prot_Ecto-sp13_S_contig7763.19008.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7763.19008.1
Unique Nameprot_Ecto-sp13_S_contig7763.19008.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length237
Homology
BLAST of mRNA_Ecto-sp13_S_contig7763.19008.1 vs. uniprot
Match: D8LHY4_ECTSI (Geranyl-diphosphate synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHY4_ECTSI)

HSP 1 Score: 274 bits (700), Expect = 2.550e-86
Identity = 164/229 (71.62%), Postives = 168/229 (73.36%), Query Frame = 0
Query:    8 RISGSSSAAAAATLARHANACCRAGSPALGLLPGAVASSSTHRAALSSDSSHGGDGSGHYDGAMRRRESCASRSRHRWSGQGAAAALGTTTTARRAPGGVAGASGQGPAAGSVRALSSSFLADAVRETATNHCIDRVVNGGLDGTVPVDKDSPTVEVQDFVYDIDFAQRPSGASQSLADGPDPFELVSGELAGLSDGIKSLIGTEHAVLNAAAKYFFELDGGKKIRPTM 236
            R SGS++AAAAATLARHANACCRA SPALGLLPGA                                         RWS                APGGVAGASGQG AAGSVRALSSSFLADAVRETATNHCIDRVVNGGLDG+VPVDKD+PTVEVQDFVYDIDFAQRPSGASQSLADGPDPFELVS ELAGLSDGIKSLIGTEHAVLNAAAKYFFELDGGKKIRPTM
Sbjct:    2 RRSGSATAAAAATLARHANACCRARSPALGLLPGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRWSXXXXXXXXXXXXXXXXAPGGVAGASGQGSAAGSVRALSSSFLADAVRETATNHCIDRVVNGGLDGSVPVDKDTPTVEVQDFVYDIDFAQRPSGASQSLADGPDPFELVSAELAGLSDGIKSLIGTEHAVLNAAAKYFFELDGGKKIRPTM 230          
BLAST of mRNA_Ecto-sp13_S_contig7763.19008.1 vs. uniprot
Match: A0A836CLR5_9STRA (Geranyl-diphosphate synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLR5_9STRA)

HSP 1 Score: 107 bits (267), Expect = 2.090e-23
Identity = 63/129 (48.84%), Postives = 85/129 (65.89%), Query Frame = 0
Query:  115 PAAGSVRALSSSFLADAVR----ETATNHCIDRVVNGGLDGTVPVDKDSPTVE-VQDFVYDIDFAQRPSGASQSLADG--PDPFELVSGELAGLSDGIKSLIGTEHAVLNAAAKYFFELDGGKKIRPTM 236
            PAAG+ R  SSSFLADAVR    E  T+  I+ ++NG       +  D PT++   DFVYDID  ++PSG   +  +   PDPF LV+ ++  LSDG K L+GT+H VL +AA+YFF++DGGKK+RP M
Sbjct:   39 PAAGACR--SSSFLADAVRDSVKEALTSRSINHIINGEASKPASL-VDVPTLQSCDDFVYDIDLERQPSGKFAAALEARLPDPFRLVASDMKTLSDGCKELLGTDHPVLQSAAQYFFDVDGGKKVRPVM 164          
BLAST of mRNA_Ecto-sp13_S_contig7763.19008.1 vs. uniprot
Match: A0A7S2B533_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B533_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 6.930e-16
Identity = 46/92 (50.00%), Postives = 59/92 (64.13%), Query Frame = 0
Query:  158 DSPTVEVQD------FVYDIDFAQRPSG-------ASQSLADGPDPFELVSGELAGLSDGIKSLIGTEHAVLNAAAKYFFELDGGKKIRPTM 236
            D+PTV V D      F + +D  Q P+        A    +  PDPF+LV+GE+  LSDGI+SL+G++H VL   A+YFFELDGGKKIRPTM
Sbjct:   56 DTPTVLVADPLHPGGFDFSVDLHQPPATDAGVAAFARDRASSAPDPFDLVAGEIDSLSDGIRSLLGSDHPVLEVCARYFFELDGGKKIRPTM 147          
BLAST of mRNA_Ecto-sp13_S_contig7763.19008.1 vs. uniprot
Match: A0A7S1U6T1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U6T1_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 2.370e-14
Identity = 50/117 (42.74%), Postives = 71/117 (60.68%), Query Frame = 0
Query:  127 FLADAVRETATNHCIDRVV--NGGLDGTVPVDKDSPTVEVQDFVYDIDFAQR--PSG---ASQSLADGPDPFELVSGELAGLSDGIKSLIGTEHAVLNAAAKYFFELDGGKKIRPTM 236
            ++A  V +++ +  ID +   +   +  + VDK  PTVE  D   ++  + R  P+G   A+ +     DPF LVSG +  L DGIK L+G++H VL A A+YFFELDGGKKIRPTM
Sbjct:   39 YVAKQVAKSSLDKAIDALQRESDAFEDVLGVDK--PTVEGTDGGIELKSSLRREPNGLLTATAAATRDADPFALVSGHITSLGDGIKHLLGSDHPVLQACAQYFFELDGGKKIRPTM 153          
BLAST of mRNA_Ecto-sp13_S_contig7763.19008.1 vs. uniprot
Match: A0A7S1U4D1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U4D1_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 7.270e-14
Identity = 50/117 (42.74%), Postives = 71/117 (60.68%), Query Frame = 0
Query:  127 FLADAVRETATNHCIDRVV--NGGLDGTVPVDKDSPTVEVQDFVYDIDFAQR--PSG---ASQSLADGPDPFELVSGELAGLSDGIKSLIGTEHAVLNAAAKYFFELDGGKKIRPTM 236
            ++A  V +++ +  ID +   +   +  + VDK  PTVE  D   ++  + R  P+G   A+ +     DPF LVSG +  L DGIK L+G++H VL A A+YFFELDGGKKIRPTM
Sbjct:   39 YVAKQVAKSSLDKAIDALQRESDAFEDVLGVDK--PTVEGTDGGIELKSSLRREPNGLLTATAAATRDADPFALVSGHITSLGDGIKHLLGSDHPVLQACAQYFFELDGGKKIRPTM 153          
BLAST of mRNA_Ecto-sp13_S_contig7763.19008.1 vs. uniprot
Match: W7TXB8_9STRA (Decaprenyl-diphosphate synthase subunit 1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TXB8_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 4.070e-12
Identity = 35/52 (67.31%), Postives = 42/52 (80.77%), Query Frame = 0
Query:  185 ADGPDPFELVSGELAGLSDGIKSLIGTEHAVLNAAAKYFFELDGGKKIRPTM 236
            A G DPF++V  ++  LS GIKSL+G++H VL A AKYFFELDGGKKIRPTM
Sbjct:  138 ARGVDPFKIVESDMRSLSAGIKSLLGSDHPVLEACAKYFFELDGGKKIRPTM 189          
BLAST of mRNA_Ecto-sp13_S_contig7763.19008.1 vs. uniprot
Match: A0A7S3M8T3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M8T3_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 1.380e-10
Identity = 30/48 (62.50%), Postives = 39/48 (81.25%), Query Frame = 0
Query:  189 DPFELVSGELAGLSDGIKSLIGTEHAVLNAAAKYFFELDGGKKIRPTM 236
            DPF+LV  +++ LS GIK L+G++H VL + AKYFFE DGGKKIRP+M
Sbjct:  124 DPFDLVEKDVSTLSGGIKDLLGSDHPVLESCAKYFFETDGGKKIRPSM 171          
BLAST of mRNA_Ecto-sp13_S_contig7763.19008.1 vs. uniprot
Match: A0A7S0SWQ7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SWQ7_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 1.390e-10
Identity = 31/48 (64.58%), Postives = 39/48 (81.25%), Query Frame = 0
Query:  189 DPFELVSGELAGLSDGIKSLIGTEHAVLNAAAKYFFELDGGKKIRPTM 236
            DPF+LV  +L+ +S GIK L+G++H VL + AKYFFELDGGKKIRP M
Sbjct:   93 DPFKLVEKDLSNISSGIKDLLGSDHPVLESCAKYFFELDGGKKIRPAM 140          
BLAST of mRNA_Ecto-sp13_S_contig7763.19008.1 vs. uniprot
Match: A0A225VZT6_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VZT6_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 2.180e-10
Identity = 39/82 (47.56%), Postives = 52/82 (63.41%), Query Frame = 0
Query:  155 VDKDSPTVEVQDFVYDIDFAQRPSGASQSLADGPDPFELVSGELAGLSDGIKSLIGTEHAVLNAAAKYFFELDGGKKIRPTM 236
            VD D P  +V     D+  A  P+  SQ LA   DPF LV  ++ G++  IK ++G++H VL A A+YFFE DGGKK+RPTM
Sbjct:   68 VDFDKPMSDV-----DVPLAYLPTDPSQ-LA---DPFTLVEQDMVGVTTSIKHILGSDHPVLAAVARYFFEHDGGKKVRPTM 140          
BLAST of mRNA_Ecto-sp13_S_contig7763.19008.1 vs. uniprot
Match: A0A1V9Z381_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z381_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 6.590e-10
Identity = 29/48 (60.42%), Postives = 39/48 (81.25%), Query Frame = 0
Query:  189 DPFELVSGELAGLSDGIKSLIGTEHAVLNAAAKYFFELDGGKKIRPTM 236
            DPFEL+  ++  +S+ IK+++G++H VL A AKYFFE DGGKKIRPTM
Sbjct:   97 DPFELIKDKIVSVSESIKTILGSDHPVLEAVAKYFFENDGGKKIRPTM 144          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7763.19008.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHY4_ECTSI2.550e-8671.62Geranyl-diphosphate synthase n=2 Tax=Ectocarpus Ta... [more]
A0A836CLR5_9STRA2.090e-2348.84Geranyl-diphosphate synthase n=1 Tax=Tribonema min... [more]
A0A7S2B533_9STRA6.930e-1650.00Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1U6T1_9STRA2.370e-1442.74Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S1U4D1_9STRA7.270e-1442.74Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
W7TXB8_9STRA4.070e-1267.31Decaprenyl-diphosphate synthase subunit 1 n=1 Tax=... [more]
A0A7S3M8T3_9STRA1.380e-1062.50Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7S0SWQ7_9STRA1.390e-1064.58Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
A0A225VZT6_9STRA2.180e-1047.56Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
A0A1V9Z381_9STRA6.590e-1060.42Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..10
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..237

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7763contigEcto-sp13_S_contig7763:1972..4444 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7763.19008.1mRNA_Ecto-sp13_S_contig7763.19008.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7763 1972..4444 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7763.19008.1 ID=prot_Ecto-sp13_S_contig7763.19008.1|Name=mRNA_Ecto-sp13_S_contig7763.19008.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=237bp
MALVLHSRISGSSSAAAAATLARHANACCRAGSPALGLLPGAVASSSTHR
AALSSDSSHGGDGSGHYDGAMRRRESCASRSRHRWSGQGAAAALGTTTTA
RRAPGGVAGASGQGPAAGSVRALSSSFLADAVRETATNHCIDRVVNGGLD
GTVPVDKDSPTVEVQDFVYDIDFAQRPSGASQSLADGPDPFELVSGELAG
LSDGIKSLIGTEHAVLNAAAKYFFELDGGKKIRPTMA
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