prot_Ecto-sp13_S_contig7540.18727.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7540.18727.1
Unique Nameprot_Ecto-sp13_S_contig7540.18727.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length191
Homology
BLAST of mRNA_Ecto-sp13_S_contig7540.18727.1 vs. uniprot
Match: D7G244_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G244_ECTSI)

HSP 1 Score: 337 bits (863), Expect = 5.800e-116
Identity = 174/184 (94.57%), Postives = 176/184 (95.65%), Query Frame = 0
Query:    1 MMLAGMMAVVAQAARIPVATIRCCGGGGGAGRCYRRLSTAGGRAKDWEGERQPGSGGDELQRELTPEEVSRVGARTQEMWKDHVALTTEFPDASLPPGGHEAS-VTPDAVRRKRLVYRSKQRGWLEVDLLLGTWAERNVAGLSAADMDSYEDILNLETVDIFNFITGNADPPAFVDTPMLARLQ 183
            MM+AGM AVVAQAARIPVATIRCCGGG GA RCYRRLSTA G AKDWEGERQPGSGGDELQRELTPEEV RVGARTQEMWKDHVALTTEFPDASLPPGGHEAS V+PDAVRRKRLVYRSKQRGWLEVDLLLGTWAERNVAGLSAADMDSYEDILNLETVDIFNFITGNADPPAFVD PMLARLQ
Sbjct:    1 MMIAGMKAVVAQAARIPVATIRCCGGGEGAVRCYRRLSTAAGGAKDWEGERQPGSGGDELQRELTPEEVLRVGARTQEMWKDHVALTTEFPDASLPPGGHEASSVSPDAVRRKRLVYRSKQRGWLEVDLLLGTWAERNVAGLSAADMDSYEDILNLETVDIFNFITGNADPPAFVDAPMLARLQ 184          
BLAST of mRNA_Ecto-sp13_S_contig7540.18727.1 vs. uniprot
Match: A0A835YN51_9STRA (Flavinator of succinate dehydrogenase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN51_9STRA)

HSP 1 Score: 155 bits (392), Expect = 1.550e-44
Identity = 78/126 (61.90%), Postives = 97/126 (76.98%), Query Frame = 0
Query:   58 DELQRELTPEEVSRVGARTQEMWKDHVALTTEFPDASLPPGGHEASVTPDAVRRKRLVYRSKQRGWLEVDLLLGTWAERNVAGLSAADMDSYEDILNLETVDIFNFITGNADPPAFVDTPMLARLQ 183
            D +   LT E+V RVG R+QE + +H+ L T+FP+AS PP   E  V+ D VRRKRL+YRSKQRGWLEVDLLLGTWAE NV GL+AA+MD YE ILN ETVDIFN+++G    PA ++TPM+ARL+
Sbjct:   52 DVMYENLTEEQVRRVGERSQEEFFNHIVLKTKFPEASFPP---EGGVSRDMVRRKRLIYRSKQRGWLEVDLLLGTWAEANVMGLTAAEMDEYEAILNCETVDIFNYVSGVQAVPARLETPMMARLR 174          
BLAST of mRNA_Ecto-sp13_S_contig7540.18727.1 vs. uniprot
Match: A0A4D9CR24_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CR24_9STRA)

HSP 1 Score: 136 bits (342), Expect = 4.780e-37
Identity = 67/122 (54.92%), Postives = 85/122 (69.67%), Query Frame = 0
Query:   63 ELTPEEVSRVGARTQEMWKDHVALTTEFPDASLPPGGHEASVTPDAVRRKRLVYRSKQRGWLEVDLLLGTWAERNVAGLSAADMDSYEDILNLETVDIFNFITGN-ADPPAFVDTPMLARLQ 183
            ELTP +V R+G RT+    DH+ L T+ P++SL P      V  D +RRKRL+YRSKQRGWLEVDLLLG+WA  NV  LS  ++D YE ILN+ET+DIFN + G  A PPA   + +L+RLQ
Sbjct:   48 ELTPAQVRRIGERTKAQLDDHLRLKTQVPESSLDPTAPPGPVDTDLIRRKRLLYRSKQRGWLEVDLLLGSWAAENVMSLSVPELDEYEKILNMETIDIFNLVNGALAPPPALKGSKILSRLQ 169          
BLAST of mRNA_Ecto-sp13_S_contig7540.18727.1 vs. uniprot
Match: A0A067CE16_SAPPC (Uncharacterized protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067CE16_SAPPC)

