prot_Ecto-sp13_S_contig75594.18753.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig75594.18753.1
Unique Nameprot_Ecto-sp13_S_contig75594.18753.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length90
Homology
BLAST of mRNA_Ecto-sp13_S_contig75594.18753.1 vs. uniprot
Match: D8LFW4_ECTSI (Uracil-DNA glycosylase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFW4_ECTSI)

HSP 1 Score: 171 bits (433), Expect = 2.070e-51
Identity = 83/90 (92.22%), Postives = 86/90 (95.56%), Query Frame = 0
Query:    1 QVVILGQDPYHQPGQAHGLAFSVMKGVMQPPSLRNMLKEAVSCCGITPTKSGNLDSWCSQGVLLLNTVLSVERSKANSHKNQGYACGTTA 90
            +VVILGQDPYHQPGQAHGLAFSVMKGVMQPPSLRNM+KEAVSCCGITPTKSGNLDSWCSQGVLLLNTVLSVERSKANSHKNQG+   T A
Sbjct:  112 KVVILGQDPYHQPGQAHGLAFSVMKGVMQPPSLRNMVKEAVSCCGITPTKSGNLDSWCSQGVLLLNTVLSVERSKANSHKNQGWEKFTDA 201          
BLAST of mRNA_Ecto-sp13_S_contig75594.18753.1 vs. uniprot
Match: A0A836CBN7_9STRA (Uracil-DNA glycosylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBN7_9STRA)

HSP 1 Score: 119 bits (299), Expect = 7.920e-32
Identity = 56/84 (66.67%), Postives = 67/84 (79.76%), Query Frame = 0
Query:    1 QVVILGQDPYHQPGQAHGLAFSVMKGVMQPPSLRNMLKEAVSCCGITPTKSGNLDSWCSQGVLLLNTVLSVERSKANSHKNQGY 84
            +VVILGQDPYH PGQAHGL+FSV +GV QPPSLRN++KEA +CCG  PTK+G L  W  QGVLLLNTVL+VE+    SH  +G+
Sbjct:   58 RVVILGQDPYHGPGQAHGLSFSVAQGVAQPPSLRNIVKEATACCGTKPTKNGCLTPWAVQGVLLLNTVLTVEKGAPLSHHKKGW 141          
BLAST of mRNA_Ecto-sp13_S_contig75594.18753.1 vs. uniprot
Match: A0A7S2P901_9STRA (Uracil-DNA glycosylase (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2P901_9STRA)

HSP 1 Score: 115 bits (289), Expect = 3.740e-31
Identity = 55/84 (65.48%), Postives = 63/84 (75.00%), Query Frame = 0
Query:    1 QVVILGQDPYHQPGQAHGLAFSVMKGVMQPPSLRNMLKEAVSCCGITPTKSGNLDSWCSQGVLLLNTVLSVERSKANSHKNQGY 84
            +VVI+GQDPYHQPGQ HGLAFSV KGV  PPSLRN+ KEA+    I P   GNL+ W  QGVLLLNTVL+V R +ANSH   G+
Sbjct:   22 RVVIVGQDPYHQPGQGHGLAFSVRKGVKTPPSLRNIFKEAMEDVSIDPPTHGNLEGWARQGVLLLNTVLTVRRGEANSHAKMGW 105          
BLAST of mRNA_Ecto-sp13_S_contig75594.18753.1 vs. uniprot
Match: A0A6G0XWG6_9STRA (Uracil-DNA glycosylase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XWG6_9STRA)

HSP 1 Score: 117 bits (293), Expect = 2.060e-30
Identity = 58/90 (64.44%), Postives = 68/90 (75.56%), Query Frame = 0
Query:    1 QVVILGQDPYHQPGQAHGLAFSVMKGVMQPPSLRNMLKEAVSCCGITPTKSGNLDSWCSQGVLLLNTVLSVERSKANSHKNQGYACGTTA 90
            +VVI+GQDPYH PGQAHGL FSV +GV  PPSL+N+ KEA S  GI     G+L SWC+QGVLLLNTVL+V  S+ANSHK QG+   T A
Sbjct:  110 KVVIIGQDPYHGPGQAHGLCFSVQRGVPPPPSLKNIYKEACSDVGIPKPSHGSLLSWCNQGVLLLNTVLTVRASEANSHKKQGWETFTDA 199          
BLAST of mRNA_Ecto-sp13_S_contig75594.18753.1 vs. uniprot
Match: B8C427_THAPS (Uracil-DNA glycosylase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C427_THAPS)

HSP 1 Score: 117 bits (292), Expect = 2.610e-30
Identity = 55/82 (67.07%), Postives = 64/82 (78.05%), Query Frame = 0
Query:    3 VILGQDPYHQPGQAHGLAFSVMKGVMQPPSLRNMLKEAVSCCGITPTKSGNLDSWCSQGVLLLNTVLSVERSKANSHKNQGY 84
            VI+GQDPYHQPGQ HGLAFSV KGV  PPSLRN+ KEA+   GI+P + GNL+ W  QGVLLLNTVL+V R +ANSH   G+
Sbjct:  106 VIVGQDPYHQPGQGHGLAFSVRKGVSIPPSLRNIFKEAIDDVGISPPEHGNLEGWARQGVLLLNTVLTVRRGEANSHAKLGW 187          
BLAST of mRNA_Ecto-sp13_S_contig75594.18753.1 vs. uniprot
Match: A0A518E2E3_9BACT (Uracil-DNA glycosylase n=1 Tax=Lignipirellula cremea TaxID=2528010 RepID=A0A518E2E3_9BACT)

HSP 1 Score: 115 bits (287), Expect = 4.800e-30
Identity = 56/84 (66.67%), Postives = 64/84 (76.19%), Query Frame = 0
Query:    1 QVVILGQDPYHQPGQAHGLAFSVMKGVMQPPSLRNMLKEAVSCCGITPTKSGNLDSWCSQGVLLLNTVLSVERSKANSHKNQGY 84
            QVV+LGQDPYH PGQAHGL FSV +GV  PPSLRNMLKE  +  G +    G L +W  QGVLLLNTVL+V R +ANSHKNQG+
Sbjct:   56 QVVLLGQDPYHGPGQAHGLCFSVKRGVAAPPSLRNMLKELAADQGCSIPTHGELTAWARQGVLLLNTVLTVRRGEANSHKNQGW 139          
BLAST of mRNA_Ecto-sp13_S_contig75594.18753.1 vs. uniprot
Match: W9UYG7_9GAMM (Uracil-DNA glycosylase n=3 Tax=Nitrincola TaxID=267849 RepID=W9UYG7_9GAMM)

HSP 1 Score: 115 bits (287), Expect = 5.170e-30
Identity = 55/88 (62.50%), Postives = 66/88 (75.00%), Query Frame = 0
Query:    1 QVVILGQDPYHQPGQAHGLAFSVMKGVMQPPSLRNMLKEAVSCCGITPTKSGNLDSWCSQGVLLLNTVLSVERSKANSHKNQGYACGT 88
            +VVILGQDPYHQPGQAHGL FSV  GV  PPSL+N+ KE  +  G+ P   G LD+W  QGVLLLN+VL+VE SKAN+H+ QG+   T
Sbjct:   59 KVVILGQDPYHQPGQAHGLCFSVRPGVRVPPSLQNIYKELQADLGVRPVSHGYLDTWAEQGVLLLNSVLTVEHSKANAHQGQGWEAFT 146          
BLAST of mRNA_Ecto-sp13_S_contig75594.18753.1 vs. uniprot
Match: A0A6H9GUI4_9SPHN (Uracil-DNA glycosylase n=5 Tax=Novosphingobium TaxID=165696 RepID=A0A6H9GUI4_9SPHN)

HSP 1 Score: 114 bits (286), Expect = 7.670e-30
Identity = 55/90 (61.11%), Postives = 67/90 (74.44%), Query Frame = 0
Query:    1 QVVILGQDPYHQPGQAHGLAFSVMKGVMQPPSLRNMLKEAVSCCGITPTKSGNLDSWCSQGVLLLNTVLSVERSKANSHKNQGYACGTTA 90
            +VVILGQDPYH PGQAHGL+FSV +GV  PPSL N+ KE  S CG+TP   GNL+ W  QGVLLLN  L+VE ++A SH+N+G+   T A
Sbjct:   64 RVVILGQDPYHGPGQAHGLSFSVPEGVKVPPSLVNIYKELASDCGVTPPGHGNLEHWARQGVLLLNNALTVEEAQAGSHQNKGWEAITDA 153          
BLAST of mRNA_Ecto-sp13_S_contig75594.18753.1 vs. uniprot
Match: A0A3R6V3X4_9STRA (Uracil-DNA glycosylase (Fragment) n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6V3X4_9STRA)

HSP 1 Score: 113 bits (283), Expect = 7.680e-30
Identity = 56/90 (62.22%), Postives = 68/90 (75.56%), Query Frame = 0
Query:    1 QVVILGQDPYHQPGQAHGLAFSVMKGVMQPPSLRNMLKEAVSCCGITPTKSGNLDSWCSQGVLLLNTVLSVERSKANSHKNQGYACGTTA 90
            +VVI+GQDPYH PGQAHGL FSV +GV  PPSL+N+ KEA S  GI   K G+L SWC+QGVL+LN VL+V  ++ANSHK QG+   T A
Sbjct:   21 KVVIIGQDPYHGPGQAHGLCFSVARGVPPPPSLKNIYKEANSDVGIPIPKHGSLLSWCNQGVLMLNAVLTVRATEANSHKKQGWETFTDA 110          
BLAST of mRNA_Ecto-sp13_S_contig75594.18753.1 vs. uniprot
Match: A0A3N4GVD6_9LACT (Uracil-DNA glycosylase n=1 Tax=Aerococcus sp. SJQ22 TaxID=2487350 RepID=A0A3N4GVD6_9LACT)

HSP 1 Score: 114 bits (285), Expect = 9.600e-30
Identity = 57/90 (63.33%), Postives = 66/90 (73.33%), Query Frame = 0
Query:    1 QVVILGQDPYHQPGQAHGLAFSVMKGVMQPPSLRNMLKEAVSCCGITPTKSGNLDSWCSQGVLLLNTVLSVERSKANSHKNQGYACGTTA 90
            +VVILGQDPYHQPGQAHGL+FSV KGV  PPSLRN+ KE  +   I P   GNL SW  QGVLLLN VL+V  S+AN+HK +G+   T A
Sbjct:   60 KVVILGQDPYHQPGQAHGLSFSVQKGVKIPPSLRNIYKELQNDLAIEPANHGNLTSWAEQGVLLLNAVLTVPDSQANAHKGKGWEVLTDA 149          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig75594.18753.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFW4_ECTSI2.070e-5192.22Uracil-DNA glycosylase n=2 Tax=Ectocarpus TaxID=28... [more]
A0A836CBN7_9STRA7.920e-3266.67Uracil-DNA glycosylase n=1 Tax=Tribonema minus Tax... [more]
A0A7S2P901_9STRA3.740e-3165.48Uracil-DNA glycosylase (Fragment) n=1 Tax=Skeleton... [more]
A0A6G0XWG6_9STRA2.060e-3064.44Uracil-DNA glycosylase n=1 Tax=Aphanomyces euteich... [more]
B8C427_THAPS2.610e-3067.07Uracil-DNA glycosylase n=1 Tax=Thalassiosira pseud... [more]
A0A518E2E3_9BACT4.800e-3066.67Uracil-DNA glycosylase n=1 Tax=Lignipirellula crem... [more]
W9UYG7_9GAMM5.170e-3062.50Uracil-DNA glycosylase n=3 Tax=Nitrincola TaxID=26... [more]
A0A6H9GUI4_9SPHN7.670e-3061.11Uracil-DNA glycosylase n=5 Tax=Novosphingobium Tax... [more]
A0A3R6V3X4_9STRA7.680e-3062.22Uracil-DNA glycosylase (Fragment) n=1 Tax=Aphanomy... [more]
A0A3N4GVD6_9LACT9.600e-3063.33Uracil-DNA glycosylase n=1 Tax=Aerococcus sp. SJQ2... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036895Uracil-DNA glycosylase-like domain superfamilyGENE3D3.40.470.10coord: 1..90
e-value: 7.8E-37
score: 129.1
IPR036895Uracil-DNA glycosylase-like domain superfamilySUPERFAMILY52141Uracil-DNA glycosylase-likecoord: 1..85
IPR005122Uracil-DNA glycosylase-likePFAMPF03167UDGcoord: 2..80
e-value: 2.3E-9
score: 37.4
IPR002043Uracil-DNA glycosylase family 1PANTHERPTHR11264URACIL-DNA GLYCOSYLASEcoord: 2..85

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig75594contigEcto-sp13_S_contig75594:40..634 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig75594.18753.1mRNA_Ecto-sp13_S_contig75594.18753.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig75594 40..634 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig75594.18753.1 ID=prot_Ecto-sp13_S_contig75594.18753.1|Name=mRNA_Ecto-sp13_S_contig75594.18753.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=90bp
QVVILGQDPYHQPGQAHGLAFSVMKGVMQPPSLRNMLKEAVSCCGITPTK
SGNLDSWCSQGVLLLNTVLSVERSKANSHKNQGYACGTTA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036895Uracil-DNA_glycosylase-like_sf
IPR005122Uracil-DNA_glycosylase-like
IPR002043UDG_fam1