mRNA_Ecto-sp13_S_contig7656.18881.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7656.18881.1 vs. uniprot
Match: A0A6H5K4Q5_9PHAE (JmjC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4Q5_9PHAE) HSP 1 Score: 281 bits (718), Expect = 1.200e-91 Identity = 136/159 (85.53%), Postives = 140/159 (88.05%), Query Frame = 1
Query: 1 MTVIVGTDDDKEPIRLSMKDFERYSDTNTDDTPMYVFDWRVYDNDVGREAMSEYRVPSIFTEDLFQLVQGRKDYPSHRW-----------------LLVGPKRSGSNIHNDPLGTSAWNTLLSGRKLWFIAPPHLESALLKTREACTAKWFLEEVPKIQ 426
MTV+VGTDDD EPIRLSMKDFERYSDTNTDDTPMYVFDWRVYD+DVG+EAMSEYRVPSIFTEDLFQLVQG KDYPSHRW LLVGPKRSGSNIHNDPLGTSAWNTLLSGRKLWFIAPPHLESALLKTRE+CTAKWFLEEVPKIQ
Sbjct: 67 MTVMVGTDDDNEPIRLSMKDFERYSDTNTDDTPMYVFDWRVYDDDVGKEAMSEYRVPSIFTEDLFQLVQGHKDYPSHRWGTRVPDCRGGLDPLLRWLLVGPKRSGSNIHNDPLGTSAWNTLLSGRKLWFIAPPHLESALLKTRESCTAKWFLEEVPKIQ 225
BLAST of mRNA_Ecto-sp13_S_contig7656.18881.1 vs. uniprot
Match: D7FPH7_ECTSI (JmjC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPH7_ECTSI) HSP 1 Score: 241 bits (614), Expect = 7.960e-79 Identity = 112/121 (92.56%), Postives = 116/121 (95.87%), Query Frame = 1
Query: 1 MTVIVGTDDDKEPIRLSMKDFERYSDTNTDDTPMYVFDWRVYDNDVGREAMSEYRVPSIFTEDLFQLVQGRKDYPSHRWLLVGPKRSGSNIHNDPLGTSAWNTLLSGRKLWFIAPPHLESA 363
MTV VGTDD+ +PIRLSMKDFERYSDTNTDDTPMYVFDWRVYD+ VG+EAMSEYRVPSIFTEDLFQLVQG KDYPSHRWLLVGPKRSGSNIHNDPLGTSAWNTLLSGRKLWFIAPPHLE A
Sbjct: 87 MTVTVGTDDEDKPIRLSMKDFERYSDTNTDDTPMYVFDWRVYDDHVGKEAMSEYRVPSIFTEDLFQLVQGHKDYPSHRWLLVGPKRSGSNIHNDPLGTSAWNTLLSGRKLWFIAPPHLECA 207
BLAST of mRNA_Ecto-sp13_S_contig7656.18881.1 vs. uniprot
Match: A0A1V9YYZ9_9STRA (Histone arginine demethylase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YYZ9_9STRA) HSP 1 Score: 134 bits (337), Expect = 5.890e-35 Identity = 61/122 (50.00%), Postives = 82/122 (67.21%), Query Frame = 1
Query: 13 VGTDDDKEPIRLSMKDFERYSDTNTDDTPMYVFDWRVYDNDVGREAMSEYRVPSIFTEDLFQLVQGRKDYPSHRWLLVGPKRSGSNIHNDPLGTSAWNTLLSGRKLWFIAPPHLESALLKTR 378
VG DDD + +R+ K F +Y T TDD+P+Y+FD D + + +Y+VP F +DLF LV G P +RW LVGPKRSG+ +H DPLGTSAWNTLL GRK W + PPH++ A++K +
Sbjct: 142 VGEDDDGKTLRMKFKHFCKYMKTQTDDSPLYIFDSTFDDKKETTQLLHDYKVPKYFPDDLFSLV-GESRRPPYRWFLVGPKRSGTCVHLDPLGTSAWNTLLVGRKRWVVFPPHVDKAIVKAK 262
BLAST of mRNA_Ecto-sp13_S_contig7656.18881.1 vs. uniprot
Match: D7G461_ECTSI (JMJD6 protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G461_ECTSI) HSP 1 Score: 135 bits (339), Expect = 6.120e-35 Identity = 62/144 (43.06%), Postives = 95/144 (65.97%), Query Frame = 1
Query: 16 GTDDDKEPIRLSMKDFERYSDTNTDDTPMYVFDWRVYDNDVGREAMSEYRVPSIFTEDLFQLVQGRKDYPSHRWLLVGPKRSGSNIHNDPLGTSAWNTLLSGRKLWFIAPPHLESALLKTREACTA-------KWFLEEVPKIQ 426
G DDD +++ +K F RY D TDD+P+Y+FD D++V + + ++ VP F +DLF LV G + P +RW LVGPKRSG+++H DPLGTSAWNT++SGRKLW + PPH++ + K ++ +F++ +P+I+
Sbjct: 131 GEDDDGYSVKVKLKYFLRYMDHQTDDSPLYIFDSHFDDHEVAKGLLEDFFVPHYFPDDLFSLV-GERRRPPYRWFLVGPKRSGTSVHIDPLGTSAWNTVVSGRKLWVLFPPHVDKNVAKGKDVIRQGEDDEPINYFVDLLPRIR 273
BLAST of mRNA_Ecto-sp13_S_contig7656.18881.1 vs. uniprot
Match: A0A7S3A9P3_9RHOD (Hypothetical protein (Fragment) n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A9P3_9RHOD) HSP 1 Score: 131 bits (330), Expect = 2.200e-34 Identity = 62/122 (50.82%), Postives = 80/122 (65.57%), Query Frame = 1
Query: 13 VGTDDDKEPIRLSMKDFERYSDTNTDDTPMYVFDWRVYDNDVGREAMSEYRVPSIFTEDLFQLVQGRKDYPSHRWLLVGPKRSGSNIHNDPLGTSAWNTLLSGRKLWFIAPPHLESALLKTR 378
VG DDD +R+ MK F RY + TDD+P+Y+FD R D R + +Y VP F EDLF L+ G P +RW LVGPKRSGS +H DPLGTSAWN L+SGRK W + PP++ ++K +
Sbjct: 114 VGDDDDGYAVRIKMKYFLRYMMSQTDDSPLYIFDSRFIKLDGSRILIGDYEVPKYFREDLFHLM-GEHRRPPYRWFLVGPKRSGSGVHIDPLGTSAWNALISGRKRWILFPPNVPKKIVKAK 234
BLAST of mRNA_Ecto-sp13_S_contig7656.18881.1 vs. uniprot
Match: A0A482T184_9ARCH (JmjC domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T184_9ARCH) HSP 1 Score: 132 bits (331), Expect = 2.800e-34 Identity = 62/144 (43.06%), Postives = 91/144 (63.19%), Query Frame = 1
Query: 16 GTDDDKEPIRLSMKDFERYSDTNTDDTPMYVFDWRVYDNDVGREAMSEYRVPSIFTEDLFQLVQGRKDYPSHRWLLVGPKRSGSNIHNDPLGTSAWNTLLSGRKLWFIAPPHLESALLKTREAC-------TAKWFLEEVPKIQ 426
G DDD I++ +K F Y NTDD+P+Y+FD Y++ R M+++++PS F +DLF LV G K P +RW L+GP+RSGS +H DPLGTSAWNTL+SGRK W + P + ++K +E +F + +P+I+
Sbjct: 118 GEDDDGYKIKMKLKYFLNYLHNNTDDSPLYIFDSNFYEDSSSRSIMNDFKLPSYFPDDLFSLV-GEKKRPPYRWFLIGPERSGSTVHIDPLGTSAWNTLISGRKRWVLFRPGVAKHIVKGKEVIKKGEDDEAINFFTDLLPRIK 260
BLAST of mRNA_Ecto-sp13_S_contig7656.18881.1 vs. uniprot
Match: A0A8J9SMN6_PHATR (Hypothetical protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9SMN6_PHATR) HSP 1 Score: 126 bits (317), Expect = 1.350e-33 Identity = 55/121 (45.45%), Postives = 83/121 (68.60%), Query Frame = 1
Query: 16 GTDDDKEPIRLSMKDFERYSDTNTDDTPMYVFDWRVYDNDVGREAMSEYRVPSIFTEDLFQLVQGRKDYPSHRWLLVGPKRSGSNIHNDPLGTSAWNTLLSGRKLWFIAPPHLESALLKTR 378
G DDD + +++ +K F +Y +N DD+P+Y+FD ++ + +++YRVPS F++DLFQLV + P +RW LVGP+RSGS +H DPL TSAWNTL+ G+K W + PP + ++K R
Sbjct: 64 GEDDDGKSVKVKLKHFIKYLQSNADDSPLYIFDTSFEEDRKAKRVLADYRVPSYFSDDLFQLVSEARR-PPYRWFLVGPERSGSTVHVDPLATSAWNTLMFGKKRWVLFPPQVPKQVVKGR 183
BLAST of mRNA_Ecto-sp13_S_contig7656.18881.1 vs. uniprot
Match: A0A1V9ZZA0_9STRA (Histone arginine demethylase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZZA0_9STRA) HSP 1 Score: 130 bits (326), Expect = 2.270e-33 Identity = 60/122 (49.18%), Postives = 80/122 (65.57%), Query Frame = 1
Query: 13 VGTDDDKEPIRLSMKDFERYSDTNTDDTPMYVFDWRVYDNDVGREAMSEYRVPSIFTEDLFQLVQGRKDYPSHRWLLVGPKRSGSNIHNDPLGTSAWNTLLSGRKLWFIAPPHLESALLKTR 378
VG DDD + +R+ K F +Y T DD+P+Y+FD D + + +Y+VP F +DLF LV G P +RW LVGPKRSG+ +H DPLGTSAWNTLL GRK W + PPH++ L+K +
Sbjct: 143 VGEDDDGKTLRMKFKHFCKYMKTQIDDSPLYIFDSTFDDKKETTQLLHDYKVPKYFPDDLFSLV-GEDCRPPYRWFLVGPKRSGTCVHLDPLGTSAWNTLLVGRKRWVVFPPHVDKRLVKAK 263
BLAST of mRNA_Ecto-sp13_S_contig7656.18881.1 vs. uniprot
Match: A0A662YDJ8_9STRA (JmjC domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YDJ8_9STRA) HSP 1 Score: 129 bits (325), Expect = 5.200e-33 Identity = 63/144 (43.75%), Postives = 88/144 (61.11%), Query Frame = 1
Query: 16 GTDDDKEPIRLSMKDFERYSDTNTDDTPMYVFDWRVYDNDVGREAMSEYRVPSIFTEDLFQLVQGRKDYPSHRWLLVGPKRSGSNIHNDPLGTSAWNTLLSGRKLWFIAPPHLESALL-------KTREACTAKWFLEEVPKIQ 426
G DDD + IR+ K F Y DD+P+Y+FD D + + +S+YRVP F EDLF+LV G P +RW LVGPKRSG+ +H DPLG+SAWNTLL GRK W + PPH+ L+ K + +F++ +P+++
Sbjct: 150 GEDDDGKSIRMKFKHFMSYLKRQNDDSPLYIFDSSFDDREDTKPLLSDYRVPKYFPEDLFELV-GEDRRPPYRWFLVGPKRSGTTLHLDPLGSSAWNTLLVGRKRWVLFPPHVPKGLVNGKKHVRKGEDDEAVNYFMDLLPRLK 292
BLAST of mRNA_Ecto-sp13_S_contig7656.18881.1 vs. uniprot
Match: A0A812PTU1_SYMMI (Jmjd6-a protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812PTU1_SYMMI) HSP 1 Score: 127 bits (318), Expect = 6.080e-33 Identity = 60/145 (41.38%), Postives = 88/145 (60.69%), Query Frame = 1
Query: 13 VGTDDDKEPIRLSMKDFERYSDTNTDDTPMYVFDWRVYDNDVGREAMSEYRVPSIFTEDLFQLVQGRKDYPSHRWLLVGPKRSGSNIHNDPLGTSAWNTLLSGRKLWFIAPPHLESALLKTREACT-------AKWFLEEVPKIQ 426
VG DDD +++ +K + Y DD+P+Y+FD + + VG+ + EY VPS F EDLF LV G K P +RW LVGP RSG+ +H DPLGTSAWNT+L G KLW + PP + ++K + +F++ +P+++
Sbjct: 109 VGEDDDGYSVKMRLKHYLNYRKRTKDDSPLYIFDSKFESDAVGKSLLDEYSVPSFFPEDLFSLV-GEKRRPPYRWFLVGPARSGTTVHIDPLGTSAWNTVLKGCKLWVLFPPGVAKRVVKGLDVIAKGEDDEAVNYFVDLIPRMR 252 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7656.18881.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7656.18881.1 >prot_Ecto-sp13_S_contig7656.18881.1 ID=prot_Ecto-sp13_S_contig7656.18881.1|Name=mRNA_Ecto-sp13_S_contig7656.18881.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=143bp MTVIVGTDDDKEPIRLSMKDFERYSDTNTDDTPMYVFDWRVYDNDVGREAback to top mRNA from alignment at Ecto-sp13_S_contig7656:3662..6540- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7656.18881.1 ID=mRNA_Ecto-sp13_S_contig7656.18881.1|Name=mRNA_Ecto-sp13_S_contig7656.18881.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2879bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7656:3662..6540- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7656:3662..6540- >mRNA_Ecto-sp13_S_contig7656.18881.1 ID=mRNA_Ecto-sp13_S_contig7656.18881.1|Name=mRNA_Ecto-sp13_S_contig7656.18881.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=429bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7656:3662..6540- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |