prot_Ecto-sp13_S_contig12271.1908.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12271.1908.1
Unique Nameprot_Ecto-sp13_S_contig12271.1908.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length155
Homology
BLAST of mRNA_Ecto-sp13_S_contig12271.1908.1 vs. uniprot
Match: D7G5K1_ECTSI (Hypothetical leucine rich repeat calcium binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5K1_ECTSI)

HSP 1 Score: 297 bits (760), Expect = 1.640e-90
Identity = 152/155 (98.06%), Postives = 154/155 (99.35%), Query Frame = 0
Query:    1 LYRLVHRQKQTVDDDEVLEESEFTPRRLFLRDTLARGITPSPTMMRSRKDPHTLDLGFQGLGDQIGLSLATTLPLLPNLASLNLRENRLTDASLDNILAEAVRLECLTSLDLSCNKIDHSALVLREYVASARCKLQRLSLSNADVDDDECNSLME 155
            LYRLVHRQKQTVDDDE LEESEFTPRRLFLRDTLARGITPSPTMMR+RKDPHTLDLGFQGLGDQIGLSLATTLPLLPNLASLNLRENRLTDASL+NILAEAVRLECLTSLDLSCNKIDHSALVLREYVASARCKLQRLSLSNADVDDDECNSLME
Sbjct:  214 LYRLVHRQKQTVDDDEALEESEFTPRRLFLRDTLARGITPSPTMMRNRKDPHTLDLGFQGLGDQIGLSLATTLPLLPNLASLNLRENRLTDASLNNILAEAVRLECLTSLDLSCNKIDHSALVLREYVASARCKLQRLSLSNADVDDDECNSLME 368          
BLAST of mRNA_Ecto-sp13_S_contig12271.1908.1 vs. uniprot
Match: A0A067CIT8_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CIT8_SAPPC)

HSP 1 Score: 89.4 bits (220), Expect = 8.830e-18
Identity = 55/142 (38.73%), Postives = 77/142 (54.23%), Query Frame = 0
Query:   13 DDDE----VLEESEFTPRRLFLRDTLARGITPSPTMMRSRKDPHTLDLGFQGLGDQIGLSLATTLPLLPNLASLNLRENRLTDASLDNILAEAVRLECLTSLDLSCNKIDHSAL-VLREYVASARCKLQRLSLSNADVDDDE 149
            DDDE     +    FT R  F    L R + PS  ++  +     +D+   G+GD +    A ++  +PN+ SLNLR NRLTDA L +I+A  +   C+  LDLS NK+D   +  L  Y+ S  C LQ L +S+ADVDD E
Sbjct:  101 DDDEPDFDTMLCEPFTARHEFASRCLERELPPSAGLLLRKTQTAEIDISHYGMGDDLARVWAASIVDVPNVTSLNLRNNRLTDAGLPSIIAALIAKPCIAILDLSENKLDSECVDALATYLQSPVCALQELRMSHADVDDAE 242          
BLAST of mRNA_Ecto-sp13_S_contig12271.1908.1 vs. uniprot
Match: A0A835YQG6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQG6_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 1.030e-16
Identity = 46/110 (41.82%), Postives = 67/110 (60.91%), Query Frame = 0
Query:   20 ESEFTPRRLFLRDTLARGITPSPTMMRSRKDPHTLDLGFQGLGDQIGLSLATTLPLLPNLASLNLRENRLTDASLDNILAEAVRLECLTSLDLSCNKIDHSALVLREYVA 129
            E+  TPR+ FLR  LA G  P P ++R    P  L+L  + LGD++  ++A  LP LP + S+N+ +NRLTDASL  +    V +  L  LDL  NK+D +A ++R Y+A
Sbjct:  724 EAGHTPRQAFLRRLLAVGAPPLPALLRHTAHPDELNLEHKALGDKVVAAVAAVLPRLPCVRSVNVADNRLTDASLVPLCRTVVAMPALARLDLGFNKVDDAARIIRAYLA 833          
BLAST of mRNA_Ecto-sp13_S_contig12271.1908.1 vs. uniprot
Match: A0A1V9ZJY5_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZJY5_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 1.940e-16
Identity = 53/149 (35.57%), Postives = 76/149 (51.01%), Query Frame = 0
Query:    2 YRLVHRQKQTVDDDEVLEESEFTPRRLFLRDTLARGITPSPTMMRSRKDPHTLDLGFQGLGDQIGLSLATTLPLLPNLASLNLRENRLTDASLDNILAEAVRLECLTSLDLSCNKIDHSAL-VLREYVASARCKLQRLSLSNADVDDDE 149
            YR V  +     D + +    FT R  F    L + + PS  ++        +++   G+GD + +  A  +  +PN+ SLNLR NRLTDA L +++A       +  LDLS NK+D  A+  L  Y+A   C LQ L LS ADVDD E
Sbjct:   93 YRAVVPECDDEPDFDTMLTDPFTARHEFAAQCLTKNVLPSAGLLLRSTISQEINVSHMGIGDDVAVVWAAAIGGVPNVTSLNLRNNRLTDAGLPSVIAALTTKPEIVVLDLSENKLDGEAINALAAYLAEQSCALQELRLSRADVDDIE 241          
BLAST of mRNA_Ecto-sp13_S_contig12271.1908.1 vs. uniprot
Match: A0A6A3WSG6_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3WSG6_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 1.510e-14
Identity = 52/141 (36.88%), Postives = 73/141 (51.77%), Query Frame = 0
Query:   14 DDEVLEESEFTPRRLFLRDTLARGITPSPTMMRSRKDPHTLDLGFQGLGDQIGLSLATTLPLLPNLASLNLRENRLTDASLDNILAEAVRLECLTSLDLSCNKID-HSALVLREYVASARCKLQRLSLSNADVDDDECNSL 153
            D  +L     +PR LFL   LA    P   ++R   +    D   QGLGD   +  A  LP LP + S+N+ +NRLTDA++  +L        LTSLD+S N +   +A VLR Y+ S  C L+ L+L+   + D EC  L
Sbjct:  269 DKNLLSAVPRSPRALFLGACLAGSQAPPTLLLRKEHNKRAFDFSHQGLGDNFIVRFAACLPELPLVESINVCDNRLTDAAISCLLRALENKPHLTSLDVSSNPMGVDAASVLRGYIRSNLCTLRVLALNEIALSDHECARL 409          
BLAST of mRNA_Ecto-sp13_S_contig12271.1908.1 vs. uniprot
Match: D7FVI7_ECTSI (Hypothetical leucine rich repeat calcium binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVI7_ECTSI)

