prot_Ecto-sp13_S_contig12245.1888.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12245.1888.1
Unique Nameprot_Ecto-sp13_S_contig12245.1888.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length138
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12245.1888.1 vs. uniprot
Match: D8LPA7_ECTSI (Cathepsine B n=2 Tax=root TaxID=1 RepID=D8LPA7_ECTSI)

HSP 1 Score: 264 bits (674), Expect = 1.090e-85
Identity = 123/132 (93.18%), Postives = 128/132 (96.97%), Query Frame = 0 
Query:    1 MYSYDGLSIFEGPTEDDEYVGGHVAVLFVFAEEVNGVEEGFDGDTWFIKNSWSASWPIKSPASKGLFYMRAGKNCCGVESRASCAQPVITDEIRKNMVPLKESRYHGYSEYVSDPERANFITKATKLRTLVK 132
            MYSYDGLSIFEGPT+DDEYVGGH AVLF FAEEVNGVEEGFDGDTWFIKNSWSASWPIKSPASKGLFYMRAG NCCGVESRASCAQPVIT+E+R+NMVPLKES YHGYSEYVSDPERANFITKAT+LRTLVK
Sbjct:  250 MYSYDGLSIFEGPTDDDEYVGGHAAVLFGFAEEVNGVEEGFDGDTWFIKNSWSASWPIKSPASKGLFYMRAGINCCGVESRASCAQPVITEELRRNMVPLKESSYHGYSEYVSDPERANFITKATRLRTLVK 381
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BLAST of mRNA_Ecto-sp13_S_contig12245.1888.1 vs. uniprot
Match: B5LWL5_9PHYC (Putative cysteine protease n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWL5_9PHYC)

HSP 1 Score: 139 bits (349), Expect = 3.760e-37
Identity = 71/133 (53.38%), Postives = 93/133 (69.92%), Query Frame = 0 
Query:    1 MYSYDGLSIFEGPTEDDEYVGGHVAVLFVFAEE-VNGVEEGFD--GDTWFIKNSWSASWPIKSPASKGLFYMRAGKNCCGVESRASCAQPVITDEIRKNMVP-LKESRYHGYSEYVSDPERANFITKATKLRT 129
            +Y YDGLS+++G  +D E+VGGH  V   + +E +NGVE GFD  G  W I+NSWS  WP+KSPAS+G FY++ G N CG+ESRAS A  V TDEI  N V  L ESRY  Y+ YV+DP+R   +++ TKLR+
Sbjct:  227 LYDYDGLSVYQGH-DDSEFVGGHSVVCVGYCDEGINGVEPGFDVPGGYWVIRNSWS-DWPLKSPASEGYFYIQKGSNVCGIESRASRALVVPTDEILNNTVANLNESRYVSYTSYVNDPDRQLLVSRVTKLRS 357
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12245.1888.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LPA7_ECTSI1.090e-8593.18Cathepsine B n=2 Tax=root TaxID=1 RepID=D8LPA7_ECT... [more]
B5LWL5_9PHYC3.760e-3753.38Putative cysteine protease n=1 Tax=Feldmannia spec... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.70.10coord: 1..98
e-value: 1.0E-9
score: 40.4
IPR000668Peptidase C1A, papain C-terminalPFAMPF00112Peptidase_C1coord: 42..84
e-value: 2.0E-4
score: 21.6
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 21..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12245contigEcto-sp13_S_contig12245:361..774 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12245.1888.1mRNA_Ecto-sp13_S_contig12245.1888.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12245 1..774 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12245.1888.1 ID=prot_Ecto-sp13_S_contig12245.1888.1|Name=mRNA_Ecto-sp13_S_contig12245.1888.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=138bp
MYSYDGLSIFEGPTEDDEYVGGHVAVLFVFAEEVNGVEEGFDGDTWFIKN
SWSASWPIKSPASKGLFYMRAGKNCCGVESRASCAQPVITDEIRKNMVPL
KESRYHGYSEYVSDPERANFITKATKLRTLVKRKQTR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000668Peptidase_C1A_C
IPR038765Papain-like_cys_pep_sf