mRNA_Ecto-sp13_S_contig7802.19056.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7802.19056.1 vs. uniprot
Match: D7FT36_ECTSI (Aspartyl protease family A01A, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT36_ECTSI) HSP 1 Score: 499 bits (1285), Expect = 1.800e-176 Identity = 256/281 (91.10%), Postives = 264/281 (93.95%), Query Frame = 1
Query: 1 LGVMCLQFEREDILQVYISGGRPLFVLNEAQKEEVIAQADSHLKTAKGRGYRRQVTRGEVVDLLSTLPRDASGLVSFHDAQKLIMGYREKQIARFKVIFPEIAGGAARKQAGRASKSCTHGNIGGNEQTQDGEVGRGCDGDRSCALAETTVVGRAQAGNAFASTENMSRGCSGCGGAKRRGGRAKFSADVAPAEMFVKDMGYTPAGVANHTSKLLSTCAYKVSNIADSNDPGLTQNVKLIRDDRQPEQGQGTWDPYACLRGYNIGGHVRSARSSTTAKRKA 843
+ MCLQFEREDILQVYISGGRPLFVLN+AQKEEVIAQADSHLKTAKGRGYRRQVTRGEVVDLLSTLPR ASGLVSFHDAQKLIMGYREKQIARFKVIFPEIAGGAA KQAGRASKSC HGNIGG +T DG+VGRG GDRSCALAETTVVGRAQAG ASTENMS GCSG GGAKR+GGRAKFSA+VAPAEMFVKDMG+TPAG+ANHTSKLLST AYKVSNIAD NDPGLTQNVKLIRDDRQPEQGQGTWDPYACLRGYNIGGHVRSARSSTTAKRKA
Sbjct: 70 IDTMCLQFEREDILQVYISGGRPLFVLNDAQKEEVIAQADSHLKTAKGRGYRRQVTRGEVVDLLSTLPRYASGLVSFHDAQKLIMGYREKQIARFKVIFPEIAGGAASKQAGRASKSCAHGNIGGGGKTLDGDVGRGGGGDRSCALAETTVVGRAQAGKVLASTENMSTGCSGGGGAKRKGGRAKFSAEVAPAEMFVKDMGHTPAGIANHTSKLLSTRAYKVSNIADGNDPGLTQNVKLIRDDRQPEQGQGTWDPYACLRGYNIGGHVRSARSSTTAKRKA 350
BLAST of mRNA_Ecto-sp13_S_contig7802.19056.1 vs. uniprot
Match: A0A7S3Y154_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y154_HETAK) HSP 1 Score: 161 bits (408), Expect = 8.440e-44 Identity = 107/280 (38.21%), Postives = 150/280 (53.57%), Query Frame = 1
Query: 1 LGVMCLQFEREDILQVYISGGRPLFVLNEAQKEEVIAQADSHLKTAKGRGYRRQVTRGEVVDLLSTLPRDASGLVSFHDAQKLIMGYREKQIARFKVIFPEIAGGAARKQAGRASKSCTHGNIGGNEQTQDGEVGRGCDGDRSCALAETTVVGRAQAGNAFASTENMSRGCSGCGGAKRRGGRAKFSADVAPAEMFVKDMGYTPAGVANHTSKLLSTCAYKVSNIADSNDPGLTQNVKLIRDDRQPEQGQGTWDPYACLRGYNIGGHVRSARSSTTAKRK 840
L MC +FERE ILQVY+ G +L+E++ E VIAQAD K AKG+ QV+R E L + LPRDA G +SFHD Q+ I+ YRE++IA KVIFPE+ G + V + G+ + M G AK++G S VAP EMF K G+T +++ ++LLS A+++++I N LTQNV+L+R+ R+P+ G+ WD +CLRG NIGGHV++A+S+TT KRK
Sbjct: 95 LDAMCQRFEREIILQVYL-GSDSFELLSESEVEAVIAQADRRTKVAKGKAGMPQVSREEAAALFADLPRDADGRLSFHDMQRKIVEYREQKIAELKVIFPELMGXXXXXXXXXXXXXXXX-----------XXXXXXXXXXXXXDPQQAAVSDAGEPGSXXXXFKLMDAGRQAPVSAKKKG----LSRRVAPPEMFQKGTGFTEMEMSSQVNQLLSKHAFRITDIEHGNASELTQNVQLLREIREPDDGR-KWDSNSCLRGSNIGGHVKTAKSATTVKRK 357
BLAST of mRNA_Ecto-sp13_S_contig7802.19056.1 vs. uniprot
Match: A0A7S2B712_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B712_9STRA) HSP 1 Score: 146 bits (369), Expect = 1.140e-38 Identity = 110/285 (38.60%), Postives = 143/285 (50.18%), Query Frame = 1
Query: 1 LGVMCLQFEREDILQVYISGGRPLFVLNEAQKEEVIAQADSHLKTAKGRGYRRQVTRGEVVDLLSTL-PRDASGLVSFHDAQKLIMGYREKQIARFKVIFPEIAGGAARKQAGRASKSCTHGNIGGNEQTQDGEVGRGCDGDRSCALAETTVVGRAQAGNAFASTENMSRGCSGCGGAKRRGGRAKFSADVAPAEMFVKDMGYTPAGVANHTSKLLSTCAYKVSNIADSNDPGLTQNVKLIR----DDRQPEQGQGTWDPYACLRGYNIGGHVRSARSSTTAKRK 840
L MC QFEREDILQ+Y+ G+ L E Q EE++AQADS LK AKG+ +QVT EV + S L P A+GL+ FHD Q+ I+ YR+ I K +FPE+ A K+ G G E T G +G A GR ST +RG + A VAPA MF++D G VA+ T+KLL A+ + NIAD N LT NV+L+R D +G+ TWD RG +G V++ +SSTT KRK
Sbjct: 52 LDTMCRQFEREDILQIYMLPGQTHSNLTEDQAEEILAQADSRLKVAKGKAMMKQVTPEEVDMIFSDLEPDPATGLLQFHDCQQRIIEYRQYCIKLNKEVFPEVTSKA--KRIGSLKS--------GPEFTPIGPLG---------ATYNEFGPGR--------STGRRTRG-------------VRVGASVAPATMFLRDKGLNSMEVASSTNKLLCHKAFSLCNIADGNSSELTANVRLVRSEPKDSAYTPEGRSTWDRNHATRGQLMGAFVKAPKSSTTVKRK 296
BLAST of mRNA_Ecto-sp13_S_contig7802.19056.1 vs. uniprot
Match: A0A835ZGK5_9STRA (Putative aspartyl protease family A01A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGK5_9STRA) HSP 1 Score: 119 bits (299), Expect = 2.790e-28 Identity = 89/280 (31.79%), Postives = 124/280 (44.29%), Query Frame = 1
Query: 1 LGVMCLQFEREDILQVYISGGRPLFVLNEAQKEEVIAQADSHLKTAKGRGYRRQVTRGEVVDLLSTLPRDASGLVSFHDAQKLIMGYREKQIARFKVIFPEIAGGAARKQAGRASKSCTHGNIGGNEQTQDGEVGRGCDGDRSCALAETTVVGRAQAGNAFASTENMSRGCSGCGGAKRRGGRAKFSADVAPAEMFVKDMGYTPAGVANHT--------------------SKLLSTCAYKVSNIADSNDPGLTQNVKLIRDD--RQPEQGQGTWDPYAC 774
L MC +RED+LQVY+S RPL L AQ+EE+IAQ+ Q+TR +V+ L +PR SFHD QK+++ YR++++A K+++P +A H ++ Q E G R ++ RG + KFS DVAPA MF+KD G +A +KLLST A+K+S+I D N+P LT NV+LIR+D QP QG WD C
Sbjct: 80 LDSMCTTIDREDVLQVYVSDDRPLCELLAAQQEEIIAQSTVTFP---------QITREQVIALFEGVPRGTDNAFSFHDVQKVVVAYRDRRVADGKIMYPSLA---------------AHSKSPPRKRAQSTEKGTATAAQRQSPIS--------------------------------RGHKFKFSPDVAPATMFLKDKGLGDMEMATQRPLHSIQTINEVLLLTCMVQINKLLSTKAFKISSIEDGNNPSLTGNVRLIREDTTHQP-QGGAQWDETCC 302
BLAST of mRNA_Ecto-sp13_S_contig7802.19056.1 vs. uniprot
Match: A0A7S2RFT5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RFT5_9STRA) HSP 1 Score: 100 bits (248), Expect = 4.720e-22 Identity = 53/111 (47.75%), Postives = 70/111 (63.06%), Query Frame = 1
Query: 1 LGVMCLQFEREDILQVYISGGRPLFVLNEAQKEEVIAQADSHLKTAKGRGYRRQVTRGEVVDLLSTLPRDASGLVSFHDAQKLIMGYREKQIARFKVIFPEIAGGAARKQA 333
L MC QFEREDILQVY+ G+ L E + E++AQAD+ +K AKG+ +QVT EV +L + L RD GL++FHD Q+ IM +RE I KVIFP + G + A
Sbjct: 36 LDTMCRQFEREDILQVYMQKGQSPSALAEEEALELLAQADTRMKVAKGKALMKQVTEEEVRELFADLHRDEDGLLTFHDMQQRIMQFRENAIKSNKVIFPHLTPGVGKPGA 146
BLAST of mRNA_Ecto-sp13_S_contig7802.19056.1 vs. uniprot
Match: A0A6G0WC23_9STRA (NDK domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WC23_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 2.120e-8 Identity = 39/96 (40.62%), Postives = 56/96 (58.33%), Query Frame = 1
Query: 1 LGVMCLQFEREDILQVYISGGRPLFVLNEAQKEEVIAQADSHLKTAKGRGYRRQVTRGEVVDLLSTLPRDASGLVSFHDAQKLIMGYREKQIARFK 288
L MCL EREDIL VY G L+ A++E+V+ QAD ++K + TR ++ L T+PR+A+GL+SFHD Q+ I R ++I K
Sbjct: 277 LDTMCLSMEREDILSVYGMIG-----LSRAEEEQVLGQADQNMKDVP------RYTRADIQQLFRTVPRNANGLMSFHDMQEKITKERLRRIVCMK 361
BLAST of mRNA_Ecto-sp13_S_contig7802.19056.1 vs. uniprot
Match: A0A482RSK8_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RSK8_9ARCH) HSP 1 Score: 57.0 bits (136), Expect = 3.820e-7 Identity = 26/64 (40.62%), Postives = 44/64 (68.75%), Query Frame = 1
Query: 1 LGVMCLQFEREDILQVYISGGRPLFVLNEAQKEEVIAQADSHLKTAKGRGYRRQVTRGEVVDLL 192
L VMC+Q EREDI+Q+Y+ R + +L A+++ +I QAD+HLK KG+ ++++ +V +L
Sbjct: 16 LEVMCIQIEREDIVQIYLHKARDMGMLTTAEQDMMINQADAHLKREKGKAMLPRISKDDVRQIL 79
BLAST of mRNA_Ecto-sp13_S_contig7802.19056.1 vs. uniprot
Match: A0A2D4BUB7_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BUB7_PYTIN) HSP 1 Score: 59.3 bits (142), Expect = 5.350e-7 Identity = 32/72 (44.44%), Postives = 47/72 (65.28%), Query Frame = 1
Query: 565 DVAPAEMFVKDMGYTPAGVANHTSKLLSTCAYKVSNIADSNDPGLTQNVKLIRDDRQPEQGQGT-----WDP 765
+VAPA MFV+D+G+T A A ++LLS A+++ ++ D N P LTQNV+L+R QP Q G+ W+P
Sbjct: 110 EVAPASMFVRDLGFTGAENATLVARLLSNHAFQICHLDDGNAPALTQNVRLLR---QPVQLPGSETRAPWNP 178
BLAST of mRNA_Ecto-sp13_S_contig7802.19056.1 vs. uniprot
Match: A0A1V9ZJQ7_9STRA (Aspartyl protease family A01A n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZJQ7_9STRA) HSP 1 Score: 57.8 bits (138), Expect = 7.560e-6 Identity = 38/96 (39.58%), Postives = 51/96 (53.12%), Query Frame = 1
Query: 1 LGVMCLQFEREDILQVYISGGRPLFVLNEAQKEEVIAQADSHLKTAKGRGYRRQVTRGEVVDLLSTLPRDASGLVSFHDAQKLIMGYREKQIARFK 288
L M EREDIL VY G L+ ++EEV+ QAD HLKT + TR +V ++ +PRD G ++FH QK IM R ++I K
Sbjct: 274 LNTMSQSIEREDILSVYGMVG-----LSRDEEEEVLRQADKHLKTIP------RYTRRDVDEIFRHVPRDGRGDIAFHHMQKRIMEERLRRIVCMK 358
BLAST of mRNA_Ecto-sp13_S_contig7802.19056.1 vs. uniprot
Match: A0A067D140_SAPPC (NDK domain-containing protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067D140_SAPPC) HSP 1 Score: 57.0 bits (136), Expect = 1.360e-5 Identity = 36/96 (37.50%), Postives = 51/96 (53.12%), Query Frame = 1
Query: 1 LGVMCLQFEREDILQVYISGGRPLFVLNEAQKEEVIAQADSHLKTAKGRGYRRQVTRGEVVDLLSTLPRDASGLVSFHDAQKLIMGYREKQIARFK 288
L M EREDIL VY G L+ ++EEV+ QAD HLK + TR ++ + +PRDA G +SFHD Q+ I+ R +++ K
Sbjct: 273 LNTMSQSIEREDILSVYGMVG-----LSRDEEEEVLRQADKHLKMIP------RYTRADIEAMFKHVPRDAVGAMSFHDMQQRILQERLRRVLCMK 357 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7802.19056.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7802.19056.1 >prot_Ecto-sp13_S_contig7802.19056.1 ID=prot_Ecto-sp13_S_contig7802.19056.1|Name=mRNA_Ecto-sp13_S_contig7802.19056.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=279bp MCLQFEREDILQVYISGGRPLFVLNEAQKEEVIAQADSHLKTAKGRGYRRback to top mRNA from alignment at Ecto-sp13_S_contig7802:5351..7122- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7802.19056.1 ID=mRNA_Ecto-sp13_S_contig7802.19056.1|Name=mRNA_Ecto-sp13_S_contig7802.19056.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1772bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7802:5351..7122- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7802:5351..7122- >mRNA_Ecto-sp13_S_contig7802.19056.1 ID=mRNA_Ecto-sp13_S_contig7802.19056.1|Name=mRNA_Ecto-sp13_S_contig7802.19056.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=837bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7802:5351..7122- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |