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Homology
BLAST of mRNA_Ecto-sp13_S_contig7616.18823.1 vs. uniprot
Match: A0A6H5JS60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS60_9PHAE) HSP 1 Score: 393 bits (1009), Expect = 2.250e-131 Identity = 210/224 (93.75%), Postives = 214/224 (95.54%), Query Frame = 3
Query: 3 GRCPARQRVLPSMSLGEAASSRGEYVKTVLGGGALGLATVYFPALSKRAEAAAQSLEELEADIMICKEVFKPTLKYLKAEQFDAARTNTNYITRFFNLKKKIDSFIVQASDVVDDPDT---MEKAFDMAQEVEALFTNFDSSVYTIIFIPADADGVLPPGAEKYLKQAYGFYDDINKVLDFYIDLVPPETKAAAEKLLPAKRAPLPGFLFKEKSTLMKEKVAIS 665
GRCPARQ VLPSM L A SSRGEYVKTVLGGGALGLAT + PALSKRAEAAAQSLEELEADIMICKEVFKPTL+YLKAEQFDAARTNTNYITRFFNLKKKIDSFIVQASDVVDDPDT +EKAFDMAQEVEALFTNFDSSVYTIIFIPADA+GVLPPGAEKYLKQAYGFYDDINKVLDFYIDLVPPETKAAAEKLLPAKRAPLPGFLFKEKSTLMKEKVAIS
Sbjct: 49 GRCPARQHVLPSMLL--AGSSRGEYVKTVLGGGALGLATAFSPALSKRAEAAAQSLEELEADIMICKEVFKPTLQYLKAEQFDAARTNTNYITRFFNLKKKIDSFIVQASDVVDDPDTASFIEKAFDMAQEVEALFTNFDSSVYTIIFIPADAEGVLPPGAEKYLKQAYGFYDDINKVLDFYIDLVPPETKAAAEKLLPAKRAPLPGFLFKEKSTLMKEKVAIS 270
BLAST of mRNA_Ecto-sp13_S_contig7616.18823.1 vs. uniprot
Match: D7FL66_ECTSI (TPT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL66_ECTSI) HSP 1 Score: 397 bits (1019), Expect = 7.310e-127 Identity = 212/229 (92.58%), Postives = 218/229 (95.20%), Query Frame = 3
Query: 3 GRCPARQRVLPSMSLGEAASSRGEYVKTVLGGGALGLATVYFPALSKRAEAAAQSLEELEADIMICKEVFKPTLKYLKAEQFDAARTNTNYITRFFNLKKKIDSFIVQASDVVDDPDTMEKAFDMAQEVEALFTNFDSSVYTIIFIPADADGVLPPGAEKYLKQAYGFYDDINKVLDFYIDLVPPETKAAAEKLLPAKRAPLPGFLFKEKSTLMKEKVAIS*RMQGNLV 689
GRCPA QRVLPSMSL A SSRGEYVKTVLGGGALGLAT + PALSKRAEAAAQSLEELEADIMICKEVFKPTL+YLKAEQFDAARTNTNYITRFFNLKKKIDSFIVQASDVV+DPDTMEKAFDMAQEVEALFTNFDSSVYTIIFIPADADGVLPPGAEKYLKQAYGFYDDINKVLDFYIDLVPPETKAAAEKLLPAKRAPLP FLFKEKSTLMKEK A S ++Q NL+
Sbjct: 51 GRCPAPQRVLPSMSL--AGSSRGEYVKTVLGGGALGLATAFSPALSKRAEAAAQSLEELEADIMICKEVFKPTLQYLKAEQFDAARTNTNYITRFFNLKKKIDSFIVQASDVVEDPDTMEKAFDMAQEVEALFTNFDSSVYTIIFIPADADGVLPPGAEKYLKQAYGFYDDINKVLDFYIDLVPPETKAAAEKLLPAKRAPLPSFLFKEKSTLMKEKCA-SRKVQVNLI 276
BLAST of mRNA_Ecto-sp13_S_contig7616.18823.1 vs. uniprot
Match: A0A835YWX6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWX6_9STRA) HSP 1 Score: 148 bits (373), Expect = 7.850e-38 Identity = 80/195 (41.03%), Postives = 116/195 (59.49%), Query Frame = 3
Query: 45 LGEAASSRGEYVKTVLGGGALGLATVYFPALSKRAEAAAQSLEELEADIMICKEVFKPTLKYLKAEQFDAARTNTNYITRFFNLKKKIDSFIVQASDVVDDPDTMEKAFDMAQEVEALFTNFDSSVYTIIFIPADADGVLPPGAEKYLKQAYGFYDDINKVLDFYIDLVPPETKAAAEKLLPAKRAPLPGFLFKE 629
+GEA+ SR + +V+ GGA T + +A A Q+ E+ A +M+CK V +P+ KY K QFD+ARTN NYITR ++K I I++ + DD +E+A D+A ++ F+N+DSS+YT+IFIP DG LP G++KY QA +YD +LD +I L P + + A A+ LP FLFKE
Sbjct: 1 MGEASVSRRSFTSSVVLGGAAAAFTAWTHPKVAQAAAPEQTFEDAVATLMVCKAVLEPSHKYFKLNQFDSARTNVNYITRQLGVRKAIGKVIIEGGAICDDEALVEEASDLAATADSTFSNYDSSIYTVIFIPPGEDGSLPKGSDKYFNQADVYYDQSVHMLDVFISLAPEDVRERARAKAEARVKELPRFLFKE 195
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Stop | 1 |
| Start | 1 |
| Seed ortholog score | 379.0 |
| Seed ortholog evalue | 1.4e-102 |
| Seed eggNOG ortholog | 2880.D7FL66 |
| Model size | 1689 |
| KEGG ko | ko:K15280 |
| KEGG TC | 2.A.7 |
| Hectar predicted targeting category | other localisation |
| Exons | 5 |
| EggNOG free text desc. | UDP-glucose transmembrane transport |
| EggNOG OGs | COG0697@1,KOG1443@2759 |
| Cds size | 630 |
| COG Functional cat. | EG |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko02000 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1681464031.1096766-UTR-Ecto-sp13_S_contig7616:1..39 | 1681464031.1096766-UTR-Ecto-sp13_S_contig7616:1..39 | Ectocarpus species13 EcNAP12_S_4_19m | UTR | Ecto-sp13_S_contig7616 2..39 + |
| 1681464031.1933243-UTR-Ecto-sp13_S_contig7616:4417..5438 | 1681464031.1933243-UTR-Ecto-sp13_S_contig7616:4417..5438 | Ectocarpus species13 EcNAP12_S_4_19m | UTR | Ecto-sp13_S_contig7616 4418..5438 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1681464031.1217406-CDS-Ecto-sp13_S_contig7616:39..55 | 1681464031.1217406-CDS-Ecto-sp13_S_contig7616:39..55 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig7616 40..55 + |
| 1681464031.1412845-CDS-Ecto-sp13_S_contig7616:1517..1666 | 1681464031.1412845-CDS-Ecto-sp13_S_contig7616:1517..1666 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig7616 1518..1666 + |
| 1681464031.154896-CDS-Ecto-sp13_S_contig7616:2665..2818 | 1681464031.154896-CDS-Ecto-sp13_S_contig7616:2665..2818 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig7616 2666..2818 + |
| 1681464031.1685443-CDS-Ecto-sp13_S_contig7616:3312..3450 | 1681464031.1685443-CDS-Ecto-sp13_S_contig7616:3312..3450 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig7616 3313..3450 + |
| 1681464031.182424-CDS-Ecto-sp13_S_contig7616:4243..4417 | 1681464031.182424-CDS-Ecto-sp13_S_contig7616:4243..4417 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig7616 4244..4417 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7616.18823.1 >prot_Ecto-sp13_S_contig7616.18823.1 ID=prot_Ecto-sp13_S_contig7616.18823.1|Name=mRNA_Ecto-sp13_S_contig7616.18823.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=210bp
MSLGEAASSRGEYVKTVLGGGALGLATVYFPALSKRAEAAAQSLEELEAD IMICKEVFKPTLKYLKAEQFDAARTNTNYITRFFNLKKKIDSFIVQASDV VDDPDTMEKAFDMAQEVEALFTNFDSSVYTIIFIPADADGVLPPGAEKYL KQAYGFYDDINKVLDFYIDLVPPETKAAAEKLLPAKRAPLPGFLFKEKST LMKEKVAIS* back to topmRNA from alignment at Ecto-sp13_S_contig7616:2..5438+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp13_S_contig7616.18823.1 ID=mRNA_Ecto-sp13_S_contig7616.18823.1|Name=mRNA_Ecto-sp13_S_contig7616.18823.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5437bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7616:2..5438+ (Ectocarpus species13 EcNAP12_S_4_19m) CTGGGCGATGTCCCGCGCGGCAACGTGTGCTACCGTCCATGTCACTTGGT
GAAGGTCAGACCAACTTAGTTGCACCTCTTCACAAATTTCGCCAGATGTT
TTGTCTGTGTTCTTTGTTTGGGTGTAAGTGCTGTAGCTGTGTATGTGTCC
GAGTCCACTATCTCGTGCATGACTCATTTTTACCTCGTACAGTTGAGCCA
AAGCAGCATGATCCCACGTACACGGAGAAAGGGCAATGGATCAAGCTACT
CTGCTACGTTCATGGAACGGCCGCGGGTTTGCATACTCGACTCTGCGTAG
AGACCCTACTTCGATGCTACAATTTTTGGCCTCTAACGGCATGCTGCGAG
ACCCATGTGCATCCATAGACGACTCGCTACTCCTGATCTCGTTCTATTTT
GTACGGGACACAGCGACAACAAAATGCAACGCAAACGTGCAAAGGCCTTT
AGTCTACACCACAGCAGACCGTTCTGGGTGCACGTGCTCAGGGTGCATTC
CTCTCCCTCGTTCTCTCTGCTACTGTAGCCTGCCTGTATCAGAATGAGGT
GGGGGACCGTCTGCTGACACACAAAAGCGATCTATTTGTCTCCGTCCTCG
CTTCGAAAAAGTCGACATGTCAACACCTCAACACACCAACATGTTGGTCA
TGGCTGTCATGGTGGTGTGTTCCGGATGAGGGTGTTCTTCGATGTCTGAG
ACTTCTTCGGGAGTATGCATACATAGATCTCGCCACATAGCGGCGCCTGT
CAGCCTCGTTGCCTGGCCCTACTTACTGTATCGCCTTCCAGCATTACGAA
GTTACGCATTCTTGTGTAGGATCATCGATCTCCAACTTACCGAATTCCAC
TTCAAGATGAAGATACCACCTTCTCCTTGATATCATGAGATGCTCTGCTG
TACCTCGCCCGGTGACGATGCTCTTGCGGCTAAGCATTCGCCTAACGCGA
AAAATATTCTCGAATCGAGTTCTATGTTCAACGATGTTACCACACACCCC
ACAATAGCACCCACGGTGGTAAGGTTTGTACTTGGACCTATATGCATGTC
AAGGTTTTAAAAAAAGTACCGGTGTTATCTTGTGTGGCACGCGGTGCTTT
GAAAACCACGTGTAGTAGCATGTGCTCCACTCGCTGCCTGATGGTGTAAA
GCACCGCCGGTATTCGTCAAAGTGTCCCCCGTGCCTACCCCAACATATGA
TGTTGCTCGGCAGTGCACTCGCAAAGGTCAGTGACCGAAATAAAGTAATT
TCGTGAGGCGGCGTGGTTTGTGCTGATAAATGCCAACCACGGTCATTGCA
TTACCCATGTCTCTCTGTGGGTAAATTCCTGACGTTGTTTATTTTGTCGG
ACACTTTTATCCAAGGGTACAAAAGGTCTTGCTCTGGGTTCGCAAAGGGC
AGCCGAGCAAGCGAGTCCCTGTATGGCGTGCTCGTTGGTGCAACCCGTAC
CCCGTTACGTCCGTTTGCACGAAAAACCGTTCCACTCCGTCGTTCTTTTG
TGTCGTGGGACAACAGCGGCAAGCTCGCGGGGGGAGTACGTCAAGACTGT
GCTTGGAGGGGGGGCGCTGGGGCTGGCGACGGTATATTTTCCTGCGCTGT
CTAAGCGGGCGGAGGCGGCAGCGCAGAGTCTCGAAGAGCTGGAGGCCGAT
ATCATGATCTGCAAGGTTGGTAGGAAAGGTTTTGGGATGAAGCATCCACC
AAGACACGTGTTGCCCGCTGTATGTTGTCGTAAGGTTCATCGGACATGAT
GGCACGAGTCAGCGCCGTGCACACGGAAGGCACATGCGGAACTGTCCACG
CGGAAGTTGCTGTTGTCCTTATCAACAGCATGAACTGACAACAATCAGGA
CGATCAAAGTCACTGCAGGCTAGGGAACGTACGGTTTCCGGTCACCCCGT
AGGTGGAGTTGATTTCCCTTGAAGACATTCCGGTAATGCCTCGTACAAAG
AAGGAGGGAACTCGCAAGCAGTTGAAGTCGAGGGGCACATTCCCTCATCT
TCGCGGTGAGCATTCGCTTGCGCTCGGTCTTGTTTCCTCGTGTATGTCCC
GGTCAAGTTTCTTCTTCCCTCTCCCCACAGACTCGATTTTTTTCTCGTTT
CCCTTGCTTTTACTTTGTCTTGGGTGTCGGGCGAGAGCTGGAATATCCAG
AGTCGGACATGTGGACATGCTGATATGTTTGGTGTTTCCACGCCGCGTGC
TATTGTTGTAGCAGTGTCGTTAGCTTTCTGTCGGTGTGTATTGGCGGGCC
ACGGCAGTGTGGTCGAAATCAGCCAATGAAGTAACGTGCCCTTCAGTACT
GTTTTTGTCAAGAACGGCTGCTTCCTCTTGAAGCGTCTCGTGGTAATTTT
CGTTTCTTACCCAACCAGATCGTGCCGTTACAATTAGTGCAACCGGAAGC
CGGAAGAGTTAGTCGTGCAATCGGTGTCAGCATGCGTACGTTATTGATGG
TGCGACGCGTGTTTTGCCAACACAGGTCATCGCCACACACACGATACAAG
CCTGATTTGGAACCACGGAGGAGCGTCGGAGGGTATGAAAGTGAAAGCCC
AAATTTTGACGCATTTTCTTCCGTGTTGCGTCCGATGCATGTTTTGTGGT
CTCATGTTGTGGTCTCACTTTGCATGCATGATGTCGACCAAAACATACAC
CAAACGTTTTGCAGGAAGTGTTCAAGCCTACCCTAAAGTACCTCAAGGCG
GAGCAGTTCGACGCCGCACGAACCAACACCAACTACATTACGCGCTTCTT
CAACCTCAAGAAGAAGATCGACTCGTTTATCGTCCAAGCTAGCGACGTCG
TGGATGACCCGGATACGGCAAGTTTGTCTCTTAACGATCGCGACTTCGAT
AGTTAATCACGCCCGTCTTCATGCGTGAGTGCAGTTTTTGGGGGCGGGGA
GTCGAGGCGTCAATCGTTTAGGCGTACGATGTCGTCGACGATGCGAAAAA
GTGTTGAAAACATACAACCCTGCCTGTCTTGCCCCCCGGGATTTAGCAGG
TTTCGTTCCCGGTCGTGTTGAAACGTTTCCCGTTTGAAGCCCGTCGGCAT
TTTCGACAATGGGTCTGTCAAGAATCATCTGAGTTGCGTGCGTCAGTCTG
GTAAAGACTGACCCTGACTTGAGCATTCTGTCGAACAGACGAGACTTGTA
CCGTGATGTTAAATTGGTTTCCAACACTTGGACGATATGGAGACGGTATT
CCGCCAAGCTTGCTGCAAGCCTCATCGATCGCCGAGCTGAGCCGGAACTG
CCCCCGATGAAGTCTGAACCAATTTTTTTTGTATTTCGACCAAACGCACG
GTGTTTGTTAGATGGAGAAGGCGTTCGATATGGCCCAAGAAGTAGAGGCC
CTCTTCACCAACTTCGACTCTTCTGTATACACGATCATCTTCATCCCTGC
CGACGCCGACGGCGTGCTCCCCCCGGGGGCGGAAAAGTACCTCAAACAGG
TGACAATTTTGTTTTGTGCCGTGTAGTGTTCGGTTGTTCAAGGCTCAGTC
GGGGATAGAGTTCCGAGCAATGTTTGTTGGGTTGGATAAGTTTGGCTGCC
TGTTGTATAGTTTTCTGAAGATGTTGATGCGCTGCGTGCGTAGTGTTCGC
GACCTTACGCATGCAGTGCCTGCCCAACATGGCACTCGGGCCACACTCGA
AGCACCACACCGTTGAACACCCCTTTTGTGCGGCACACGACGCGGAAACT
TGTCGAGTAGTTGTGCTGCTGTGTTTTCCGGCGTGCGTTATCTTTTGTTG
GGCGAGAAAGACGAATAAATTCTGAGCGCGCGGTTTCACGCAGATGCGGA
ACTTCGCATCTCACAGCCCCCAACACATTGCGGCGTGTTCTAGACGACGG
AAAGGTTCTTGTTTTTTTTTGTCTCCAACTGTTTTTATAACGGTGGCGTG
TCACAGAGATGCAGCCCACTTTTTCCCGTGGGTTACAGAATTTCATCCCA
CATTTTAGATTGCCTCGTGATTTGGCCGCGTGGCACATGCGAACGGTCCT
GTCCTGTCATCGTCGGCTTCAACACCAGTGGTGCAAGCCTGCCTCGCCGG
AGCAGCGTGCTGCTGAACCTGCCTCGAGCATACACTTATAATTGTTCGAT
GCGCAAGTCATCCGTAGTACCCGCACGCACCCATTGCACGCCTTCTTGCC
GTAGGCTTCCTCCTGATTTTCTGTCTTTTCTCCTGTCTTGTTTTCCTCTG
TCTTCTCTTTTTCTTGTTTTCTTCTTCTTTCGTTTTTGTCAGGCGTATGG
TTTCTACGATGACATCAACAAGGTGCTGGACTTCTACATAGACCTGGTGC
CCCCCGAGACGAAGGCTGCAGCGGAGAAGTTGCTCCCGGCGAAGAGGGCT
CCTCTGCCTGGCTTCCTGTTCAAGGAGAAGTCGACGCTCATGAAGGAAAA
GGTGGCAATAAGCTAACGTATGCAAGGGAACTTAGTTTAGAGGCAAGCCG
CTCCAGAACGATTGCTCAAGACAAGAGTGGGTTTGGTGGAGTTTGCCGAA
GATACTCTGTCTCGCCGTCATGTCGATTTGTTGCGGCAAGCTGAGCGTTG
CGAAGGCATGATAACGAGCTTCGCGAGGTTGGAAGATCTCCTTGTGCTCG
AGTACCATTTTAGCATGTGAACAAAATCGGGACCGTATAGAGAGGGCATC
GCTACTGCAGGCTGCGACATGGGGAGAAGTGTGTTGGACTTCAACACCAT
GAGGCTAGAGTTGCCCACTGGCAAGCTAGGGCGAGAAGCTACACGGCGTT
GATCTGGTGCCTCTCAAGTGGATGCTATGCTTCTTGGCCTAGGTTGCACC
TGGTTTGTGTGGATCCCAGGACCTTCCTGAGGGAAAGCAGGCAAAGAATA
TTGGGATTGGCTTGTCGGCCATGAGGACCGCCGAGCAAGTCGGCTAGCTC
ATGTAGGGGTGGGTTTGGAGGTCCGTCTTCTACAGAGCAAACAAGCAGGA
CTGATCGCCAGTGCAAGTCGGGCAGTCCAAGCGTTCGAGCATCCTGAAGC
TGTCTCACCTTACACTCAGGCTGCCTGTATGCAGAGCCACGGCTGCGGGA
GCTAGCTAGACTTGAGAGCGCGATTGTGTTGCGGTTACCAGTGCGCTCCC
GCGCACCCGTTGTTGCCCGTGTGTGAAATCACAGCCACTTAGACCTAGAG
TTTTAGAATATGGTAAAGAGTGCTAGATGCAGAAAGGTGAGGTTCTTGTC
TGTGGATCAAATTTTTTACTCGCCAGTTGTCTCTCGTTCTTCGGGAATCA
TCGAGCTTCCCTCTGTTTCGGTTGCCTCCGTGTATTCGATGACTGCTGTT
ATTGCTGGCCAAGATTCATGCCTTTAGCGGTAAACGTGCCGATTTGATCA
ATCGAGCGCCCCGTCAGTACAAAGCCAGCAGATCGCCAGGCCGTCTGACC
AGCCTGCGGGGAGAAGTATTTCTCGCAAGAATGAGTC back to topCoding sequence (CDS) from alignment at Ecto-sp13_S_contig7616:2..5438+ >mRNA_Ecto-sp13_S_contig7616.18823.1 ID=mRNA_Ecto-sp13_S_contig7616.18823.1|Name=mRNA_Ecto-sp13_S_contig7616.18823.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=630bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7616:2..5438+ (Ectocarpus species13 EcNAP12_S_4_19m) ATGTCACTTGGTGAAGCGGCAAGCTCGCGGGGGGAGTACGTCAAGACTGT GCTTGGAGGGGGGGCGCTGGGGCTGGCGACGGTATATTTTCCTGCGCTGT CTAAGCGGGCGGAGGCGGCAGCGCAGAGTCTCGAAGAGCTGGAGGCCGAT ATCATGATCTGCAAGGAAGTGTTCAAGCCTACCCTAAAGTACCTCAAGGC GGAGCAGTTCGACGCCGCACGAACCAACACCAACTACATTACGCGCTTCT TCAACCTCAAGAAGAAGATCGACTCGTTTATCGTCCAAGCTAGCGACGTC GTGGATGACCCGGATACGATGGAGAAGGCGTTCGATATGGCCCAAGAAGT AGAGGCCCTCTTCACCAACTTCGACTCTTCTGTATACACGATCATCTTCA TCCCTGCCGACGCCGACGGCGTGCTCCCCCCGGGGGCGGAAAAGTACCTC AAACAGGCGTATGGTTTCTACGATGACATCAACAAGGTGCTGGACTTCTA CATAGACCTGGTGCCCCCCGAGACGAAGGCTGCAGCGGAGAAGTTGCTCC CGGCGAAGAGGGCTCCTCTGCCTGGCTTCCTGTTCAAGGAGAAGTCGACG CTCATGAAGGAAAAGGTGGCAATAAGCTAA back to top
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