prot_Ecto-sp13_S_contig7727.18964.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7727.18964.1
Unique Nameprot_Ecto-sp13_S_contig7727.18964.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length137
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7727.18964.1 vs. uniprot
Match: D7FL86_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL86_ECTSI)

HSP 1 Score: 235 bits (599), Expect = 1.860e-77
Identity = 134/137 (97.81%), Postives = 134/137 (97.81%), Query Frame = 0 
Query:    1 IEIFQDVLVYKRATIARKYVSTWFGPDVLGTVPFASLIGLFITTVDSLQSVNFLRXXXXXXXXXXXXXXXXSRKMAKVDFSRRLNPSIVRLIKLLGKIVFAGHLLGCTWFMVDECDVDGGDDMWRKCGGESLGSKVR 137
            IE FQDVLVYKRATIARKYVSTWFGPDVLGTVPFASLIGLFITTVDSLQSVNFLRXXXXXXXXXXXXXXXXSRKMAKVDFSRRLNPSIVRLIKLLGKIVFAGHLLGCTWFMVDECDVDGGDDMW KCGGESLGSK R
Sbjct:   20 IETFQDVLVYKRATIARKYVSTWFGPDVLGTVPFASLIGLFITTVDSLQSVNFLRXXXXXXXXXXXXXXXXSRKMAKVDFSRRLNPSIVRLIKLLGKIVFAGHLLGCTWFMVDECDVDGGDDMWPKCGGESLGSKAR 156
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BLAST of mRNA_Ecto-sp13_S_contig7727.18964.1 vs. uniprot
Match: A0A6H5KTC9_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTC9_9PHAE)

HSP 1 Score: 219 bits (559), Expect = 1.450e-69
Identity = 114/146 (78.08%), Postives = 116/146 (79.45%), Query Frame = 0 
Query:    5 QDVLVYKRATIARKYVSTWFGPDVLGTVPFASLIGLFITTVDSLQSVNFLRXXXXXXXXXXXXXXXX-------------SRKMAKVDFSRRLNPSIVRLIKLLGKIVFAGHLLGCTWFMVDECDVDGGDDMWRKCGGESLGSKVR 137
            +DVLVYKRATIARKYVSTWFGPDVLGTVPFASLIGLFITTVDSLQSVNFLR                             SRKMAKVDFSRRLNPSIVRLIKLLGKIVFAGHLLGCTWF+VDECDVDGGDDMW KCGGESLGSKVR
Sbjct:  131 EDVLVYKRATIARKYVSTWFGPDVLGTVPFASLIGLFITTVDSLQSVNFLRQDGFVFANYVVAALVRVFRLLKXXXXXXXSRKMAKVDFSRRLNPSIVRLIKLLGKIVFAGHLLGCTWFVVDECDVDGGDDMWPKCGGESLGSKVR 276
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BLAST of mRNA_Ecto-sp13_S_contig7727.18964.1 vs. uniprot
Match: D8LJT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJT9_ECTSI)

HSP 1 Score: 226 bits (577), Expect = 3.210e-66
Identity = 129/131 (98.47%), Postives = 130/131 (99.24%), Query Frame = 0 
Query:    5 QDVLVYKRATIARKYVSTWFGPDVLGTVPFASLIGLFITTVDSLQSVNFLRXXXXXXXXXXXXXXXXSRKMAKVDFSRRLNPSIVRLIKLLGKIVFAGHLLGCTWFMVDECDVDGGDDMWRKCGGESLGSK 135
            +DVLVYKRATIARKYVSTWFGPDVLGTVPFASLIGLFITTVDSLQSVNFLRXXXXXXXXXXXXXXXXSRKMAKVDFSRRLNPSIVRLIKLLGKIVFAGHLLGCTWFMVDECDVDGGDDMW KCGGESLGSK
Sbjct:  176 EDVLVYKRATIARKYVSTWFGPDVLGTVPFASLIGLFITTVDSLQSVNFLRXXXXXXXXXXXXXXXXSRKMAKVDFSRRLNPSIVRLIKLLGKIVFAGHLLGCTWFMVDECDVDGGDDMWPKCGGESLGSK 306
[Close]
BLAST of mRNA_Ecto-sp13_S_contig7727.18964.1 vs. uniprot
Match: A0A2D4BDQ3_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BDQ3_PYTIN)

HSP 1 Score: 52.4 bits (124), Expect = 3.840e-5
Identity = 43/119 (36.13%), Postives = 70/119 (58.82%), Query Frame = 0 
Query:    5 QDVLVYKRATIARKYVSTWFGPDVLGTVPFASLIGLFIT-----TVDSLQSVNFLRXXXXXXXXXXXXXXXXSRKMAKVDFSRRLNPSIVRLIKLLGKIVFAGHLLGCTWFMVDECDVD 118
            +D+L+  R  IA++YV+TWF PD++ ++P   + G  +      +V SL+    +RXXXXXXXXXXXX    +RK+  V     ++    RL +++G+++   H+L C W +V   D D
Sbjct:  165 EDMLITDRYLIAKRYVTTWFLPDLISSLPTEYIFGGVMDGSHDKSVVSLKLTRVIRXXXXXXXXXXXXLRQFARKIEDV---LEIDAVGARLSQVIGQVLLVTHILACFWHLVGYSDDD 280
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7727.18964.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FL86_ECTSI1.860e-7797.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KTC9_9PHAE1.450e-6978.08Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
D8LJT9_ECTSI3.210e-6698.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A2D4BDQ3_PYTIN3.840e-536.13Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.287.70coord: 3..122
e-value: 4.4E-6
score: 28.4
NoneNo IPR availablePANTHERPTHR10217:SF435POTASSIUM VOLTAGE-GATED CHANNEL PROTEIN EAGcoord: 6..124
NoneNo IPR availablePANTHERPTHR10217VOLTAGE AND LIGAND GATED POTASSIUM CHANNELcoord: 6..124
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 113..137
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 34..57
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 91..112
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 58..90
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..33
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 14..114
NoneNo IPR availableTMHMMTMhelixcoord: 20..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7727contigEcto-sp13_S_contig7727:5170..6277 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7727.18964.1mRNA_Ecto-sp13_S_contig7727.18964.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7727 5170..6277 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7727.18964.1 ID=prot_Ecto-sp13_S_contig7727.18964.1|Name=mRNA_Ecto-sp13_S_contig7727.18964.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=137bp
IEIFQDVLVYKRATIARKYVSTWFGPDVLGTVPFASLIGLFITTVDSLQS
VNFLRLVRVFRLLKLMRILRLSRKMAKVDFSRRLNPSIVRLIKLLGKIVF
AGHLLGCTWFMVDECDVDGGDDMWRKCGGESLGSKVR
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