mRNA_Ecto-sp13_S_contig780.19054.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig780.19054.1 vs. uniprot
Match: A0A6H5KUS9_9PHAE (Ubiquitin-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KUS9_9PHAE) HSP 1 Score: 920 bits (2379), Expect = 0.000e+0 Identity = 575/695 (82.73%), Postives = 585/695 (84.17%), Query Frame = 3
Query: 3 PVDPELHDYIMSFEPEATAERLGNTLNLQEPCLRNLRIAETLLQEGVKAGLTLYDIACIIRREDFDKASELETLIARATELARAAVDHQTSVAPSKRLADLTSKSLDATKTTPAAARSRPGSLPVQRSVGSADWAASEDKDDWFLSAGGPEGVPATAPSLATESSTDASSEEYLTSAPELRGAGKSVDGGGGRAEGARGEGLRIWAPGARALSRDVSTGGGGDGDSTSPAKSAESDADPISPAGFWREKFETIDARNATRRFSHWEDSTPGNEASPGESVAGSGGASSRGERAGGGRPPLRKDGGEPVAASSEDESANPGEPVGTDAEVGRKLFSSYEKPXXXXXXXXXXXXXXXXXXXKNMLLSSSGNSLEPMVEVDQEVPSPAGPTGEAGGDPPPPLWATTAAVERT-----------------------------REAVAGVGSSGSAPPAEEKNGNMAGPGLGWRRGEAGLVIPEPMPQQKPRPVVQSVVPHRVSRVGGDGSGGDGSDPKRPLAAPRPATASPTLPPAGGEHKSKSPQELQQALTPGVKIVRSYSYHGLGSMALYDAAKRGSARYSIRRRPSENSKQFKLCFFRFFDFLVCDLVKRRHRTIVKERAXXXXXXXXXXXXXXXXXXXXXXXXXAYSTMRGRGASFERLKTQHTPXXXXXXXXXXRGGSNSGSPHAGMPAAVRG 2000
PVD EL+DYIMSFEPEATAERLGNTLNLQEPCLRNLRIAETLLQEGVKAGLTLYDIACIIRREDFDK SELETLIARATELARAAVDHQTSVAPSKRLADLTSKSLD KTTPAAARSRPGSLP QRSVGSADWAASEDKDDWFLSAGGPEGVPATAPSLATESSTDASSEEYLTSAPELRGAGKSVDGGGGRAEGARGEGLRIWAPGAR LSRD+STGGGGD DS SPAKSAESDADPISPAGFWREKFETIDARNATRRFSHWED TPG EASPGESVAGSGGASSRGERAGGGRPPLRKDGG+P AASSEDESA+PGEPVGTDA+V +KLFSS XXXXXXXXXXXX KNML+SS+GNSLEPMVEVDQEVPSPAGPTG A R A A VG E G+GWRRGEAGLVIPEPM QQKPRPV+ SVVPHRVSRVGGDG DGSDPKRPLAAPRPATASP LPPA GEHKSKSPQELQQALTPGVKIVRSYSYHGLGSMALYDAAKRG RRPSENSKQFKLCFFRFFDFLVCDLVKRR RTIVKER XXXXXXXXXXXXXXXXXXXXXXXXX STMRGRGASFERLKTQHTPXXXXXXXXX RGGSNSGSPHAGMPAAVRG
Sbjct: 412 PVDAELYDYIMSFEPEATAERLGNTLNLQEPCLRNLRIAETLLQEGVKAGLTLYDIACIIRREDFDKVSELETLIARATELARAAVDHQTSVAPSKRLADLTSKSLDFAKTTPAAARSRPGSLPAQRSVGSADWAASEDKDDWFLSAGGPEGVPATAPSLATESSTDASSEEYLTSAPELRGAGKSVDGGGGRAEGARGEGLRIWAPGARTLSRDMSTGGGGDVDSASPAKSAESDADPISPAGFWREKFETIDARNATRRFSHWEDGTPGGEASPGESVAGSGGASSRGERAGGGRPPLRKDGGDPGAASSEDESADPGEPVGTDAKVEQKLFSSXXXXXXXXXXXXXXXXLAAERCMKNMLMSSAGNSLEPMVEVDQEVPSPAGPTGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPAPAPVGHHRRCRAYEGGCRRHGLIGVGWRRGEAGLVIPEPMLQQKPRPVMPSVVPHRVSRVGGDGGXXDGSDPKRPLAAPRPATASPMLPPASGEHKSKSPQELQQALTPGVKIVRSYSYHGLGSMALYDAAKRG-------RRPSENSKQFKLCFFRFFDFLVCDLVKRRQRTIVKERXXXXXXXXXXXXXXXXXXXXXXXXXXN-STMRGRGASFERLKTQHTPXXXXXXXXX-RGGSNSGSPHAGMPAAVRG 1097
BLAST of mRNA_Ecto-sp13_S_contig780.19054.1 vs. uniprot
Match: A0A835Z5L8_9STRA (Phosphatidylinositol 3 and 4-kinase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5L8_9STRA) HSP 1 Score: 102 bits (254), Expect = 2.250e-18 Identity = 50/88 (56.82%), Postives = 66/88 (75.00%), Query Frame = 3
Query: 3 PVDPELHDYIMSFEPEATAERLGNTLNLQEPCLRNLRIAETLLQEGVKAGLTLYDIACIIRREDFDKASELETLIARATELARAAVDH 266
P+D E Y++S +P+ AERLG L+L+ PCLRN R+A TLL+ GV AGLTL+D+A I+ R D D+ SELE ++ RA ELARAAVD+
Sbjct: 314 PLDKETLQYVLSLDPQGDAERLGRKLSLRAPCLRNFRVAGTLLKAGVAAGLTLHDVATIVVRHDLDERSELERIMRRARELARAAVDN 401
BLAST of mRNA_Ecto-sp13_S_contig780.19054.1 vs. uniprot
Match: A0A7S1TYN4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TYN4_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 5.260e-12 Identity = 43/89 (48.31%), Postives = 56/89 (62.92%), Query Frame = 3
Query: 3 PVDPELHDYIMSFEPEATAERLGNTLNLQEPCLRNLRIAETLLQEGVKAGLTLYDIACIIRREDFDKASELETLIARATELARAAVDHQ 269
P+ E +I+ +P A RLG L ++E LRN+ A LL+EGVKAGLTLYDIA I+ R+D D SELE ++ A EL+ AV Q
Sbjct: 110 PLSEEDRAFILGLDPFEEARRLGQVLPIRESALRNMTAAHILLREGVKAGLTLYDIANIVARQDLDTPSELEHILELAEELSGTAVRQQ 198
BLAST of mRNA_Ecto-sp13_S_contig780.19054.1 vs. uniprot
Match: A0A7S3Q326_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q326_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 9.800e-8 Identity = 37/90 (41.11%), Postives = 58/90 (64.44%), Query Frame = 3
Query: 3 PVDPELHDYIMSFEPEATAERLGNTLNLQEPCLRNLRIAETLLQEGVKAGLTLYDIACIIRREDF--DKASELETLIARATELARAAVDH 266
PV + YI++ + EA A L L++ E L R + LLQEG+K+G+TLYD+A + R D ++ S+LETLIA A ++A++A+D+
Sbjct: 429 PVSEKTKKYILNLDIEADARMLKERLSIPERALDYFRASSKLLQEGIKSGMTLYDVAILCCRNDNAGERQSKLETLIAMADDIAKSALDN 518
BLAST of mRNA_Ecto-sp13_S_contig780.19054.1 vs. uniprot
Match: A0A8K1C962_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C962_PYTOL) HSP 1 Score: 64.7 bits (156), Expect = 7.270e-7 Identity = 33/74 (44.59%), Postives = 44/74 (59.46%), Query Frame = 3
Query: 3 PVDPELHDYIMSFEPEATAERLGNTLNLQEPCLRNLRIAETLLQEGVKAGLTLYDIACIIRREDFDKASELETL 224
P+ E Y++ P ERL + L+ C RN+ IA TL+Q+GVKA L LYDIA I+ R+D D S LE +
Sbjct: 387 PLSAEDRAYVLELNPVEDTERLSRKIPLRRACRRNMIIAGTLVQKGVKANLVLYDIAKIMCRDDLDTPSTLERM 460
BLAST of mRNA_Ecto-sp13_S_contig780.19054.1 vs. uniprot
Match: M4BF18_HYAAE (Ubiquitin-like domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BF18_HYAAE) HSP 1 Score: 62.0 bits (149), Expect = 4.880e-6 Identity = 32/78 (41.03%), Postives = 47/78 (60.26%), Query Frame = 3
Query: 3 PVDPELHDYIMSFEPEATAERLGNTLNLQEPCLRNLRIAETLLQEGVKAGLTLYDIACIIRREDFDKASELETLIARA 236
P+ E Y++S + A+RL + L+ C RN+ IA ++Q+GV+A LTLY+IA + RED D S LE L +A
Sbjct: 327 PLSVEDRAYVLSLSAQEDADRLAKRIPLRRACRRNMIIAGMVVQQGVRADLTLYEIARTMCREDLDAPSTLEQLCTKA 404
BLAST of mRNA_Ecto-sp13_S_contig780.19054.1 vs. uniprot
Match: A0A6U5NS36_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A6U5NS36_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 2.710e-5 Identity = 36/90 (40.00%), Postives = 52/90 (57.78%), Query Frame = 3
Query: 3 PVDPELHDYIMSFEPEATAERLGNTLNLQEPCLRNLRIAETLLQEGVKAGLTLYDIACIIRREDF--DKASELETLIARATELARAAVDH 266
P+ Y+++ + + A L LN+ E L R + LLQEGVKAGL+LY+IA + R D + S+LE L A A ELA +AV++
Sbjct: 360 PLSKRSRKYVLNLDIDKDARMLKERLNISEEALGYFRASSKLLQEGVKAGLSLYEIASMCCRNDNMGEHPSKLEQLTAMAQELATSAVEN 449
BLAST of mRNA_Ecto-sp13_S_contig780.19054.1 vs. uniprot
Match: A0A7R9WD71_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WD71_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 2.810e-5 Identity = 35/90 (38.89%), Postives = 53/90 (58.89%), Query Frame = 3
Query: 3 PVDPELHDYIMSFEPEATAERLGNTLNLQEPCLRNLRIAETLLQEGVKAGLTLYDIACIIRREDF--DKASELETLIARATELARAAVDH 266
P+ + +YI+ + +A L L+++ L R + TLL+ GVKAGLTLYDIA + R D + S LE L++ ATEL AA+++
Sbjct: 381 PLSEKTKEYILRLDIDADVRVLKERLHIRNEALDYFRASSTLLKAGVKAGLTLYDIAVMCCRNDDAGEVPSRLEVLMSMATELTNAAIEN 470
BLAST of mRNA_Ecto-sp13_S_contig780.19054.1 vs. uniprot
Match: A0A6S9IYI4_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9IYI4_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 4.750e-5 Identity = 38/90 (42.22%), Postives = 48/90 (53.33%), Query Frame = 3
Query: 3 PVDPELHDYIMSFEPEATAERLGNTLNLQEPCLRNLRIAETLLQEGVKAGLTLYDIACIIRREDF--DKASELETLIARATELARAAVDH 266
P+ E DY++ + EA L LN+ L R + LLQ GVKAGLTLYDIA + R D + S+LE L ATEL AV +
Sbjct: 370 PLSQESKDYVLKLDIEADCRMLQERLNIGTEALDYFRSSSKLLQAGVKAGLTLYDIAVMCCRNDDAGELPSKLEVLSNMATELGSLAVQN 459
BLAST of mRNA_Ecto-sp13_S_contig780.19054.1 vs. uniprot
Match: A0A7S2LAJ7_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LAJ7_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 6.260e-5 Identity = 37/90 (41.11%), Postives = 50/90 (55.56%), Query Frame = 3
Query: 3 PVDPELHDYIMSFEPEATAERLGNTLNLQEPCLRNLRIAETLLQEGVKAGLTLYDIACIIRREDF--DKASELETLIARATELARAAVDH 266
P+ + DYI E A L L++ L +R + LLQEGVKAGL LY+IA + R D D +S LE L A A E+A +AV++
Sbjct: 397 PISQKTKDYIFKLNVEEEARLLKERLHIGTEALDIMRASTKLLQEGVKAGLNLYEIALLCCRFDDAGDVSSRLEVLTAMAAEIATSAVEN 486 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig780.19054.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig780.19054.1 >prot_Ecto-sp13_S_contig780.19054.1 ID=prot_Ecto-sp13_S_contig780.19054.1|Name=mRNA_Ecto-sp13_S_contig780.19054.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=657bp MSFEPEATAERLGNTLNLQEPCLRNLRIAETLLQEGVKAGLTLYDIACIIback to top mRNA from alignment at Ecto-sp13_S_contig780:17473..21526- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig780.19054.1 ID=mRNA_Ecto-sp13_S_contig780.19054.1|Name=mRNA_Ecto-sp13_S_contig780.19054.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4054bp|location=Sequence derived from alignment at Ecto-sp13_S_contig780:17473..21526- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig780:17473..21526- >mRNA_Ecto-sp13_S_contig780.19054.1 ID=mRNA_Ecto-sp13_S_contig780.19054.1|Name=mRNA_Ecto-sp13_S_contig780.19054.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1971bp|location=Sequence derived from alignment at Ecto-sp13_S_contig780:17473..21526- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |