prot_Ecto-sp13_S_contig77107.18950.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig77107.18950.1
Unique Nameprot_Ecto-sp13_S_contig77107.18950.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length126
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig77107.18950.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 97..111
score: 26.47
coord: 50..65
score: 37.18
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 16..45
e-value: 1.4E-5
score: 34.5
coord: 49..78
e-value: 0.0059
score: 25.8
coord: 81..110
e-value: 0.004
score: 26.4
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 81..113
score: 11.327
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 16..48
score: 14.239
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 49..81
score: 10.98
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 3..78
e-value: 1.6E-11
score: 44.7
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..126
score: 34.721
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..126
e-value: 3.1E-35
score: 123.5
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 3..124
NoneNo IPR availablePANTHERPTHR24123:SF37coord: 4..126
NoneNo IPR availablePANTHERPTHR24123ANKYRINcoord: 4..126

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig77107contigEcto-sp13_S_contig77107:196..573 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig77107.18950.1mRNA_Ecto-sp13_S_contig77107.18950.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig77107 196..573 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig77107.18950.1 ID=prot_Ecto-sp13_S_contig77107.18950.1|Name=mRNA_Ecto-sp13_S_contig77107.18950.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=126bp
TLWLHCGFDINGGDPNGFTPLMIAVVHGHSRVVTLLLERGADVSRKNGTG
ITALHISAASGNLAMTDMLIAAGANLEKTYQSATPLQLAMGGGHLEVVRA
MVKAGANVDRSHHSGATALSVAASDG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf