prot_Ecto-sp13_S_contig7561.18758.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7561.18758.1
Unique Nameprot_Ecto-sp13_S_contig7561.18758.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length121
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7561.18758.1 vs. uniprot
Match: A0A6H5JHV6_9PHAE (C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHV6_9PHAE)

HSP 1 Score: 52.0 bits (123), Expect = 3.110e-5
Identity = 33/64 (51.56%), Postives = 34/64 (53.12%), Query Frame = 0 
Query:    2 CSAEAATGEGGSAGCEAEGYPEGYRILDDSPIEARSSSSSSSRCGVCRCRGGVDEVVLELWDEY 65
            CSAEAATGEGGSA CEAE     +R                        RGGVDEVVLELWDEY
Sbjct:  128 CSAEAATGEGGSADCEAE-----WR------------------------RGGVDEVVLELWDEY 162
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7561.18758.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JHV6_9PHAE3.110e-551.56C2 domain-containing protein n=1 Tax=Ectocarpus sp... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7561contigEcto-sp13_S_contig7561:307..1271 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7561.18758.1mRNA_Ecto-sp13_S_contig7561.18758.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7561 307..4406 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7561.18758.1 ID=prot_Ecto-sp13_S_contig7561.18758.1|Name=mRNA_Ecto-sp13_S_contig7561.18758.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=121bp
ACSAEAATGEGGSAGCEAEGYPEGYRILDDSPIEARSSSSSSSRCGVCRC
RGGVDEVVLELWDEYVREDEKAGGGGGGGGGGGRGGRGVQAAVKAAAAAA
RRGDRALTSPTICLTTGCST*
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