mRNA_Ecto-sp13_S_contig764.18856.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig764.18856.1
Unique NamemRNA_Ecto-sp13_S_contig764.18856.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig764.18856.1 vs. uniprot
Match: D8LCM9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCM9_ECTSI)

HSP 1 Score: 606 bits (1563), Expect = 1.540e-211
Identity = 298/316 (94.30%), Postives = 303/316 (95.89%), Query Frame = 1
Query:    1 MMACRLTGVLRRGAVTVSALAVVLFLVSHYSKGSRRRPTSPGACGSPPIGDIMFSMEKVRTYAGPRMEIRTTPPNAEPSSAFPPPAAEETCERWAVLASADEPTDAVKQLAELGEWCVVVVGDKDGPTEYNVAGVVFLTTSDQEALPYRITDLIPWNHPGRKNIGYLYAIHHGAKVIYDVDDAYVLMRPEEGVPFAETSSAEHELSFFSRPSTGVHNPYPCFGGAGVVWPRGFPPAKIRDKGSSMCGVVMGGGGAGEQRVGVVQALADNNPDVDALYRMTCAPGGSRLSFIEESPPLPGSSLRLVPAWTFSPYNAK 948
            MMACRLTGVLRRGA TVSALAVVLFLVSHYSK SRRRPTSPGACGSPPIGDIMFSMEKVRTYAGPRMEIRTTPP+ EPSS FPPPAAE+TCERWAVLASADEPTDAVKQLAELGEWCVVVVGDKDGPTEYNV GVV LT SDQEALPYRITDLIPWNH GRKNIGYLYAIHHGAKVIYDVDDA+VLMRPEEGVPFAETSSAEHELSFFSRPST VHNPYPCFG +GVVWPRGFPPAKIRDK SSMCGVVMGGGGAGEQRVGVVQALADNNPDVDALYRMTCAP GS LSF+EESPPLPGSSLRLVPAWTFSPYNAK
Sbjct:    1 MMACRLTGVLRRGAATVSALAVVLFLVSHYSKRSRRRPTSPGACGSPPIGDIMFSMEKVRTYAGPRMEIRTTPPSVEPSSLFPPPAAEDTCERWAVLASADEPTDAVKQLAELGEWCVVVVGDKDGPTEYNVVGVVLLTPSDQEALPYRITDLIPWNHVGRKNIGYLYAIHHGAKVIYDVDDAHVLMRPEEGVPFAETSSAEHELSFFSRPSTCVHNPYPCFGASGVVWPRGFPPAKIRDKSSSMCGVVMGGGGAGEQRVGVVQALADNNPDVDALYRMTCAPRGSPLSFVEESPPLPGSSLRLVPAWTFSPYNAK 316          
BLAST of mRNA_Ecto-sp13_S_contig764.18856.1 vs. uniprot
Match: A0A6H5JQ39_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ39_9PHAE)

HSP 1 Score: 291 bits (746), Expect = 2.770e-89
Identity = 158/283 (55.83%), Postives = 193/283 (68.20%), Query Frame = 1
Query:  115 TSPGACGSPPIGDIMFSMEKVRTYAGPRMEIRTTPPNAEPSSAFPPPAAEETCERWAVLASADEPTDAVKQLAELGEWCVVVVGDKDGPTEYNVAGVVFLTTSDQEALPYRITDLIPWNHPGRKNIGYLYAIHHGAKVIYDVDDAYVLMRPEEGVPFAETSSAEHE-LSFFS-RPSTGVHNPYPCFGGAGVVWPRGFPPAKIRDKG---SSMCGVVMGGGGAGEQRVGVVQALADNNPDVDALYRMTCAPGGSRLSFIEESPPLPGSSLRLVPAWTFSPYNAK 948
            T PG   S   G  +F+ME++RT+ GPR++      +A      PPPA EE CE+WAVL S  EPT+ VKQLAEL  WCVVVVGDK+GP EY+V GV +LT  DQ+ALPYRIT+++PWNH GRKN+GY+YAI HGAKVIYDVDD   L+ PEEGVP A  SS E   LS FS  PS+ VHNPY CFG  GV WPRG+P   I+D     ++ C V     G    R+GVVQALA+++PDVDA+YR+T  PGG   SF   +P  P S+LR VPA   +PYNA+
Sbjct:   34 TVPGGFESSATGGKVFAMEQIRTFEGPRVDF-----DAAEILPGPPPADEEMCEKWAVLTSIFEPTETVKQLAELRGWCVVVVGDKNGPAEYHVTGVKYLTPGDQDALPYRITEILPWNHFGRKNVGYMYAIQHGAKVIYDVDDDNALIHPEEGVPHAGVSSIEDNVLSRFSGHPSSSVHNPYGCFGAPGVSWPRGYPLPAIQDDSPHHAAYCDV----DGISGSRIGVVQALANHDPDVDAIYRLTHPPGGLPFSFNPGAPGTPESTLRGVPADKMTPYNAQ 307          
BLAST of mRNA_Ecto-sp13_S_contig764.18856.1 vs. uniprot
Match: D7FLI5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLI5_ECTSI)

HSP 1 Score: 268 bits (686), Expect = 2.390e-84
Identity = 148/269 (55.02%), Postives = 173/269 (64.31%), Query Frame = 1
Query:  166 MEKVRTYAGPRMEIRTTPPNAEPSSAFPPPAAEETCERWAVLASADEPTDAVKQLAELGEWCVVVVGDKDGPTEYNVAGVVFLTTSDQEALPYRITDLIPWNHPGRKNIGYLYAIHHGAKVIYDVDDAYVLMRPEEGVPFAETS-SAEHELSFFSRPSTGVHNPYPCFGGAGVVWPRGFPPAKIRDKGSSMCGVVM----GGGGAGEQ--RVGVVQALADNNPDVDALYRMTCAPGGSRLSFIEESPPLPG-SSLRLVPAWTFSPYNAK 948
            MEKVRTY G R+          P + FP P   E CERWAVL S  EPTD V+QL    +WCVVVVGD++GP EYNV GV++LT  DQE LPYRI  L+PWNH GRKNIGYLYA+HHGA VIYDVDD   L+ PE GVP A +  +     SF   P   VHNPY CFGG G VWPRGFP   I D  S+ C  V     G   A E+  R+GVVQALA+++PDVDA+YR+T  PGG    F    P   G SSL++VP   F+PYNA+
Sbjct:    1 MEKVRTYEGARLPA--------PEAMFPAPLDSEKCERWAVLTSIFEPTDTVRQLGAAEDWCVVVVGDQNGPAEYNVEGVIYLTPQDQEQLPYRIVPLLPWNHFGRKNIGYLYAVHHGATVIYDVDDDNALIHPEAGVPHALSPVTPASTTSFAVGPEAFVHNPYGCFGGPGNVWPRGFPLDSINDADSNRCDEVAVDSAGESAAPEEGWRLGVVQALANHDPDVDAVYRLTYPPGGLPFDFEVPDPVPEGMSSLKIVPPAAFTPYNAQ 261          
BLAST of mRNA_Ecto-sp13_S_contig764.18856.1 vs. uniprot
Match: A0A8B7XWL1_ACAPL (probable glycosyltransferase STELLO2 n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7XWL1_ACAPL)

HSP 1 Score: 172 bits (436), Expect = 1.030e-46
Identity = 110/264 (41.67%), Postives = 149/264 (56.44%), Query Frame = 1
Query:  160 FSMEKVRTYAGPRMEIRTTPPNAEPSSAFPPPAAEETCERWAVLASADEPTDAVKQLAELGEWCVVVVGDKDGPTEYNVAGVVFLTTSDQEALPYRITDLIPWNHPGRKNIGYLYAIHHGAKVIYDVDDAYVLMRPEEGVP-FAETSSAEHELSFFSRPSTGVHNPYPCFGGAGVVWPRGFPPAKIRDKGSSMCGVVMGGGGAGEQRVGVVQALADNNPDVDALYRMTCAPGGSRLSFIEESPPLPGSSLRLVPAWTFSPYNAK 948
            + + KVRT+ G R       P+A     F P A  + C+RW V+ +  +PT  + +++ L  WC+VVV DK GP   N+  V +L    QE+  Y++  ++PWNH GRKNIGYLYAI HGAK+IYD DD    + PE  VP F     A +  +        V NPYP FG    VWPRGFP ++I+D+ +    +    G A  Q+VGVVQ LA ++PDVDA+YR+T     S L F  +  P P   +  VP   FSPYNA+
Sbjct:   65 YELRKVRTFEGSRAL-----PSAASCRPFSPNAGRK-CDRWIVVTTIYKPTPILPKISSLKGWCMVVVADKKGPQSMNIPNVDYLDVVQQESCGYKLCRVVPWNHFGRKNIGYLYAIEHGAKLIYDTDDDNAPLFPE--VPAFDNVGYARYVTA-----GGAVWNPYPTFGQNTKVWPRGFPLSRIKDQSTK---IAAESGKALPQQVGVVQFLAQHDPDVDAIYRLT-----SELPF--DFNPTPRRLV--VPKRMFSPYNAQ 303          
BLAST of mRNA_Ecto-sp13_S_contig764.18856.1 vs. uniprot
Match: UPI0014553AFF (probable glycosyltransferase STELLO2 n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI0014553AFF)

HSP 1 Score: 169 bits (427), Expect = 1.780e-45
Identity = 97/229 (42.36%), Postives = 136/229 (59.39%), Query Frame = 1
Query:  157 MFSMEKVRTYAGPRMEIRTTPPNAEPSSAFPPPAAE-ETCERWAVLASADEPTDAVKQLAELGEWCVVVVGDKDGPTEYNVAGVVFLTTSDQEALPYRITDLIPWNHPGRKNIGYLYAIHHGAKVIYDVDDAYVLMRPEEGVPFAETSSAEHELSFFSRPSTGVHNPYPCFGGAGVVWPRGFPPAKIRDKGSSMCGVVMGGGGAGEQRVGVVQALADNNPDVDALYRMT 840
            +  +EK+RT+ G R        + EP+ ++ P  ++ + C+RW V+ +  EPT  +K L     WC+VVV DK GP   ++  +V LT ++Q+   YRI  LIPWNH  RKNIGY+YAI HGAKVIYD DD   L+   + +P  E   A+H      +  + V NPYP FG +  +WPRGFP  +I D  +    +V   G A  + +GVVQ LA ++PDVDA+YRMT
Sbjct:   56 VHKLEKIRTFHGKR--------SVEPAGSYTPSWSQNKQCDRWIVVTTIFEPTGIMKTLGATSGWCMVVVADKKGPVSMDIPNIVHLTVAEQKNCRYRICQLIPWNHFSRKNIGYMYAIEHGAKVIYDTDDDNGLLA--DLMPDFEVHFAQHV-----KLDSYVWNPYPEFGPSTHIWPRGFPLNRITDDTTKSLTLV---GAAKGEDIGVVQYLAQHDPDVDAIYRMT 266          
BLAST of mRNA_Ecto-sp13_S_contig764.18856.1 vs. uniprot
Match: A0A7S3S1Z0_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3S1Z0_EMIHU)

HSP 1 Score: 164 bits (415), Expect = 1.640e-44
Identity = 106/282 (37.59%), Postives = 147/282 (52.13%), Query Frame = 1
Query:   34 RGAVTVSALAVVLFLVSHYSKGSRRRPTSPGACG--------SPPIGDIMFSMEKVRTYAGPRMEIRTTP-PNAEPSSAFPPPAAEETCERWAVLASADEPTDAVKQLAELGEWCVVVVGDKDGPTEYNVAGVVFLTTSDQEALPYRITDLIPWNHPGRKNIGYLYAIHHGAKVIYDVDDAYVLMRP-EEGVPFAETSSAEHELSFFSRPSTGVHNPYPCFGGAGV---VWPRGFPPAKIRDKGSSMCGVVMGGGGAGEQRVGVVQALADNNPDVDALYRMT 840
            RG  + + LA    LV  +    R+ P  PG  G        S      +F   KVR+Y GPR      P P+A+        A  + C +WAV+ S   PT  V+QLA L  WCVVV GDK GP EYN++GV++LT + QEALP+     + WNH GRKN+G+LYAI HGA+ +YD DD   L+ P    +P     +   E+   +R     H+     G A +    WPRGFP   I+D  ++          +  +R+GV Q+LA+ +PDVD +YR+T
Sbjct:    8 RGCASGAGLATACALVLAFLAW-RQLPAQPGQTGGSWGSNGISESSSGALFRAVKVRSYQGPRRFADWRPRPDAKKG------APSKECRQWAVVTSIFPPTQTVRQLAALPSWCVVVAGDKKGPVEYNLSGVLYLTPAMQEALPFESKAELRWNHFGRKNLGFLYAIQHGARWVYDTDDDNELLFPGPRAIPIPPPDALADEVYTSARLYNLYHHLAVLPGKAHLPWRTWPRGFPLESIKDNATTSAAFRRRAWPS--RRIGVFQSLANRDPDVDGIYRLT 280          
BLAST of mRNA_Ecto-sp13_S_contig764.18856.1 vs. uniprot
Match: W7TUS0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TUS0_9STRA)

HSP 1 Score: 171 bits (434), Expect = 1.950e-44
Identity = 117/287 (40.77%), Postives = 153/287 (53.31%), Query Frame = 1
Query:  148 GDIMFSMEKVRTYAGPRMEIRTTPPNAEPSSAFPPPAAEETCERWAVLASADEPTDAVKQLAELGEWCVVVVGDKDGPTEYNVAG--VVFLTTSDQEALPYRITDLIPWNHPGRKNIGYLYAIHHGAKVIYDVDDAYVLMRPEEGVPFA-ETSSAEHELS--FFSRPSTGVHNPYPCFGGAGV-------VWPRGFPPAKIRDKGSSMCGVVMG------GGGAGEQRVGVVQALADNNPDVDALYRMTCAPGGSRLSFIEESPPLPGSSLRL--VPAWTFSPYNAK 948
            G  +F   K RTY G R        +      +P  A + TC +WAV+ +   PT  VKQL E+ +WCVVVVGD+  P+ Y++    ++FL   +QEALPY I  L+ WNH GRKNIG+LYA+ HGA+VIYD DD  +L     G PF  +    E  LS        + V+NPYP FG   V       VWPRGFP   I D  +S   V +G       GG     + +VQ+LAD++PDVDALYR+T     S L     S    G S RL  +P    +P+NA+
Sbjct:   65 GGHVFVAAKRRTYHGSRPFSSNISTSGVSHKPYPRSAEQLTCNKWAVVTTIFGPTALVKQLVEMKDWCVVVVGDQQSPSTYDIQSDNLIFLGPEEQEALPYHIIPLLKWNHFGRKNIGFLYAMQHGAEVIYDTDDDNILKVDSRGKPFIPDCKLGELALSKDVVRSGQSQVYNPYPNFGSVRVKDGSPAFVWPRGFPVDLITD--ASTWNVSLGVEEETLEGGV----ITIVQSLADHDPDVDALYRLT-----SHLPLRFHS----GGSARLEVIPPGVMTPFNAQ 336          
BLAST of mRNA_Ecto-sp13_S_contig764.18856.1 vs. uniprot
Match: UPI0018D5FB2F (probable glycosyltransferase STELLO1 n=2 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D5FB2F)

HSP 1 Score: 165 bits (418), Expect = 8.390e-44
Identity = 106/284 (37.32%), Postives = 147/284 (51.76%), Query Frame = 1
Query:  103 RRRPTSPGACGSPPIGDIMFSMEKVRTYAGPRMEIRTTPPNAEPSSAFPPPAAEETCERWAVLASADEPTDAVKQLAELGEWCVVVVGDKDGPTEYNVAGVVFLTTSDQEALPYRITDLIPWNHPGRKNIGYLYAIHHGAKVIYDVDDAYVLMRPEEGVPFAETSSAEHELSFFSRPSTGVH--NPYPCFGGAGVVWPRGFPPAKIRDKGSSMCGVVMGGGGAGEQRVGVVQALADNNPDVDALYRMTCAPGGSRLSFIEESPPLPGSSLRLVPAWTFSPYNAK 948
            R  P   GA G       ++ + K RTY G R     T  + +P SA     A   C+RW V+ +    T  +++++ L  WC+VVV DK GP   ++  V +L    QE+  Y+I  L+PWNH GRKNIGYLYAI HGA++IYD DD        +  P  +   A   + +  +     H  NPYP FG    +WPRGFP ++I D  +    V+ G   A  +R GVVQ LA ++PD+DA+YR+T     + L +  E  P P      VP    SPYNA+
Sbjct:   63 RPSPHIQGATGR------VYQLSKARTYEGRRELAPATSTSCKPYSAR----AGRRCDRWIVVTTIHPSTPILRKISSLSGWCMVVVADKKGPVSMDIPNVDYLDVVQQESCGYQICRLLPWNHFGRKNIGYLYAIEHGAEMIYDTDD--------DNQPLFDELPAFDNVGYSKQLHVAGHLWNPYPQFGANTKMWPRGFPLSRITDPATKRVDVINGTVAA--RRAGVVQFLAQHDPDIDAIYRLT-----NELPY--EFDPAPRRLF--VPERVMSPYNAQ 317          
BLAST of mRNA_Ecto-sp13_S_contig764.18856.1 vs. uniprot
Match: W7SZI8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7SZI8_9STRA)

HSP 1 Score: 166 bits (419), Expect = 2.180e-42
Identity = 102/245 (41.63%), Postives = 139/245 (56.73%), Query Frame = 1
Query:  148 GDIMFSMEKVRTYAGPRMEIRTTPPNAEPSSAFPPPAAEETCERWAVLASADEPTDAVKQLAELGEWCVVVVGDKDGPTEYNVAG--VVFLTTSDQEALPYRITDLIPWNHPGRKNIGYLYAIHHGAKVIYDVDDAYVLMRPEEGVPFA-ETSSAEHELS--FFSRPSTGVHNPYPCF-------GGAGVVWPRGFPPAKIRDKGSSMCGVVMGGGGAGEQR--VGVVQALADNNPDVDALYRMT 840
            G  +F   K R+Y G R     T  +    + +P  A +  C +WAV+ +   PT  V+QL  + +WCVVVVGDK  P+ Y++    +++L+  +QEALPY+I  L+ WNH GRKNIG+LYA+HHGA+VIYD DD  +L     G PF  + S  E  LS        + V+NPYP F       G    VWPRGFP   I D  +S   V  G      +   + +VQ+LAD++PDVDALYR+T
Sbjct:   65 GGQVFVAIKRRSYHGHRPFSSNTSTSGFSDNLYPRRAEQLLCNKWAVVTTIFGPTTLVRQLVGMKDWCVVVVGDKKSPSTYDIQSDTLIYLSPEEQEALPYQIIPLLKWNHFGRKNIGFLYAMHHGAEVIYDTDDDNILKVDSRGNPFIPDCSLGELALSKDVVRLGQSHVYNPYPSFESVHVKDGSHAFVWPRGFPVDLITD--TSTWNVSRGKEEEAHEGGIITIVQSLADHDPDVDALYRLT 307          
BLAST of mRNA_Ecto-sp13_S_contig764.18856.1 vs. uniprot
Match: UPI0018D8F1E1 (probable glycosyltransferase STELLO1 n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D8F1E1)

HSP 1 Score: 161 bits (407), Expect = 2.700e-42
Identity = 101/266 (37.97%), Postives = 140/266 (52.63%), Query Frame = 1
Query:  157 MFSMEKVRTYAGPRMEIRTTPPNAEPSSAFPPPAAEETCERWAVLASADEPTDAVKQLAELGEWCVVVVGDKDGPTEYNVAGVVFLTTSDQEALPYRITDLIPWNHPGRKNIGYLYAIHHGAKVIYDVDDAYVLMRPEEGVPFAETSSAEHELSFFSRPSTGVH--NPYPCFGGAGVVWPRGFPPAKIRDKGSSMCGVVMGGGGAGEQRVGVVQALADNNPDVDALYRMTCAPGGSRLSFIEESPPLPGSSLRLVPAWTFSPYNAK 948
            ++ + K RTY G R     T  + +P SA     A   C RW V+ +    T  +++++ L  WC+VVV DK GP   ++  V +L    QE+  Y+I  L+PWNH GRKNIGYLYAI HGA++IYD DD        +  P  +   A   + +  +     H  NPYP FG    +WPRGFP ++I D  +    V  G   A  +R GVVQ LA ++PD+DA+YR+T     + L +  E  P P      VP    SPYNA+
Sbjct:   64 VYQLSKARTYEGRRELAPATSISCKPYSAR----AGRRCGRWIVVTTIHPSTPILRKISSLSGWCMVVVADKKGPVTMDIPNVDYLDVVQQESCGYQICRLLPWNHFGRKNIGYLYAIEHGAEMIYDTDD--------DNQPLFDELPAFDNVGYSKQLHVAGHLWNPYPQFGANTKMWPRGFPLSRIMDPATKRVNVSSGTVAA--RRAGVVQFLAQHDPDIDAIYRLT-----NELPY--EFDPAPRRLF--VPERVMSPYNAQ 306          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig764.18856.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCM9_ECTSI1.540e-21194.30Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JQ39_9PHAE2.770e-8955.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FLI5_ECTSI2.390e-8455.02Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A8B7XWL1_ACAPL1.030e-4641.67probable glycosyltransferase STELLO2 n=1 Tax=Acant... [more]
UPI0014553AFF1.780e-4542.36probable glycosyltransferase STELLO2 n=1 Tax=Aster... [more]
A0A7S3S1Z0_EMIHU1.640e-4437.59Hypothetical protein (Fragment) n=1 Tax=Emiliania ... [more]
W7TUS0_9STRA1.950e-4440.77Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
UPI0018D5FB2F8.390e-4437.32probable glycosyltransferase STELLO1 n=2 Tax=Patir... [more]
W7SZI8_9STRA2.180e-4241.63Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
UPI0018D8F1E12.700e-4237.97probable glycosyltransferase STELLO1 n=1 Tax=Patir... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig764contigEcto-sp13_S_contig764:11187..13737 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score612.8
Seed ortholog evalue8.7e-173
Seed eggNOG ortholog2880.D8LCM9
Model size949
Hectar predicted targeting categorysignal peptide
GOsGO:0000271,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005794,GO:0005802,GO:0005975,GO:0005976,GO:0006073,GO:0006109,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009250,GO:0009664,GO:0009832,GO:0009889,GO:0009987,GO:0010383,GO:0010556,GO:0010675,GO:0010962,GO:0010981,GO:0012505,GO:0016043,GO:0016051,GO:0019222,GO:0030243,GO:0030244,GO:0030312,GO:0031323,GO:0031326,GO:0031410,GO:0031982,GO:0031984,GO:0032881,GO:0032885,GO:0032950,GO:0032951,GO:0033692,GO:0034637,GO:0034645,GO:0042546,GO:0042802,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043255,GO:0044036,GO:0044038,GO:0044042,GO:0044085,GO:0044087,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044422,GO:0044424,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0045229,GO:0050789,GO:0050794,GO:0051128,GO:0051273,GO:0051274,GO:0052324,GO:0052541,GO:0060255,GO:0065007,GO:0070589,GO:0070592,GO:0071554,GO:0071555,GO:0071669,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0097708,GO:0098791,GO:1901576,GO:1903338,GO:2000112,GO:2001006,GO:2001009
Exons3
EggNOG free text desc.plant-type cell wall cellulose biosynthetic process
EggNOG OGs28KU8@1,2QTAG@2759
Ec32 ortholog descriptionGlycosyl transferase, family 31
Ec32 orthologEc-03_002280.1
Cds size948
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464034.1836288-CDS-Ecto-sp13_S_contig764:11186..116091681464034.1836288-CDS-Ecto-sp13_S_contig764:11186..11609Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig764 11187..11609 -
1681464034.194362-CDS-Ecto-sp13_S_contig764:12127..122761681464034.194362-CDS-Ecto-sp13_S_contig764:12127..12276Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig764 12128..12276 -
1681464034.2031887-CDS-Ecto-sp13_S_contig764:13361..137371681464034.2031887-CDS-Ecto-sp13_S_contig764:13361..13737Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig764 13362..13737 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig764.18856.1prot_Ecto-sp13_S_contig764.18856.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig764 11187..13737 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig764.18856.1

>prot_Ecto-sp13_S_contig764.18856.1 ID=prot_Ecto-sp13_S_contig764.18856.1|Name=mRNA_Ecto-sp13_S_contig764.18856.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=316bp
MMACRLTGVLRRGAVTVSALAVVLFLVSHYSKGSRRRPTSPGACGSPPIG
DIMFSMEKVRTYAGPRMEIRTTPPNAEPSSAFPPPAAEETCERWAVLASA
DEPTDAVKQLAELGEWCVVVVGDKDGPTEYNVAGVVFLTTSDQEALPYRI
TDLIPWNHPGRKNIGYLYAIHHGAKVIYDVDDAYVLMRPEEGVPFAETSS
AEHELSFFSRPSTGVHNPYPCFGGAGVVWPRGFPPAKIRDKGSSMCGVVM
GGGGAGEQRVGVVQALADNNPDVDALYRMTCAPGGSRLSFIEESPPLPGS
SLRLVPAWTFSPYNAK
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mRNA from alignment at Ecto-sp13_S_contig764:11187..13737-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig764.18856.1 ID=mRNA_Ecto-sp13_S_contig764.18856.1|Name=mRNA_Ecto-sp13_S_contig764.18856.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2551bp|location=Sequence derived from alignment at Ecto-sp13_S_contig764:11187..13737- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGATGGCTTGCCGGCTGACAGGCGTGCTTCGCCGAGGCGCAGTAACGGT TTCCGCTCTGGCCGTCGTCTTGTTCCTCGTCTCTCATTACTCCAAGGGGA GCCGACGACGACCTACGTCTCCAGGCGCGTGCGGATCGCCCCCCATCGGC GACATCATGTTCTCCATGGAAAAGGTTCGAACTTACGCCGGGCCAAGAAT GGAAATCAGGACAACGCCCCCAAACGCCGAACCATCCTCTGCGTTCCCGC CGCCAGCTGCGGAAGAGACGTGCGAGAGGTGGGCGGTGCTGGCGTCCGCA GACGAGCCGACCGACGCGGTGAAGCAGCTAGCAGAGCTGGGCGAGTGGTG TGTAGTGGTTGTCGGCGACAAAGACGGTGAGAGTTTGTGCGGGAGGTATC TACCGAGTGCGTACCGGCTGCATGGCATGGGTGGGTCGCATGGCACATGA GTGGCCGTTCGATTTTTTTGGTGACGCAGAGATACGACATTGGTTTTCCG GCAAGCCACCTGAATCTAAAGCGGCGGGTAGTCGGGGAAGTACAGGGTTC TTCGGATGGACGGCCGCATTGCTCAGAGCTTGTGCACTCTCTTGTCTTGA TTTGTCGCCGACCTCATGGGGTTACGGCCAGCGGCTAGTTCCCCCACATC AAAGCGATGTGCTTTTGGTAAATACCTCTCTGACCACCCCATTCGCTTGC TGATTCATTGTCTCTTCGTTCGGACATATCGGAGAAACGGGAGTTGAATG CTCAGGCTGCTAGGATTGCTCAAGTAGTCGCAGGCACCTGTACGGGATCT CTCGTATTTCAGATTCGCAGTTCTCGTGTCACTCTTGCATGCTAGGTCCT AACCACCCAATGTCAAGAGTCGAACATCGTCGATCAGTAGGAATTCGGTT TTTGCGAGTCAGCTCATTGGCACGCGTTCCGAGAGAGAGTAAATAGGCGA GGTACGCATTTGTATCTCTGGAATAGGTTGGCTTCTGGCGACCAGCGTTA TCAAAGTTGTTCTTTCGGTGAATGTTTTTACTACTACGGTGAGACGTGCG CCGGCACCTTCGCCCACCATTGTAAGCCAATGCCCCGGCGGCGAAGCTGT AAGCCTACATGTCGAGCTTCAGCGCTTCGTTCGTAGGTTTGGACGCCAAA TTTCGTTCCGGTCCTTTCGATGCCTGCCAATCGCTTGGAGACAACGAGGT CACTATGAGCCAGTGAATGGTAGTAGAAGGAACCTGTTGCACGGTATGAA CGCAAAACACTAGAGTGCTGCGGAGTACGTGGTGCTGCTCCTTGTGCACA CAGCCCGAACCTGGGAAAATCGTCGATAGGAGACCCTCAAGATGGAGCAA CCATTTTACACGGTATGTCTTGTGGACGACATCCTGGACCAAACTACCGC ACGACATTTTTTCTCAAGTTTTCGATGCCATCCTGCTTCCCGCCGAATTC CTCGTCGTCAGGACCCACGGAGTACAACGTCGCGGGAGTGGTATTCCTGA CCACAAGCGACCAAGAGGCGTTGCCCTATCGCATCACGGACCTGATTCCG TGGAACCACCCTGGCCGTAAGAACATCGGATACTTGTACGCCATTCATCA CGGGGCGAAGGTCAGTGAGAAATGGTGAATGGTGGTGCCGGCCGCCAATC CTTCCCATACTGCTGCCTTCTCGCGGGACTAGTACATCTTCGGTGCCAGC GCGTGGGACTTGAATATCACATGGACGTGGAGAGAAGTTGGCAGATGGTG TCAAAGGTCCAGTGGCGAGTTACTTGAAGTGAGGACAATGCACGTATTTC GTGCTACCGACCCTGCAGCTACATGAAATCGTGTTCACAGGCGCAGCAAT TACAAATATTTTATGGTCAAAGTTGAATCCTCTCTCACCCCCACGAAATG AATCGTGGTTTCGAACCGTTTTTGTACGGGGTCGAGTCCGAAACAATCAT TGCTGCAGCAGTACGTGAATGCATGTCGTCTTGTGTGTGTGTGTAGCACG GCGTAGGGCTACGAGCGTGATATTGTGCTCAAACTCGCGGCTGCACCACA GAGGCACGACATCAGCTCAACTCACGGCCTAACGACGCGGAACGAAGCGT GTCTGAAACGTCCGCACTTAAACGACAGGTAATCTACGATGTGGACGACG CTTACGTTCTCATGCGCCCGGAAGAAGGCGTGCCTTTCGCGGAAACTTCG TCTGCCGAGCACGAGCTATCGTTCTTTTCGAGGCCCTCCACCGGCGTGCA CAACCCCTACCCTTGCTTCGGCGGTGCCGGGGTCGTCTGGCCCCGAGGGT TTCCCCCCGCCAAGATCCGAGACAAGGGTTCGTCGATGTGCGGCGTGGTC ATGGGCGGCGGCGGGGCCGGCGAGCAGCGCGTCGGTGTGGTGCAAGCCCT CGCCGACAACAACCCGGATGTTGACGCGCTCTACCGCATGACGTGCGCGC CGGGAGGATCGCGGCTGAGCTTCATCGAGGAGTCTCCACCCCTGCCGGGA AGCTCGCTGCGCCTAGTCCCCGCCTGGACCTTTTCACCGTACAACGCAAA G
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig764:11187..13737-

>mRNA_Ecto-sp13_S_contig764.18856.1 ID=mRNA_Ecto-sp13_S_contig764.18856.1|Name=mRNA_Ecto-sp13_S_contig764.18856.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=948bp|location=Sequence derived from alignment at Ecto-sp13_S_contig764:11187..13737- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGATGGCTTGCCGGCTGACAGGCGTGCTTCGCCGAGGCGCAGTAACGGT
TTCCGCTCTGGCCGTCGTCTTGTTCCTCGTCTCTCATTACTCCAAGGGGA
GCCGACGACGACCTACGTCTCCAGGCGCGTGCGGATCGCCCCCCATCGGC
GACATCATGTTCTCCATGGAAAAGGTTCGAACTTACGCCGGGCCAAGAAT
GGAAATCAGGACAACGCCCCCAAACGCCGAACCATCCTCTGCGTTCCCGC
CGCCAGCTGCGGAAGAGACGTGCGAGAGGTGGGCGGTGCTGGCGTCCGCA
GACGAGCCGACCGACGCGGTGAAGCAGCTAGCAGAGCTGGGCGAGTGGTG
TGTAGTGGTTGTCGGCGACAAAGACGGACCCACGGAGTACAACGTCGCGG
GAGTGGTATTCCTGACCACAAGCGACCAAGAGGCGTTGCCCTATCGCATC
ACGGACCTGATTCCGTGGAACCACCCTGGCCGTAAGAACATCGGATACTT
GTACGCCATTCATCACGGGGCGAAGGTAATCTACGATGTGGACGACGCTT
ACGTTCTCATGCGCCCGGAAGAAGGCGTGCCTTTCGCGGAAACTTCGTCT
GCCGAGCACGAGCTATCGTTCTTTTCGAGGCCCTCCACCGGCGTGCACAA
CCCCTACCCTTGCTTCGGCGGTGCCGGGGTCGTCTGGCCCCGAGGGTTTC
CCCCCGCCAAGATCCGAGACAAGGGTTCGTCGATGTGCGGCGTGGTCATG
GGCGGCGGCGGGGCCGGCGAGCAGCGCGTCGGTGTGGTGCAAGCCCTCGC
CGACAACAACCCGGATGTTGACGCGCTCTACCGCATGACGTGCGCGCCGG
GAGGATCGCGGCTGAGCTTCATCGAGGAGTCTCCACCCCTGCCGGGAAGC
TCGCTGCGCCTAGTCCCCGCCTGGACCTTTTCACCGTACAACGCAAAG
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