prot_Ecto-sp13_S_contig77620.19006.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig77620.19006.1
Unique Nameprot_Ecto-sp13_S_contig77620.19006.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length104
Homology
BLAST of mRNA_Ecto-sp13_S_contig77620.19006.1 vs. uniprot
Match: D8LTI7_ECTSI (Rhodanese domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTI7_ECTSI)

HSP 1 Score: 196 bits (499), Expect = 3.340e-56
Identity = 101/104 (97.12%), Postives = 102/104 (98.08%), Query Frame = 0
Query:    1 QETFPYTHGNGTADATVVDGYVSLGFSIKRGIVDREKGIEGPLLVLSTRTVTLDRLELTVANCRMAWLINLLTRLFSSTISTYVCRSLQEQVDEHASALLGTVN 104
            QETFPYT+GNGTADATVVDGYVSLGFSIKRGIVDREKGIEGPLLVLSTRTVTLDRL LTVANCRMAWLINLLTRLFSSTISTYVCRSLQEQVD HASALLGTVN
Sbjct:  942 QETFPYTYGNGTADATVVDGYVSLGFSIKRGIVDREKGIEGPLLVLSTRTVTLDRLGLTVANCRMAWLINLLTRLFSSTISTYVCRSLQEQVDGHASALLGTVN 1045          
BLAST of mRNA_Ecto-sp13_S_contig77620.19006.1 vs. uniprot
Match: A0A835YIM8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIM8_9STRA)

HSP 1 Score: 120 bits (301), Expect = 1.630e-29
Identity = 61/102 (59.80%), Postives = 80/102 (78.43%), Query Frame = 0
Query:    1 QETFPYTHGNGTADATVVDGYVSLGFSIKRGIVDREKGIEGPLLVLSTRTVTLDRLELTVANCRMAWLINLLTRLFSSTISTYVCRSLQEQVDEHASALLGT 102
            QETFPY  G GTADA VV+G V +GFS+KRG +    G+EGPLLV+S+RT+T++ L ++VAN R+AWL+NLL  LFS TI  YVCRSL++ +D++AS LL T
Sbjct:  918 QETFPYGSGTGTADAMVVNGSVRIGFSLKRGTLG---GVEGPLLVMSSRTITMEALTVSVANTRLAWLLNLLVSLFSETIKEYVCRSLKDTLDKNASELLRT 1016          
BLAST of mRNA_Ecto-sp13_S_contig77620.19006.1 vs. uniprot
Match: A0A813HX46_POLGL (Hypothetical protein (Fragment) n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813HX46_POLGL)

HSP 1 Score: 60.5 bits (145), Expect = 1.930e-8
Identity = 34/104 (32.69%), Postives = 57/104 (54.81%), Query Frame = 0
Query:    1 QETFPYTHGNGTADATVVDGYVSLGFSIKRGIVDREKGIEGPLLVLSTRTVTLDRLELTVANCRMAWLINLLTRLFSSTISTYVCRSLQEQVDEHASALLGTVN 104
            QE FP+   +  ADA      V   F +K G+  ++     P LV+S+R+V +D LEL V     A ++N L+ LF+  + +Y C+ + +Q+DE    L+ ++N
Sbjct:  922 QEFFPFLTADCIADAKAERMSVGFAFKLKPGVNGKQ-----PELVMSSRSVHMDHLELWVGETNYAVVVNALSFLFADVLKSYACQKIADQLDEQMEVLVASLN 1020          
BLAST of mRNA_Ecto-sp13_S_contig77620.19006.1 vs. uniprot
Match: A0A7S1R939_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1R939_ALECA)

HSP 1 Score: 60.1 bits (144), Expect = 2.530e-8
Identity = 37/116 (31.90%), Postives = 59/116 (50.86%), Query Frame = 0
Query:    1 QETFPYTHGNGTADATVVDGYVSLGFSIKRGIVDREKGIEGPLLVLSTRTVTLDRLEL------------TVANCRMAWLINLLTRLFSSTISTYVCRSLQEQVDEHASALLGTVN 104
            Q  FP+  G+G ADA      VS GF +  G     +    P+LV+S+R V+++ LEL             VA   +A +IN L+ LF++ +  Y C+ +   +D H  +L+G +N
Sbjct:  390 QTGFPFIEGSGVADAKAERMRVSFGFKLAPGPSSEGR----PVLVMSSRAVSMENLELWVSADKDAEIGQMVAQSSLAMIINPLSYLFANVLKDYACQKIASHLDNHLGSLVGALN 501          
BLAST of mRNA_Ecto-sp13_S_contig77620.19006.1 vs. uniprot
Match: A0A7S1A4I1_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1A4I1_NOCSC)

HSP 1 Score: 52.8 bits (125), Expect = 9.670e-6
Identity = 28/93 (30.11%), Postives = 51/93 (54.84%), Query Frame = 0
Query:    1 QETFPYTHGNGTADATVVDGYVSLGFSIKRGIVDREKGIEGPLLVLSTRTVTLDRLELTVANCRMAWLINLLTRLFSSTISTYVCRSLQEQVD 93
            Q  +P  H +G ADA      VS+ F +    V +      P L +S+R+V ++ L++T+A+   A ++N LT +F+  +  YVC  + +++D
Sbjct:  806 QVAWPNLHADGVADALAQRMSVSIAFHLHTDSVSKI-----PRLYMSSRSVAMEELDITIADSSFAPIVNALTYIFAEQLKVYVCEKIADRLD 893          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig77620.19006.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LTI7_ECTSI3.340e-5697.12Rhodanese domain-containing protein n=2 Tax=Ectoca... [more]
A0A835YIM8_9STRA1.630e-2959.80Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A813HX46_POLGL1.930e-832.69Hypothetical protein (Fragment) n=2 Tax=Polarella ... [more]
A0A7S1R939_ALECA2.530e-831.90Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
A0A7S1A4I1_NOCSC9.670e-630.11Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017943Bactericidal permeability-increasing protein, alpha/beta domain superfamilySUPERFAMILY55394Bactericidal permeability-increasing protein, BPIcoord: 35..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig77620contigEcto-sp13_S_contig77620:5..513 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig77620.19006.1mRNA_Ecto-sp13_S_contig77620.19006.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig77620 5..513 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig77620.19006.1 ID=prot_Ecto-sp13_S_contig77620.19006.1|Name=mRNA_Ecto-sp13_S_contig77620.19006.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=104bp
QETFPYTHGNGTADATVVDGYVSLGFSIKRGIVDREKGIEGPLLVLSTRT
VTLDRLELTVANCRMAWLINLLTRLFSSTISTYVCRSLQEQVDEHASALL
GTVN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017943Bactericidal_perm-incr_a/b_dom