HSP 1 Score: 128 bits (321), Expect = 4.150e-34
Identity = 65/120 (54.17%), Postives = 81/120 (67.50%), Query Frame = 0
Query:   64 LTPEEVSRVGARTQEMWKDHVALTTEFPDASLPPGGHEASVTPDAVRRKRLVYRSKQRGWLEVDLLLGTWAERNVAGLSAADMDSYEDILNLETVDIFNFITGNADPPAFVDTPMLARLQ 183
            +T  +  R   R ++M KDH A+  E+PDAS    G EA +  D   RKR++YRSKQRGWLEVDLLLG WA  NV  L+A ++  YEDILN ET+DIFNFI+G    P  +DTPM+ RLQ
Sbjct:   37 ITEAQELRAQVRNEQMRKDHFAIKAEYPDASQ---GEEA-IDADKANRKRVIYRSKQRGWLEVDLLLGRWASENVMSLTADELRQYEDILNRETIDIFNFISGKDAVPPEIDTPMMKRLQ 152          
BLAST of mRNA_Ecto-sp13_S_contig7540.18727.1 vs. uniprot
Match: A0A7S2R8F6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R8F6_9STRA)

HSP 1 Score: 127 bits (318), Expect = 6.230e-34
Identity = 61/113 (53.98%), Postives = 80/113 (70.80%), Query Frame = 0
Query:   71 RVGARTQEMWKDHVALTTEFPDASLPPGGHEASVTPDAVRRKRLVYRSKQRGWLEVDLLLGTWAERNVAGLSAADMDSYEDILNLETVDIFNFITGNADPPAFVDTPMLARLQ 183
            R  AR  +M  +H AL T+ P +SL PG  E  V  D +RRKRL+YRSKQRGWLEVDLL+GTWA  +V  LS+ ++D YE +LN ET+DIFN +TG   PP  V++P+L ++Q
Sbjct:   20 RAAARDHQMRSEHFALKTDVPVSSLAPG--ETRVDGDTIRRKRLIYRSKQRGWLEVDLLMGTWAVEHVPSLSSEELDQYEALLNRETIDIFNIVTGKDVPPPEVESPLLKKIQ 130          
BLAST of mRNA_Ecto-sp13_S_contig7540.18727.1 vs. uniprot
Match: A0A1V9ZJH1_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZJH1_9STRA)

HSP 1 Score: 126 bits (316), Expect = 2.160e-33
Identity = 62/120 (51.67%), Postives = 78/120 (65.00%), Query Frame = 0
Query:   64 LTPEEVSRVGARTQEMWKDHVALTTEFPDASLPPGGHEASVTPDAVRRKRLVYRSKQRGWLEVDLLLGTWAERNVAGLSAADMDSYEDILNLETVDIFNFITGNADPPAFVDTPMLARLQ 183
            +T  +  R   R  +M K+H A+  EFPDAS      + S+  D   RKR++YRSKQRGWLEVDLLLG WA  NV  L+  ++  YEDILN ET+DIFNFI+G    P  +DTPM+ RLQ
Sbjct:   34 ITEAQEMRAQERNAQMRKEHFAMKAEFPDASQ----GDVSIDADMANRKRVIYRSKQRGWLEVDLLLGRWASENVMSLTKEELSQYEDILNRETIDIFNFISGKDTVPPEIDTPMMKRLQ 149          
BLAST of mRNA_Ecto-sp13_S_contig7540.18727.1 vs. uniprot
Match: A0A1V9YDJ8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YDJ8_9STRA)

HSP 1 Score: 122 bits (306), Expect = 2.440e-32
Identity = 64/115 (55.65%), Postives = 77/115 (66.96%), Query Frame = 0
Query:   71 RVGARTQEMWKDHVALTTEFPDASLPPGGHEASVTPDAV--RRKRLVYRSKQRGWLEVDLLLGTWAERNVAGLSAADMDSYEDILNLETVDIFNFITGNADPPAFVDTPMLARLQ 183
            R   R  +M K+H A+ TEFP+AS      +  V  DAV   RKR++YRSKQRGWLEVDLLLG WA  NV  LS  ++  YEDILN ET+DIFNFI+G    P  +DTPM+ RLQ
Sbjct:    5 RAQQRNDQMRKEHFAVKTEFPEAS------QGDVVIDAVVANRKRVIYRSKQRGWLEVDLLLGRWASENVMSLSNEELRQYEDILNRETIDIFNFISGKDTVPPEIDTPMMKRLQ 113          
BLAST of mRNA_Ecto-sp13_S_contig7540.18727.1 vs. uniprot
Match: A0A2P4XKW9_9STRA (Succinate dehydrogenase subunit Emi5 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XKW9_9STRA)

HSP 1 Score: 121 bits (303), Expect = 2.300e-31
Identity = 61/120 (50.83%), Postives = 81/120 (67.50%), Query Frame = 0
Query:   64 LTPEEVSRVGARTQEMWKDHVALTTEFPDASLPPGGHEASVTPDAVRRKRLVYRSKQRGWLEVDLLLGTWAERNVAGLSAADMDSYEDILNLETVDIFNFITGNADPPAFVDTPMLARLQ 183
            ++ E+  +   R+  +  DH+A   +FP AS   G H+  V  D   RKR++YRSKQRGWLEVDLLLG WA +NV  LS  ++  YEDILN ET+DIFN+I+G +D P  +DTPM+ RLQ
Sbjct:   40 ISSEQAKKALERSASIRADHIATKGDFPSASH--GEHQ--VDSDEANRKRIIYRSKQRGWLEVDLLLGRWASQNVMQLSKDELKQYEDILNEETIDIFNYISGKSDVPEQLDTPMMKRLQ 155          
BLAST of mRNA_Ecto-sp13_S_contig7540.18727.1 vs. uniprot
Match: A0A2D4C6U7_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C6U7_PYTIN)

HSP 1 Score: 119 bits (297), Expect = 2.150e-30
Identity = 58/120 (48.33%), Postives = 79/120 (65.83%), Query Frame = 0
Query:   64 LTPEEVSRVGARTQEMWKDHVALTTEFPDASLPPGGHEASVTPDAVRRKRLVYRSKQRGWLEVDLLLGTWAERNVAGLSAADMDSYEDILNLETVDIFNFITGNADPPAFVDTPMLARLQ 183
            ++PE+  +   R  E+   HVA    +P  S      E  ++ D   RKR++YRSKQRGWLEVDLLLG+WA +NV  LSA ++  YEDILN ET+DIFN+I+G    PA +DTP++ R+Q
Sbjct:   46 ISPEQADKALRRGAEIRAQHVAAKDAYPSESQ----GEREISADEANRKRIIYRSKQRGWLEVDLLLGSWASQNVMALSAEELKQYEDILNQETIDIFNYISGKDAIPAELDTPIMKRIQ 161          
BLAST of mRNA_Ecto-sp13_S_contig7540.18727.1 vs. uniprot
Match: A0A329S672_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329S672_9STRA)

HSP 1 Score: 117 bits (293), Expect = 7.280e-30
Identity = 59/120 (49.17%), Postives = 80/120 (66.67%), Query Frame = 0
Query:   64 LTPEEVSRVGARTQEMWKDHVALTTEFPDASLPPGGHEASVTPDAVRRKRLVYRSKQRGWLEVDLLLGTWAERNVAGLSAADMDSYEDILNLETVDIFNFITGNADPPAFVDTPMLARLQ 183
            ++ E+  R   R+  +  DH A   +FP +S   G H   +  +   RKR++YRSKQRGWLEVDLLLG WA +NV  LS+ ++  YEDILN ET+DIFN+I+G +D P  +DTPM+ RLQ
Sbjct:   40 ISQEQAKRALERSAAIRADHFATKGDFPSSSQ--GDHLVDL--EEANRKRIIYRSKQRGWLEVDLLLGRWASQNVMQLSSDELQQYEDILNEETIDIFNYISGKSDVPQRLDTPMMKRLQ 155          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7540.18727.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G244_ECTSI5.800e-11694.57Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YN51_9STRA1.550e-4461.90Flavinator of succinate dehydrogenase-domain-conta... [more]
A0A4D9CR24_9STRA4.780e-3754.92Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A067CE16_SAPPC4.150e-3454.17Uncharacterized protein n=3 Tax=Saprolegnia TaxID=... [more]
A0A7S2R8F6_9STRA6.230e-3453.98Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A1V9ZJH1_9STRA2.160e-3351.67Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A1V9YDJ8_9STRA2.440e-3255.65Uncharacterized protein (Fragment) n=1 Tax=Thraust... [more]
A0A2P4XKW9_9STRA2.300e-3150.83Succinate dehydrogenase subunit Emi5 n=1 Tax=Phyto... [more]
A0A2D4C6U7_PYTIN2.150e-3048.33Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A329S672_9STRA7.280e-3049.17Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036714Flavinator of succinate dehydrogenase superfamilyGENE3D1.10.150.250coord: 106..186
e-value: 6.1E-21
score: 76.1
IPR036714Flavinator of succinate dehydrogenase superfamilySUPERFAMILY109910YgfY-likecoord: 108..183
IPR005631Flavinator of succinate dehydrogenasePFAMPF03937Sdh5coord: 111..182
e-value: 4.6E-21
score: 74.6
NoneNo IPR availablePANTHERPTHR12469:SF2SUCCINATE DEHYDROGENASE ASSEMBLY FACTOR 2, MITOCHONDRIALcoord: 103..183
NoneNo IPR availablePANTHERPTHR12469PROTEIN EMI5 HOMOLOG, MITOCHONDRIALcoord: 103..183
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 14..190
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 10..13
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..13
score: 0.532

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7540contigEcto-sp13_S_contig7540:3383..6282 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7540.18727.1mRNA_Ecto-sp13_S_contig7540.18727.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7540 3274..6282 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7540.18727.1 ID=prot_Ecto-sp13_S_contig7540.18727.1|Name=mRNA_Ecto-sp13_S_contig7540.18727.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=191bp
MMLAGMMAVVAQAARIPVATIRCCGGGGGAGRCYRRLSTAGGRAKDWEGE
RQPGSGGDELQRELTPEEVSRVGARTQEMWKDHVALTTEFPDASLPPGGH
EASVTPDAVRRKRLVYRSKQRGWLEVDLLLGTWAERNVAGLSAADMDSYE
DILNLETVDIFNFITGNADPPAFVDTPMLARLQVREWFGC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036714SDH_sf
IPR005631SDH