQDEE DDSS XXXXXXXXXQHALLPPPGRVPQNG                         XX       XXXXX           VPSAAGAT AE SGG+GRWT DISS FFSG T  SK
Sbjct:  459 LPVVPQHFLSLMGARRTSAEDFLSL------LQAREVPSMQDEESDDSSXXXXXXXXXXQHALLPPPGRVPQNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPSAAGATEAEASGGDGRWTDDISSTFFSGSTPLSK 612
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7850.19117.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LTU0_ECTSI1.950e-3764.88Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5K231_9PHAE2.260e-2460.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7850contigEcto-sp13_S_contig7850:698..2415 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7850.19117.1mRNA_Ecto-sp13_S_contig7850.19117.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7850 606..2415 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7850.19117.1 ID=prot_Ecto-sp13_S_contig7850.19117.1|Name=mRNA_Ecto-sp13_S_contig7850.19117.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=203bp
MVLFLVKVESMHQLQQQHVLGGGQSLSAGGANGSSSGSSTMQVVPQHYVS
LMGSRRTSAEDFLSLLQDSEELQAREVPSMQDEEPDDSSQSQPQPQPQPQ
HALLPPPGRVPQNGGGGSSVAAHPTSTPHPPQEATPRAAAASAPAAPTAT
APAAGDKALASEGGVPSAAGATAAETSGGEGRWTGDISSNFFSGPTSFSK
GGG
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