prot_Ecto-sp13_S_contig75623.18762.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig75623.18762.1
Unique Name	prot_Ecto-sp13_S_contig75623.18762.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	173

Homology

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BLAST of mRNA_Ecto-sp13_S_contig75623.18762.1 vs. uniprot
Match: 1433_FUCVE (14-3-3-like protein n=3 Tax=Phaeophyceae TaxID=2870 RepID=1433_FUCVE)

HSP 1 Score: 53.5 bits (127), Expect = 2.210e-5
Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = 0

Query:    1 VAYKNVIGSRRASWRVISSIEGKDTV 26
            VAYKNVIGSRRASWRVISSIEGKDTV
Sbjct:   47 VAYKNVIGSRRASWRVISSIEGKDTV 72

[Close]

BLAST of mRNA_Ecto-sp13_S_contig75623.18762.1 vs. uniprot
Match: A0A2S5B2A9_9BASI (14_3_3 domain-containing protein n=9 Tax=Opisthokonta TaxID=33154 RepID=A0A2S5B2A9_9BASI)

HSP 1 Score: 52.0 bits (123), Expect = 8.310e-5
Identity = 43/128 (33.59%), Postives = 70/128 (54.69%), Query Frame = 0

Query:    1 VAYKNVIGSRRASWRVISSIEGKDTVVRARSQRASGSKVERALFCPNCEEKGTSRFCF-LDTVFYFNLVRACPSG-GPIWISEQETDCPSPAAQTAPPIPQEVDIHLAEQANDACSQSA-TDLSPYIP 125
            VAYKNVIG+RRASWR++SSIEGK+   +  +Q+A+  K  R        EK  +  C  + +V   +L+ +  SG   ++  + + D     A+ A   P++ +   + +A  A S+ A T+L+P  P
Sbjct:   50 VAYKNVIGARRASWRIVSSIEGKEEA-KGNTQQATAIKAYREKI-----EKELAGICEDILSVLEQHLIPSAESGESKVFYHKMKGDYHRYLAEFATGEPRQKNADASLEAYKAASEIAQTELAPTHP 171

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig75623.18762.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig75623.18762.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
1433_FUCVE	2.210e-5	100.00	14-3-3-like protein n=3 Tax=Phaeophyceae TaxID=287...	[more]
A0A2S5B2A9_9BASI	8.310e-5	33.59	14_3_3 domain-containing protein n=9 Tax=Opisthoko...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036815	14-3-3 domain superfamily	GENE3D	1.20.190.20		coord: 1..45 e-value: 5.9E-7 score: 31.1
IPR036815	14-3-3 domain superfamily	SUPERFAMILY	48445	14-3-3 protein	coord: 1..25
IPR000308	14-3-3 protein	PANTHER	PTHR18860	14-3-3 PROTEIN	coord: 1..25 coord: 145..173
None	No IPR available	PANTHER	PTHR18860:SF99	14-3-3-LIKE PROTEIN GF14 CHI-RELATED	coord: 1..25
None	No IPR available	PANTHER	PTHR18860:SF99	14-3-3-LIKE PROTEIN GF14 CHI-RELATED	coord: 145..173

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig75623	contig	Ecto-sp13_S_contig75623:98..616 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig75623.18762.1	mRNA_Ecto-sp13_S_contig75623.18762.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig75623 98..617 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig75623.18762.1 ID=prot_Ecto-sp13_S_contig75623.18762.1|Name=mRNA_Ecto-sp13_S_contig75623.18762.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=173bp
VAYKNVIGSRRASWRVISSIEGKDTVVRARSQRASGSKVERALFCPNCEE
KGTSRFCFLDTVFYFNLVRACPSGGPIWISEQETDCPSPAAQTAPPIPQE
VDIHLAEQANDACSQSATDLSPYIPSLVAGWGSGAPLCGSARLPRPQSDQ
LPLIRDYKSKIETELTDICDDIL

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036815	14-3-3_dom_sf
IPR000308	14-3-3