prot_Ecto-sp13_S_contig7593.18795.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7593.18795.1
Unique Nameprot_Ecto-sp13_S_contig7593.18795.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length534
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7593.18795.1 vs. uniprot
Match: D8LP19_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP19_ECTSI)

HSP 1 Score: 449 bits (1155), Expect = 1.170e-144
Identity = 350/427 (81.97%), Postives = 355/427 (83.14%), Query Frame = 0 
Query:    1 MGKPSDAGSLRAAGYRAVSRAVLQLGEGAAPYLATPALPAILNEVRSAVAASEREAXXXXXXGVES-SFEVVXXXXXIGVXXXXXXSKKGMGIEPAMSARKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAEEQAVCAGLSCLSQVVVCCKGHLPLGGRLAVEEVLHRGLELLAHAGAAAKGSRGXXXXXXXXXXXGAG--RRCARLEDPQVAREFLGLAHACLMTPLADGTRSGSLSVAIAAFRSFASHPDQRLAAASQQALAGCGAVLYPRAAPLHLPHAVTSQARAWGGSSASSTGRGLPIGWGDTLMVAEGESAEEESQEDLEDYQHPGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGAQT---AAVEEGGRFHQTVPRDASST 421
            M KPSDAGSLRAAGYRAVSRAVLQLGEGAAPYLATPALPAIL EVRSAVAASE EAXXXXXX     S E V      GV      SKKGMGIEPAMSARK    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX              LAEEQAVCAGLSCLS+VVVCCKGHLPLGGRLAVEEVLHRGLELL+HAG AAKGSRG  XXXXXXXXX     RRCARLEDP+VAREFLGLAHACLMTPLADGTRSGSLSVAIAAFRSFASHPDQRLAAASQQALAGCGAVLYPRAAPLHLPHAVTSQARAWGGSSASSTGRGLP+GWGDTLMVAEGESAEEESQEDLEDYQHPGRGXXXXXXXXX               XXXXXXXXXXXXX        AA+EEGGRF QTVPRDASST
Sbjct:  409 MAKPSDAGSLRAAGYRAVSRAVLQLGEGAAPYLATPALPAILAEVRSAVAASEPEAXXXXXXXXXXXSVEFVAATGAPGVAAVGGGSKKGMGIEPAMSARKSSQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTGAAA--------LAEEQAVCAGLSCLSRVVVCCKGHLPLGGRLAVEEVLHRGLELLSHAGGAAKGSRGDGXXXXXXXXXXXXXXRRCARLEDPRVAREFLGLAHACLMTPLADGTRSGSLSVAIAAFRSFASHPDQRLAAASQQALAGCGAVLYPRAAPLHLPHAVTSQARAWGGSSASSTGRGLPMGWGDTLMVAEGESAEEESQEDLEDYQHPGRGXXXXXXXXXALTVRAAGLAAEGLTXXXXXXXXXXXXXXXXXXXXXAALEEGGRFPQTVPRDASST 827
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BLAST of mRNA_Ecto-sp13_S_contig7593.18795.1 vs. uniprot
Match: A0A6H5JJU2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJU2_9PHAE)

HSP 1 Score: 407 bits (1046), Expect = 6.010e-128
Identity = 271/425 (63.76%), Postives = 281/425 (66.12%), Query Frame = 0 
Query:    1 MGKPSDAGSLRAAGYRAVSRAVLQLGEGAAPYLATPALPAILNEVRSAVAASEREAXXXXXXGVESSFEVVXXXXXIGVXXXXXXSKKGMGIEPAMSARKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAEEQAVCAGLSCLSQVVVCCKGHLPLGGRLAVEEVLHRGLELLAHAGAAAKGSRGXXXXXXXXXXXGAGRRCARLEDPQVAREFLGLAHACLMTPLADGTRSGSLSVAIAAFRSFASHPDQRLAAASQQALAGCGAVLYPRAAPLHLPHAVTSQARAWGGSSASSTGRGLPIGWGDTLMVAEGESAEEESQEDLEDYQHPGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----VGAQTAAVEEGGRFHQTVPRDASST 421
            MGKPSDAGSLRAAGYRAVSRAVLQLGEGAAPYLATPALPAIL EVR+AVAASE E XXXXXX                                                                                             L+EEQAVCAGLSCLS+VVVCCKGHLPLGGRLAVEEVLHRGLELL+HA  AAKGSRG XXXXXXX   G GRRCA LEDP+VAREF GLAHACLMTPLADGTRSGSLSVAIAAFRS ASH D+RLAAASQQALAGCGA+LYPRAAPLHLPHAVTSQARAWGGSSASSTGRGLP+GWGDTLMVAEGESAEEES+EDL+DYQHPGRGXXXXXXXX                                  GAQTAAVE GG F QTVPRDASST
Sbjct:  499 MGKPSDAGSLRAAGYRAVSRAVLQLGEGAAPYLATPALPAILAEVRAAVAASEPEXXXXXXXXXXXXXXXXA-----------------------------------------------------------------------------------LSEEQAVCAGLSCLSRVVVCCKGHLPLGGRLAVEEVLHRGLELLSHAAGAAKGSRGNXXXXXXXGASGEGRRCAPLEDPRVAREFFGLAHACLMTPLADGTRSGSLSVAIAAFRSLASHSDERLAAASQQALAGCGAILYPRAAPLHLPHAVTSQARAWGGSSASSTGRGLPMGWGDTLMVAEGESAEEESREDLDDYQHPGRGXXXXXXXXMALTVRAAELAAEGLTAAAVAEPIVTPLPXXXXAGAQTAAVEGGGGFPQTVPRDASST 840
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7593.18795.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LP19_ECTSI1.170e-14481.97Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JJU2_9PHAE6.010e-12863.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 521..534

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7593contigEcto-sp13_S_contig7593:4426..6917 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7593.18795.1mRNA_Ecto-sp13_S_contig7593.18795.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7593 4426..6926 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7593.18795.1 ID=prot_Ecto-sp13_S_contig7593.18795.1|Name=mRNA_Ecto-sp13_S_contig7593.18795.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=534bp
MGKPSDAGSLRAAGYRAVSRAVLQLGEGAAPYLATPALPAILNEVRSAVA
ASEREAAGGGGTGVESSFEVVAATAAIGVAAVGGGSKKGMGIEPAMSARK
SSQKKQRRSREKEVGRALAAADAAAAATATAASNGGGSRGDSGGGGGARR
TGAAALAEEQAVCAGLSCLSQVVVCCKGHLPLGGRLAVEEVLHRGLELLA
HAGAAAKGSRGGGGGGSGGGASGAGRRCARLEDPQVAREFLGLAHACLMT
PLADGTRSGSLSVAIAAFRSFASHPDQRLAAASQQALAGCGAVLYPRAAP
LHLPHAVTSQARAWGGSSASSTGRGLPIGWGDTLMVAEGESAEEESQEDL
EDYQHPGRGGGAAGGGGMALTTRAAELAAEGLTAAAVAGPVVTPPPVGAQ
TAAVEEGGRFHQTVPRDASSTSAAAAAAGAGTENGDAATTSKSRSSKGKG
KGKGRVGGGAEGGGGSGDGGSSAGAGAAGTVEEDGHNDNEAAAAATTTAG
TRKRPRNDVDGDDARDAMDGDEEEEEEEEEVELE
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