HSP 1 Score: 79.3 bits (194), Expect = 2.840e-14
Identity = 51/155 (32.90%), Postives = 71/155 (45.81%), Query Frame = 0
Query:    1 LYRLVHRQKQTVDDDEVLEESEFTPRRLFLRDTLARGITPSPTMMRSRKDPHTLDLGFQGLGDQIGLSLATTLPLLPNLASLNLRENRLTDASLDNILAEAVRLECLTSLDLSCNKIDHSALVLREYVASARCKLQRLSLSNADVDDDECNSLME 155
            LYR + RQ + V D   L +   TPR+ F+R  L  G  P P ++R       L+L  +GLGD +  + A  L  LP++ +LN                                  D +A ++R Y+A   C LQ LSL +ADVDD+EC  LME
Sbjct:  620 LYRRMARQVEIVGDTGALSQEGHTPRQEFIRKMLKMGRVPVPILLRDPSALQDLNLAHRGLGDDVMSAAAEVLTRLPHINTLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEAAAIIRGYLAHPSCSLQTLSLRSADVDDNECCDLME 774          
BLAST of mRNA_Ecto-sp13_S_contig12271.1908.1 vs. uniprot
Match: G5ABF5_PHYSP (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5ABF5_PHYSP)

HSP 1 Score: 76.3 bits (186), Expect = 3.130e-13
Identity = 49/131 (37.40%), Postives = 68/131 (51.91%), Query Frame = 0
Query:   24 TPRRLFLRDTLARGITPSPTMMRSRKDPHTLDLGFQGLGDQIGLSLATTLPLLPNLASLNLRENRLTDASLDNILAEAVRLECLTSLDLSCNKID-HSALVLREYVASARCKLQRLSLSNADVDDDECNSL 153
            +PR LFL   LA    P   ++R   +    D   QGL D   +  A  LP LP + S+N+ +NRLTDA +  +L        LTSLD+S N +   +A VLR Y+ S  C L+ L+L+   + D EC  L
Sbjct:  173 SPRALFLGACLAGSQAPLTLLLRKEHNKRAFDFSHQGLDDNFIVRFAACLPELPLVESINVCDNRLTDAGISCLLRALENKPHLTSLDVSSNPMGIDAANVLRGYIRSNLCTLRVLALNEISLSDQECARL 303          
BLAST of mRNA_Ecto-sp13_S_contig12271.1908.1 vs. uniprot
Match: A0A835YH25_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YH25_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 2.910e-12
Identity = 46/111 (41.44%), Postives = 62/111 (55.86%), Query Frame = 0
Query:   54 LDLGFQGLGDQIGLSLATTLPLLPNLASLNLRENRLTDASLDNILAEAVRLECLTSLDLSCNKIDHSALVLREYVASA----------RCKLQRLSLSNADVDDDECNSLM 154
            L L  +GLGD +GL+LA  L LLP L +L+LR+NRLTDASL  ++  AV             ++D +A  LR ++A +           C L+ L LS ADVDD EC  +M
Sbjct:  335 LRLAHRGLGDALGLALARALRLLPGLDTLDLRDNRLTDASLVPLVDAAVXXXXXXXXXXXXXEVDAAAAALRAHLARSGSXXXXXXXXACALRALGLSRADVDDGECAEIM 445          
BLAST of mRNA_Ecto-sp13_S_contig12271.1908.1 vs. uniprot
Match: A0A225WZX9_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WZX9_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 1.830e-11
Identity = 50/138 (36.23%), Postives = 74/138 (53.62%), Query Frame = 0
Query:   22 EFTPRRLFLRDTLARGITPSPTMMRSRKDPHTLDLGFQGLGDQIGLSLATTLPL-LPNLASLNLRENRLTDASLDNIL---AEAVRLECLTSLDLSCNKID-HSALVLREYVASARCKLQRLSLSNADVDDDECNSLM 154
            + +PR  FL    A+     P ++R+R +    D  FQ LGD    + A +L   LP +  +++R+NRLTD  L+ +L   +E      L  LD+S N+I   SA  LR Y+ S  C ++ L + NAD+DD EC S M
