mRNA_Ecto-sp13_S_contig7691.18923.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7691.18923.1 vs. uniprot
Match: D8LT44_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT44_ECTSI) HSP 1 Score: 309 bits (791), Expect = 4.050e-102 Identity = 181/305 (59.34%), Postives = 204/305 (66.89%), Query Frame = 1
Query: 1 EPEEVVPRHKRRAVLLWTTLIVGIISYSTYKLYKGLKRREDPGTTFKLSNNIYQYPDLWVCLYVNYGCDEEELQEECVNSSNATEGGQTLAVFYSGGEHEQIIPGEQIRAIDK-VFCVEYETSTITTFLGQEPESSEYLDHILLDLITGKLDWD*L*AGTRVDTTISKLASRKGGGPTIRPTNSGYTSPSRTQEQGASPPKSHFRIPAFLIGQP--------VGSSRTWLNMWRSSVMP*PQKYFEYSAVGHRVQR----CKGGYMRPVRYDTHGSDLPRVRCSRKRYRFQTFYTNVGMRRHNGQ 876
+PEEVVPRHKRRAVLLWTTLIVGIISYSTY LY+GLKRREDPGTTFKLSNNIYQYPDLWVCLYVNYGCDE ELQEECVNSSNATEGG+TLAVFY GGE+EQ+IPGEQI + DK FCVEYETSTITTFLGQEPE+ EYLDHILLD+ W G D SK +G G T++ + + ++ G S +P I VG T + + FE +V Q+ CKGGYMRPV YDTHG+ L R RCSRKRYR Q F+ NVG+ R N Q
Sbjct: 3 KPEEVVPRHKRRAVLLWTTLIVGIISYSTYTLYRGLKRREDPGTTFKLSNNIYQYPDLWVCLYVNYGCDEMELQEECVNSSNATEGGETLAVFYPGGEYEQVIPGEQILSKDKGFFCVEYETSTITTFLGQEPETGEYLDHILLDM-----SWY---PGGYND---SKTCLAEGWG-----THNEWIYIT-FKDAGTGSLSSEIPLPYTCITNGSTSREFTHVGIEVTKVERLSGDI----DVTFEAKSVITTTQKIEVGCKGGYMRPVGYDTHGNGLSRARCSRKRYRVQAFHANVGICRDNDQ 286
BLAST of mRNA_Ecto-sp13_S_contig7691.18923.1 vs. uniprot
Match: D8LMD2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMD2_ECTSI) HSP 1 Score: 177 bits (449), Expect = 1.560e-49 Identity = 82/144 (56.94%), Postives = 108/144 (75.00%), Query Frame = 1
Query: 4 PEEVVPRHKRRAVLLWTTLIVGIISYSTYKLYKGLKRREDPGTTFKLSNNIYQYPDLWVCLYVNYGCDEEELQEECVNSSNATEGGQTLAVFYSGGEHEQIIPGEQIRAIDKVFCVEYETSTITTFLGQEPESSEYLDHILLDL 435
P+EV+P+HKRRAV LWT LI GII YS+ LY+ L +R +P +F++SN +Y+YPD+WVCLY YGCD EL+EEC+ S+ T G T AVFY GGE+EQ IPG + + +CVE+ETSTI+ FLGQE +S YLD++LLD+
Sbjct: 4 PDEVLPQHKRRAVALWTVLIGGIILYSSLILYQALGKRNNPSVSFEVSNTVYEYPDIWVCLYGEYGCDSWELEEECMESAQLTGWGNTSAVFYPGGEYEQTIPGVGMLTPEDGWCVEFETSTISQFLGQERNASYYLDYLLLDM 147
BLAST of mRNA_Ecto-sp13_S_contig7691.18923.1 vs. uniprot
Match: A0A6H5JN97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN97_9PHAE) HSP 1 Score: 169 bits (429), Expect = 1.350e-46 Identity = 79/147 (53.74%), Postives = 111/147 (75.51%), Query Frame = 1
Query: 1 EPEEVVPRHKRRAVLLWTTLIVGIISYSTYKLYKGLKRREDPGTTFKLSNNIYQYPDLWVCLYVNYGCDEEELQEECVNSS--NATEGGQTLAVFYSGGEHEQIIPGEQIRAIDKVFCVEYETSTITTFLGQEPESSEYLDHILLDL 435
+P+EVVP+HKRRAV LW LI GII YS+Y L+K +++R+ P ++ +LSN +++YPD+WVCLY +YGCDE EL+EEC+ S+ N T G + AV+Y GGE+EQ I E D +CVE++TS IT FLG+E ++S +LDH+LLD+
Sbjct: 3 KPDEVVPQHKRRAVALWAILIGGIIFYSSYLLHKAVRKRDAPESSIELSNTVFEYPDIWVCLYADYGCDELELEEECMTSATANMTGWGNSSAVYYPGGEYEQEIHVEGRETPDHGWCVEFQTSKITRFLGEERDASRFLDHLLLDM 149
BLAST of mRNA_Ecto-sp13_S_contig7691.18923.1 vs. uniprot
Match: D8LMD1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMD1_ECTSI) HSP 1 Score: 160 bits (405), Expect = 2.050e-42 Identity = 77/146 (52.74%), Postives = 106/146 (72.60%), Query Frame = 1
Query: 4 PEEVVPRHKRRAVLLWTTLIVGIISYSTYKLYKGLKRREDPGTTFKLSNNIYQYPDLWVCLYVNYGCDEEELQEECVNSS--NATEGGQTLAVFYSGGEHEQIIPGEQIRAIDKVFCVEYETSTITTFLGQEPESSEYLDHILLDL 435
P+EVVP+HKRRAV LWT LI GII YS+Y LY +++RE+P + +LSN +++YPD+WVCLYV YGCDE EL+ EC+ S+ N T G + AV+Y GG +EQ I E + +CVE++TS IT FL +E ++ YLD++LLD+
Sbjct: 76 PDEVVPQHKRRAVALWTILIGGIIFYSSYLLYTAVRKRENPDASIELSNTVFEYPDIWVCLYVAYGCDEWELENECMTSATGNRTGWGNSSAVYYPGGVYEQEIHVEGKLTPNNGWCVEFQTSKITRFLDRERDAKYYLDYLLLDM 221
BLAST of mRNA_Ecto-sp13_S_contig7691.18923.1 vs. uniprot
Match: A0A6H5L518_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L518_9PHAE) HSP 1 Score: 138 bits (348), Expect = 3.130e-34 Identity = 74/164 (45.12%), Postives = 102/164 (62.20%), Query Frame = 1
Query: 1 EPEEVVPRHKRRAVLLWTTLIVGIISYSTYKLYKGLKRREDPGTTFKLSNNIYQYPDLWVCLYVNYGCDEEELQEECVNSSNATEGGQTLAVFYSGGE--HEQIIPGEQ--IRAIDKVF---------------CVEYETSTITTFLGQEPESSEYLDHILLDL 435
+P +VV H+RRAV++WT + I+SY + YK ++ + P T+F L+N +Y++PDLW+CLYVNYGCDE EL+E+CVNS+ TEGG AVFY + EQ I EQ I AI + CV + TS T F+GQE + E+LD+ILLD+
Sbjct: 39 KPGQVVESHRRRAVVVWTVSVAAILSYCGWLFYKAAEKAKAPDTSFLLTNEVYKFPDLWICLYVNYGCDELELEEKCVNSAWTTEGGVPNAVFYPRVQLDQEQEITTEQLQIEAIPENTDVDSEGNSLEDGRGKCVIFRTSAATAFVGQERDPHEFLDYILLDM 202
BLAST of mRNA_Ecto-sp13_S_contig7691.18923.1 vs. uniprot
Match: D8LNQ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNQ1_ECTSI) HSP 1 Score: 135 bits (340), Expect = 7.940e-34 Identity = 72/163 (44.17%), Postives = 100/163 (61.35%), Query Frame = 1
Query: 1 EPEEVVPRHKRRAVLLWTTLIVGIISYSTYKLYKGLKRREDPGTTFKLSNNIYQYPDLWVCLYVNYGCDEEELQEECVNSSNATEGGQTLAVFYSGGEHEQIIPGE----QIRAIDKVF---------------CVEYETSTITTFLGQEPESSEYLDHILLD 432
+P EV+ H+RRAV++WT +V II+YS + YK ++ + P T+F L+N +Y+ PDLW+CLY NYGCDE EL+EECV+S+ TEGG+ AVFY + +Q+ QI AI + CV + TS T F+GQE + EYLD+I LD
Sbjct: 3 KPSEVLESHRRRAVVVWTVSVVAIIAYSGWLFYKAAEKAKSPDTSFVLTNEVYKNPDLWICLYNNYGCDEWELEEECVDSAWMTEGGEPDAVFYPRVKLDQLQETTTEELQIEAIPENTDYDSEGNYVEDGRGQCVIFRTSAATAFVGQERDPHEYLDYIHLD 165
BLAST of mRNA_Ecto-sp13_S_contig7691.18923.1 vs. uniprot
Match: D8LNQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNQ3_ECTSI) HSP 1 Score: 136 bits (343), Expect = 1.070e-33 Identity = 72/164 (43.90%), Postives = 101/164 (61.59%), Query Frame = 1
Query: 1 EPEEVVPRHKRRAVLLWTTLIVGIISYSTYKLYKGLKRREDPGTTFKLSNNIYQYPDLWVCLYVNYGCDEEELQEECVNSSNATEGGQTLAVFYSGGE----HEQIIPGEQIRAIDKV---------------FCVEYETSTITTFLGQEPESSEYLDHILLDL 435
+P EV+ H+RRAV++WT +V I +YS + YK ++ + P T+F L+N +Y+YPDLW+C YVNYGCD EL+EECV+S+ TEGG+ AVFY + H+ +I AI + CV +ETS T F+GQE +S EYLD+I LD+
Sbjct: 16 KPGEVLESHRRRAVVVWTGSVVAIFAYSGWLCYKAAEKAKAPDTSFVLTNVVYKYPDLWICPYVNYGCDAWELEEECVDSAWMTEGGEPDAVFYPREKLDQLHQVTTEERKIAAIPDLTNFDSEGNFVEDGRGHCVIFETSAATDFVGQERDSHEYLDYIHLDM 179
BLAST of mRNA_Ecto-sp13_S_contig7691.18923.1 vs. uniprot
Match: D7FXH8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXH8_ECTSI) HSP 1 Score: 133 bits (335), Expect = 1.350e-32 Identity = 70/158 (44.30%), Postives = 99/158 (62.66%), Query Frame = 1
Query: 1 EPEEVVPRHKRRAVLLWTTLIVGIISYSTYKLYKGLKRREDPGTTFKLSNNIYQYPDLWVCLYVNYGCDEEELQEECVNSSNATEGGQTLAVFYS--GGEHEQIIPGE------QIRAIDKV-----FCVEYETSTITTFLGQEPESSEYLDHILLDL 435
+P+EVVP H+RRA +LW ++VGI++Y + +YK ++R + P T+ +LSN +Y YPDLWVC Y YGCD+ L+ CV SS TE G A+FY+ G + P E AI+ + CVE++TS T F+GQE + EYLD+ILLD+
Sbjct: 3 KPDEVVPDHRRRARVLWAIMMVGIVTYVGWLVYKTVERTKSPNTSVELSNVVYTYPDLWVCPYNQYGCDDITLELGCVESSWETEAGPPNAIFYNSEGTDQNATDPLEIEATWVDTSAIEGIVKGRGLCVEFKTSAATAFVGQERDPDEYLDYILLDM 160
BLAST of mRNA_Ecto-sp13_S_contig7691.18923.1 vs. uniprot
Match: D8LNS2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNS2_ECTSI) HSP 1 Score: 133 bits (334), Expect = 2.210e-32 Identity = 70/163 (42.94%), Postives = 101/163 (61.96%), Query Frame = 1
Query: 1 EPEEVVPRHKRRAVLLWTTLIVGIISYSTYKLYKGLKRREDPGTTFKLSNNIYQYPDLWVCLYVNYGCDEEELQEECVNSSNATEGGQTLAVFYSGGEHEQIIPGE----QIRAIDKVF---------------CVEYETSTITTFLGQEPESSEYLDHILLD 432
+P EV+ H+RRAV++WT +V I +YS + YK ++ + P T+F L+N +Y++PDLW+CL+VNYGCDE EL+E CV+S+ TEGG AVFY + +Q+ QI AI + CV ++TS TTF+GQE + EYLD++ LD
Sbjct: 15 KPSEVLEPHRRRAVVVWTVSVVAIFAYSGWLCYKAAEKAKAPDTSFVLTNEVYKFPDLWICLFVNYGCDEWELEEGCVDSAWMTEGGVPDAVFYPRVKLDQLQETTTEELQIEAIPENTDYDSEGNYVEDGRGQCVIFKTSAATTFVGQERDPHEYLDYVHLD 177
BLAST of mRNA_Ecto-sp13_S_contig7691.18923.1 vs. uniprot
Match: A0A6H5K474_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K474_9PHAE) HSP 1 Score: 128 bits (322), Expect = 1.120e-30 Identity = 59/120 (49.17%), Postives = 88/120 (73.33%), Query Frame = 1
Query: 82 STYKLYKGLKRREDPGTTFKLSNNIYQYPDLWVCLYVNYGCDEEELQEECVNSS--NATEGGQTLAVFYSGGEHEQIIPGEQIRAIDKVFCVEYETSTITTFLGQEPESSEYLDHILLDL 435
S+Y LYK +++R +P + +LSN +++YPD+WVCLYV+YGCDE EL+EEC+ S+ N T G + AV+Y GG +EQ I E+ + +CVE++TS IT FLG+E ++ YLD++LLD+
Sbjct: 70 SSYLLYKAVRKRNNPDASIELSNTVFEYPDVWVCLYVDYGCDEWELEEECMTSATANRTGWGHSSAVYYPGGVYEQEIHVEEKLTPNNGWCVEFQTSKITRFLGRERDAKYYLDYLLLDM 189 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7691.18923.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7691.18923.1 >prot_Ecto-sp13_S_contig7691.18923.1 ID=prot_Ecto-sp13_S_contig7691.18923.1|Name=mRNA_Ecto-sp13_S_contig7691.18923.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=154bp EPEEVVPRHKRRAVLLWTTLIVGIISYSTYKLYKGLKRREDPGTTFKLSNback to top mRNA from alignment at Ecto-sp13_S_contig7691:1542..4231+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7691.18923.1 ID=mRNA_Ecto-sp13_S_contig7691.18923.1|Name=mRNA_Ecto-sp13_S_contig7691.18923.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2690bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7691:1542..4231+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7691:1542..4231+ >mRNA_Ecto-sp13_S_contig7691.18923.1 ID=mRNA_Ecto-sp13_S_contig7691.18923.1|Name=mRNA_Ecto-sp13_S_contig7691.18923.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=462bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7691:1542..4231+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |