prot_Ecto-sp13_S_contig77791.19025.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig77791.19025.1
Unique Nameprot_Ecto-sp13_S_contig77791.19025.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length42
Homology
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BLAST of mRNA_Ecto-sp13_S_contig77791.19025.1 vs. uniprot
Match: D7G610_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G610_ECTSI)

HSP 1 Score: 67.0 bits (162), Expect = 7.290e-12
Identity = 28/40 (70.00%), Postives = 34/40 (85.00%), Query Frame = 0 
Query:    1 VYGLPLDRTGAYTVYRQWKNTPAQRAEMLMYNLTTAFELC 40
            VYGL LDR+G+Y+VYR W+NTP QRAEML YN+TT F+ C
Sbjct:  365 VYGLQLDRSGSYSVYRHWENTPEQRAEMLGYNVTTTFQRC 404
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig77791.19025.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G610_ECTSI7.290e-1270.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig77791contigEcto-sp13_S_contig77791:371..496 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig77791.19025.1mRNA_Ecto-sp13_S_contig77791.19025.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig77791 371..633 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig77791.19025.1 ID=prot_Ecto-sp13_S_contig77791.19025.1|Name=mRNA_Ecto-sp13_S_contig77791.19025.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=42bp
VYGLPLDRTGAYTVYRQWKNTPAQRAEMLMYNLTTAFELCT*
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