prot_Ecto-sp13_S_contig75715.18772.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig75715.18772.1
Unique Nameprot_Ecto-sp13_S_contig75715.18772.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length41
Homology
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BLAST of mRNA_Ecto-sp13_S_contig75715.18772.1 vs. uniprot
Match: A0A6H5KTV3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTV3_9PHAE)

HSP 1 Score: 69.3 bits (168), Expect = 1.090e-12
Identity = 31/32 (96.88%), Postives = 31/32 (96.88%), Query Frame = 0 
Query:    1 MVKVLWEEAKKEERGATLIGSRVRIWWDGDMV 32
            MVKVLWEEAKKEERGA LIGSRVRIWWDGDMV
Sbjct:    1 MVKVLWEEAKKEERGAALIGSRVRIWWDGDMV 32
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BLAST of mRNA_Ecto-sp13_S_contig75715.18772.1 vs. uniprot
Match: D8LCY6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCY6_ECTSI)

HSP 1 Score: 65.9 bits (159), Expect = 1.820e-11
Identity = 28/32 (87.50%), Postives = 31/32 (96.88%), Query Frame = 0 
Query:    1 MVKVLWEEAKKEERGATLIGSRVRIWWDGDMV 32
            MV+VLWEEAK+EERGA LIGSR+RIWWDGDMV
Sbjct:    1 MVEVLWEEAKEEERGAALIGSRIRIWWDGDMV 32
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig75715.18772.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KTV3_9PHAE1.090e-1296.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCY6_ECTSI1.820e-1187.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig75715contigEcto-sp13_S_contig75715:452..574 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig75715.18772.1mRNA_Ecto-sp13_S_contig75715.18772.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig75715 452..574 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig75715.18772.1 ID=prot_Ecto-sp13_S_contig75715.18772.1|Name=mRNA_Ecto-sp13_S_contig75715.18772.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=41bp
MVKVLWEEAKKEERGATLIGSRVRIWWDGDMVWYEGTVVG*
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