Sbjct:  355 KLSPRAHFLASCTAKSQVVVPFLIRNR-NTKVFDFSFQSLGDASISAFAKSLVHDLPFVEEISVRDNRLTDDGLNELLQAVSEGSSTMSLRRLDISQNQIGPKSAQTLRSYLVSPSCTVEMLHVDNADIDDHECASFM 491          
BLAST of mRNA_Ecto-sp13_S_contig12271.1908.1 vs. uniprot
Match: A0A7S3ZIZ3_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZIZ3_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 3.390e-11
Identity = 48/144 (33.33%), Postives = 77/144 (53.47%), Query Frame = 0
Query:   15 DEVLEESEFTPRRL---FLRDTLARGITPSPTMMRSRKDPHTLDLGFQGLGDQIGLSLATTLPLLPNLASLNLRENRLTDASLDNILAEAVRLECLTSLDLSCNKIDHSAL-VLREYVASARCKLQRLSLSNADVDDDECNSLM 154
            DE LEE    P+++   F +  +  G+ P P +++  +D   L L      D +  ++A  LP LP+L  +++ +NRL D +L  I+        +TSLDLS NKID  A   +   + +    L+ L +S+ADVDD EC +L+
Sbjct:  271 DEYLEEESDHPQQIARDFNKVLVDLGVAPKPALLKQTRDG-VLALRALCPNDAVARAIAKVLPRLPHLYKVDIADNRLGDVALKEIVDAVNTTSTITSLDLSRNKIDDEASEAIMALIGNHEHGLKELVMSDADVDDGECATLI 413          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12271.1908.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D7G5K1_ECTSI1.640e-9098.06Hypothetical leucine rich repeat calcium binding p... [more]
A0A067CIT8_SAPPC8.830e-1838.73Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A835YQG6_9STRA1.030e-1641.82Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A1V9ZJY5_9STRA1.940e-1635.57Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A6A3WSG6_9STRA1.510e-1436.88Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
D7FVI7_ECTSI2.840e-1432.90Hypothetical leucine rich repeat calcium binding p... [more]
G5ABF5_PHYSP3.130e-1337.40Uncharacterized protein (Fragment) n=1 Tax=Phytoph... [more]
A0A835YH25_9STRA2.910e-1241.44Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A225WZX9_9STRA1.830e-1136.23Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
A0A7S3ZIZ3_9STRA3.390e-1133.33Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 21..155
e-value: 3.7E-16
score: 60.3
NoneNo IPR availablePANTHERPTHR24113FAMILY NOT NAMEDcoord: 53..152
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 52..155

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12271contigEcto-sp13_S_contig12271:659..2278 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12271.1908.1mRNA_Ecto-sp13_S_contig12271.1908.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12271 659..2279 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12271.1908.1 ID=prot_Ecto-sp13_S_contig12271.1908.1|Name=mRNA_Ecto-sp13_S_contig12271.1908.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=155bp
LYRLVHRQKQTVDDDEVLEESEFTPRRLFLRDTLARGITPSPTMMRSRKD
PHTLDLGFQGLGDQIGLSLATTLPLLPNLASLNLRENRLTDASLDNILAE
AVRLECLTSLDLSCNKIDHSALVLREYVASARCKLQRLSLSNADVDDDEC
NSLME
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf