prot_Ecto-sp13_S_contig7649.18868.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7649.18868.1
Unique Nameprot_Ecto-sp13_S_contig7649.18868.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length114
Homology
BLAST of mRNA_Ecto-sp13_S_contig7649.18868.1 vs. uniprot
Match: D8LK78_ECTSI (Ubiquinol cytochrome c reductase subunit QCR7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK78_ECTSI)

HSP 1 Score: 211 bits (538), Expect = 3.400e-69
Identity = 111/113 (98.23%), Postives = 113/113 (100.00%), Query Frame = 0
Query:    1 MARLLKKAGDFVLDVAATQYKRSMTRKLNAFGLKYDDLMIEEDPDVAEAVRRLTPEQQLARKRRQFRAFDISLKKTPLPDHIQAVQDPFEPYLQDIIKEVREERLERELLNQR 113
            MAR+LKKAGDFVLDVAATQYKRSMTRKLNAFGLK+DDLMIEEDPDVAEAVRRLTPEQQLARKRRQFRAFDISLKKTPLPDHIQAVQDPFEPYLQDIIKEVREERLERELLNQR
Sbjct:    1 MARVLKKAGDFVLDVAATQYKRSMTRKLNAFGLKFDDLMIEEDPDVAEAVRRLTPEQQLARKRRQFRAFDISLKKTPLPDHIQAVQDPFEPYLQDIIKEVREERLERELLNQR 113          
BLAST of mRNA_Ecto-sp13_S_contig7649.18868.1 vs. uniprot
Match: A0A7S2FYD9_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FYD9_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 2.940e-21
Identity = 50/103 (48.54%), Postives = 66/103 (64.08%), Query Frame = 0
Query:    9 GDFVLDVAATQYKRSMTRKLNAFGLKYDDLMIEEDPDVAEAVRRLTPEQQLARKRRQFRAFDISLKKTPLPDHIQAVQDPFEPYLQDIIKEVREERLERELLN 111
            G  V +  A  Y+  + ++LN +GLKYDD++ E DPDV  A+ R+  + Q+AR RR  RA DIS KK PLP   Q    P EPY++ I+ E+R  RLERELLN
Sbjct:    7 GKNVWNSVAKVYQAGVVQRLNQYGLKYDDILNESDPDVKIALSRMPGDLQVARDRRLKRALDISFKKKPLPADFQKTLTPLEPYMESIVDEMRSLRLERELLN 109          
BLAST of mRNA_Ecto-sp13_S_contig7649.18868.1 vs. uniprot
Match: A0A7S2GXC5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GXC5_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 3.370e-20
Identity = 51/107 (47.66%), Postives = 68/107 (63.55%), Query Frame = 0
Query:    5 LKKAGDFVLDVAATQYKRSMTRKLNAFGLKYDDLMIEEDPDVAEAVRRLTPEQQLARKRRQFRAFDISLKKTPLPDHIQAVQDPFEPYLQDIIKEVREERLERELLN 111
            L+  G    +V A  Y+  + ++LN +GLKY+D++ E  PDV +AV RL P+ Q +R RR  RA DIS KK PLP  IQ    P +PY+  ++ E RE RLERELLN
Sbjct:    3 LEMVGKRAWNVLAGGYQTMVIQRLNQYGLKYNDILNEALPDVQKAVSRLDPDMQQSRDRRIKRALDISFKKKPLPMDIQKKLFPLDPYIDSLLDEARELRLERELLN 109          
BLAST of mRNA_Ecto-sp13_S_contig7649.18868.1 vs. uniprot
Match: F0Y9P6_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9P6_AURAN)

HSP 1 Score: 82.8 bits (203), Expect = 1.680e-18
Identity = 45/87 (51.72%), Postives = 59/87 (67.82%), Query Frame = 0
Query:   25 TRKLNAFGLKYDDLMIEEDPDVAEAVRRLTPEQQLARKRRQFRAFDISLKKTPLPDHIQAVQDPFEPYLQDIIKEVREERLERELLN 111
            +R LN +GLKYDD+ IE+D D A+A+ R++ E+  AR RR  RAFDIS KK  LP  +Q +Q P  PY   +I E +  R+ERELLN
Sbjct:    1 SRSLNQYGLKYDDVKIEQDADYAKALGRISDEEVQARARRMKRAFDISFKKKSLPADLQRLQAPLAPYATPLIDEAKARRVERELLN 87          
BLAST of mRNA_Ecto-sp13_S_contig7649.18868.1 vs. uniprot
Match: A0A7R9U2G2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2G2_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 1.140e-16
Identity = 44/100 (44.00%), Postives = 66/100 (66.00%), Query Frame = 0
Query:   12 VLDVAATQYKRSMTRKLNAFGLKYDDLMIEEDPDVAEAVRRLTPEQQLARKRRQFRAFDISLKKTPLPDHIQAVQDPFEPYLQDIIKEVREERLERELLN 111
            +++  A  Y  S+TR L  +GL+YDD++ E  P V EA+ RLTPE+++ R RR  RA D+S KK  +P+ +Q   DPF+ YL D  ++  +E+ ERE+LN
Sbjct:   44 IMNAVAKAYSESVTRSLQRYGLRYDDVVNEALPSVQEALTRLTPEEKVGRDRRLKRALDLSFKKKTMPEEMQNY-DPFQKYLYDHKEKALKEQDEREILN 142          
BLAST of mRNA_Ecto-sp13_S_contig7649.18868.1 vs. uniprot
Match: A0A4D9D4E8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D4E8_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 1.740e-16
Identity = 45/98 (45.92%), Postives = 63/98 (64.29%), Query Frame = 0
Query:   14 DVAATQYKRSMTRKLNAFGLKYDDLMIEEDPDVAEAVRRLTPEQQLARKRRQFRAFDISLKKTPLPDHIQAVQDPFEPYLQDIIKEVREERLERELLN 111
            D   + Y + +  +LN +GL+Y DL +E D  V +A+  L+PE+QLAR+RR  RA +ISLKK  LP  +Q +Q P +PYL   + EV  E  ER+LLN
Sbjct:    9 DGLRSSYTKLVVGELNNYGLRYQDLFLE-DQAVTKAIHHLSPEEQLARERRIKRAIEISLKKKYLPADLQKMQTPLKPYLSHALDEVEAEETERKLLN 105          
BLAST of mRNA_Ecto-sp13_S_contig7649.18868.1 vs. uniprot
Match: A0A1X6NXZ7_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NXZ7_PORUM)

HSP 1 Score: 76.6 bits (187), Expect = 9.750e-16
Identity = 39/93 (41.94%), Postives = 62/93 (66.67%), Query Frame = 0
Query:   16 AATQYKRSMTRKLNAFGLKYDDLMIEEDPDVAEAVRRLTPEQQLARKRRQFRAFDISLKKTPLPDHIQAVQDPFEPYLQDIIKEVREERLERE 108
            AA  Y+ ++  +L  +GL+YDDL+ E DP+V + +R + PE+   R +R  RA D+ LKKT LPD IQA QD + PY++  +  +++ +LER+
Sbjct:   25 AAASYQAAVGNELRKYGLRYDDLLNEYDPEVRKTIRTMPPEEAELRAKRLTRAIDVDLKKTQLPDPIQAKQDIWNPYIRSRLGALKQSQLERQ 117          
BLAST of mRNA_Ecto-sp13_S_contig7649.18868.1 vs. uniprot
Match: W7U788_9STRA (Mitochondrial trna import complex n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U788_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 1.250e-15
Identity = 44/98 (44.90%), Postives = 63/98 (64.29%), Query Frame = 0
Query:   14 DVAATQYKRSMTRKLNAFGLKYDDLMIEEDPDVAEAVRRLTPEQQLARKRRQFRAFDISLKKTPLPDHIQAVQDPFEPYLQDIIKEVREERLERELLN 111
            D   + Y + +  +LN +GL+Y DL +E D  V +A+  L+PE+Q+AR+RR  RA +ISLKK  LP  +Q +Q P +PYL   + EV  E  ER+LLN
Sbjct:   46 DGLRSSYTKLVVGELNNYGLRYQDLFLE-DQAVTKAIHHLSPEEQVARERRIKRAIEISLKKKYLPADLQKMQTPLKPYLSHALDEVEAEETERKLLN 142          
BLAST of mRNA_Ecto-sp13_S_contig7649.18868.1 vs. uniprot
Match: A0A7S2TS46_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TS46_9EUKA)

HSP 1 Score: 75.5 bits (184), Expect = 3.050e-15
Identity = 39/93 (41.94%), Postives = 61/93 (65.59%), Query Frame = 0
Query:   18 TQYKRSMTRKLNAFGLKYDDLMIEEDPDVAEAVRRLTPEQQLARKRRQFRAFDISLKKTPLPDHIQAVQDPFEPYLQDIIKEVREERLERELL 110
            T Y+  + + L+ +GL+YDDL+IE DPDV  A+ RL+P ++  R  R  RA D  +K + +P+H+Q  Q P   YL   I++ R+ERLE+++L
Sbjct:   32 TSYRNQLIKDLDKYGLRYDDLLIETDPDVITAISRLSPRERTLRTMRLKRALDCEIKHSYVPEHLQGKQGPHR-YLTPYIEQARKERLEKDIL 123          
BLAST of mRNA_Ecto-sp13_S_contig7649.18868.1 vs. uniprot
Match: A0A7S3LNZ1_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LNZ1_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 3.190e-15
Identity = 41/99 (41.41%), Postives = 66/99 (66.67%), Query Frame = 0
Query:   12 VLDVAATQYKRSMTRKLNAFGLKYDDLMIEEDPDVAEAVRRLTPEQQLARKRRQFRAFDISLKKTPLPDHIQAVQDPFEPYLQDIIKEVREERLERELL 110
            ++   A +Y++ + + L  +GL+Y+D++I E+PDV  A++ + PE+  AR RR  RA D+S K   LP HIQA+Q P + YL + ++E+R+ R ERE L
Sbjct:    6 IIGTVAKKYQKWVHKDLAKYGLRYEDVIIYENPDVQRALKYIPPEEVEARNRRIRRALDLSFKHKELPKHIQAIQAPGKFYLDETMEEMRKLRKEREEL 104          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7649.18868.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LK78_ECTSI3.400e-6998.23Ubiquinol cytochrome c reductase subunit QCR7 n=2 ... [more]
A0A7S2FYD9_9STRA2.940e-2148.54Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2GXC5_9STRA3.370e-2047.66Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
F0Y9P6_AURAN1.680e-1851.72Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A7R9U2G2_9STRA1.140e-1644.00Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A4D9D4E8_9STRA1.740e-1645.92Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A1X6NXZ7_PORUM9.750e-1641.94Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
W7U788_9STRA1.250e-1544.90Mitochondrial trna import complex n=1 Tax=Nannochl... [more]
A0A7S2TS46_9EUKA3.050e-1541.94Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A7S3LNZ1_9STRA3.190e-1541.41Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 93..113
NoneNo IPR availablePANTHERPTHR12022:SF0CYTOCHROME B-C1 COMPLEX SUBUNIT 7coord: 5..111
NoneNo IPR availablePRODOMPD008153coord: 31..100
e-value: 4.0E-10
score: 149.0
IPR036544Cytochrome b-c1 complex subunit 7 superfamilyGENE3D1.10.1090.10coord: 5..113
e-value: 3.3E-24
score: 87.0
IPR036544Cytochrome b-c1 complex subunit 7 superfamilySUPERFAMILY8152414 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)coord: 14..110
IPR003197Cytochrome b-c1 complex subunit 7PFAMPF02271UCR_14kDcoord: 15..108
e-value: 5.9E-25
score: 87.2
IPR003197Cytochrome b-c1 complex subunit 7PANTHERPTHR12022UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 14 KD PROTEINcoord: 5..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7649contigEcto-sp13_S_contig7649:1041..4077 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7649.18868.1mRNA_Ecto-sp13_S_contig7649.18868.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7649 1041..4077 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7649.18868.1 ID=prot_Ecto-sp13_S_contig7649.18868.1|Name=mRNA_Ecto-sp13_S_contig7649.18868.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=114bp
MARLLKKAGDFVLDVAATQYKRSMTRKLNAFGLKYDDLMIEEDPDVAEAV
RRLTPEQQLARKRRQFRAFDISLKKTPLPDHIQAVQDPFEPYLQDIIKEV
REERLERELLNQR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036544QCR7_sf
IPR003197QCR7