mRNA_Ecto-sp13_S_contig7531.18717.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7531.18717.1
Unique NamemRNA_Ecto-sp13_S_contig7531.18717.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7531.18717.1 vs. uniprot
Match: A0A6H5J6M6_9PHAE (SHQ1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6M6_9PHAE)

HSP 1 Score: 290 bits (741), Expect = 2.850e-90
Identity = 156/209 (74.64%), Postives = 163/209 (77.99%), Query Frame = 1 
Query:    7 NCSLQVIPGQHFPDLDLTTTLMQPRWTPKDLLKERPSGGDEGGAEGDVPASSFSGVEVVSSERYDVHDDGDDEAAGTNGRGSSVGADGSGGSRLPAGGAGVVGTDAGAAEARRAGGRGGGMGAEVLIRPPSYGFNDKFSGFFTSLREELREMIHLPDPDNTPPEARRGLRLEHEQAAFDPDRYLGDLFAEEEDPLLTEALAFEPHWRLR 633
            N ++ VIPGQHFPDLDLTTTLMQPRWTPKDLLKERPSGGDEGGAEGDVP SSFSGVEVVSSERYD+H DGDDEAAG                                          GG+G++VLIRPPSYGFNDKFSGFFTSLR+ELREMIHLPDPDNTPPEARRGLRLEHEQAAFDPDRYLGDLFAEEEDPLLTEALAFEPHWRLR
Sbjct:   75 NGTITVIPGQHFPDLDLTTTLMQPRWTPKDLLKERPSGGDEGGAEGDVPVSSFSGVEVVSSERYDIHGDGDDEAAGNXXXXXXXXXXXXXXXLXXXXXXXXXXXXXXXXXXXXXXXXXGGVGSKVLIRPPSYGFNDKFSGFFTSLRDELREMIHLPDPDNTPPEARRGLRLEHEQAAFDPDRYLGDLFAEEEDPLLTEALAFEPHWRLR 283
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BLAST of mRNA_Ecto-sp13_S_contig7531.18717.1 vs. uniprot
Match: D8LCQ4_ECTSI (SHQ1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCQ4_ECTSI)

HSP 1 Score: 287 bits (734), Expect = 1.960e-85
Identity = 161/215 (74.88%), Postives = 164/215 (76.28%), Query Frame = 1 
Query:    1 FTNCSLQVIPGQHFPDLDLTTTLMQPRWTPKDLLKERPSGGDEGGAEGDVPASSFSGVEVVSSERYDVHDDGDDEAAGTNGRGSSVGADGSGGSRLPAGGAGVVGTDAGAAEARRAGGRGG-GMGAEVLIRPPSYGFNDKFSGFFTSLREELREMIHLPDPDNTPPEARRGLRLEHEQAAFDPDRYLGDLFAEEEDPLLTEALAFEPHWRLRLRA 642
            F    L+VIPGQHFPDLDLTTTLMQPRWTPKDLLKERPSGGDEGGAEG VPASSFSGVEVVSSERYDVHDDG                   GGSRLPAG                       G+GAEVLIRPPSYGFNDKFSGFFTSLREELREMIHLP+PD TP EARRGLRLEHEQAAFDPDRYLGDLF EEEDPLLTEALAFEPHWRLRL A
Sbjct:  483 FKEKQLKVIPGQHFPDLDLTTTLMQPRWTPKDLLKERPSGGDEGGAEGVVPASSFSGVEVVSSERYDVHDDGXXXXXXXXXXXXXXXXXXGGGSRLPAGXXXXXXXXXXXXXXXXXXXXXXXGVGAEVLIRPPSYGFNDKFSGFFTSLREELREMIHLPNPDKTPAEARRGLRLEHEQAAFDPDRYLGDLFTEEEDPLLTEALAFEPHWRLRLGA 697
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BLAST of mRNA_Ecto-sp13_S_contig7531.18717.1 vs. uniprot
Match: A0A835YXH0_9STRA (SHQ1 protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXH0_9STRA)

HSP 1 Score: 111 bits (277), Expect = 6.910e-24
Identity = 78/198 (39.39%), Postives = 89/198 (44.95%), Query Frame = 1 
Query:   31 GQHFPDLDLTTTLMQPRWTPKDLLKERPSGGDEGGAEGDVPASSFSGVEVVSSERYDVHDDGDDEAAGTNGRGSSVGADGSGGSRLPAGGAGVVGTDAGAAEARRAGGRGGGMGAEVLIRPPSYGFNDKFSGFFTSLREELREMIHLPDPDNTPPEARRGLRLEHEQAAFDPDRYLGDLFAEEEDPLLTEALAFEPHW 624
            GQHFPDLDLT+ L+QP+W P   L +R +   E  AEG        G+EV++S       D DDE                                                        PSYGFN  FSGFF  LREELREM  LPDPD TP   RR  R   E  AFD  RYLGDL   EED + TEALA++P W
Sbjct:   89 GQHFPDLDLTSALLQPKWDPSKELADRAA---ERAAEGGT------GIEVLASSTATDAPDSDDEXXXXXXXXXXX--------------------------XXXXXXXXXXXXXXXXXARPSYGFNQAFSGFFRGLREELREMAQLPDPDATPEHERRAQREHAESLAFDEGRYLGDLLGAEEDVIFTEALAYQPDW 251
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BLAST of mRNA_Ecto-sp13_S_contig7531.18717.1 vs. uniprot
Match: A0A6A3SJB0_9STRA (CS domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3SJB0_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 4.100e-11
Identity = 37/87 (42.53%), Postives = 51/87 (58.62%), Query Frame = 1 
Query:  367 MGAEVLIRPPSYGFNDKFSGFFTSLREELREMIHLPDPDNTPPEARRGLRLEHEQAAFDPDRYLGDLFAEEEDPLLTEALAFEPHWR 627
            +G  V    PSYGFN+ +S FF     E+ E++ LPDP++  PE RR LR   E+  FD +RYL D   + +D     A+A+EP WR
Sbjct:  198 VGVRVTELAPSYGFNNAYSDFFRVWHGEVSEILSLPDPEHMQPEQRRTLREAAEEEQFDVERYLMDFANQGDDMYFELAMAYEPFWR 284
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BLAST of mRNA_Ecto-sp13_S_contig7531.18717.1 vs. uniprot
Match: A0A7S3V226_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3V226_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 2.660e-10
Identity = 30/78 (38.46%), Postives = 49/78 (62.82%), Query Frame = 1 
Query:  400 YGFNDKFSGFFTSLREELREMIHLPDPDNTPPEARRGLRLEHEQAAFDPDRYLGDLFAEEEDPLLTEALAFEPHWRLR 633
            YGFN   + FF +++++  E++ +  P+ T  E R  LR   E   FD +R++GDLF  ++DP+ T AL F PHW+++
Sbjct:  142 YGFNRSMTNFFHAIQDDFPELVDIEHPETTKIEERSILRHAREDEDFDEERFIGDLFGADDDPIYTSALKFLPHWKVK 219
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BLAST of mRNA_Ecto-sp13_S_contig7531.18717.1 vs. uniprot
Match: A0A8C5R386_9ANUR (Protein SHQ1 homolog n=1 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5R386_9ANUR)

HSP 1 Score: 68.9 bits (167), Expect = 1.460e-9
Identity = 36/76 (47.37%), Postives = 45/76 (59.21%), Query Frame = 1 
Query:  397 SYGFNDKFSGFFTSLREELREMIHLPDPDNTPPEARRGLRLEHEQAAFDPDRYLGDLFAEEEDPLLTEALAFEPHW 624
            SYGF +  SG F+ L++EL ++I L DPD TP   R   RL  E A FDPD YL DLF   ED  +   L ++P W
Sbjct:  143 SYGFGNLRSGVFSRLQDELNDIIDLRDPDTTPASDRTQKRLAAEDAKFDPDHYLADLF---EDEAIQRLLMYQPWW 215
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BLAST of mRNA_Ecto-sp13_S_contig7531.18717.1 vs. uniprot
Match: UPI0014031685 (protein SHQ1 homolog isoform X1 n=2 Tax=Amblyraja radiata TaxID=386614 RepID=UPI0014031685)

HSP 1 Score: 67.8 bits (164), Expect = 3.680e-9
Identity = 38/84 (45.24%), Postives = 48/84 (57.14%), Query Frame = 1 
Query:  376 EVLIRPPSYGFNDKFSGFFTSLREELREMIHLPDPDNTPPEARRGLRLEHEQAAFDPDRYLGDLFAEEEDPLLTEALAFEPHWR 627
            +VL    SYGF +  SG F  L+ EL ++I L +PD+T P  RR  RL  E+A FD D YL DLF   ED  +   L  +P WR
Sbjct:  137 KVLNSDSSYGFGNLRSGVFQRLQHELSDVIDLKEPDSTTPVERRLKRLAAEEAKFDSDHYLADLF---EDDAIRHLLKHQPWWR 217
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BLAST of mRNA_Ecto-sp13_S_contig7531.18717.1 vs. uniprot
Match: T1FSH2_HELRO (Protein SHQ1 homolog n=1 Tax=Helobdella robusta TaxID=6412 RepID=T1FSH2_HELRO)

HSP 1 Score: 64.3 bits (155), Expect = 2.500e-8
Identity = 34/82 (41.46%), Postives = 47/82 (57.32%), Query Frame = 1 
Query:  379 VLIRPPSYGFNDKFSGFFTSLREELREMIHLPDPDNTPPEARRGLRLEHEQAAFDPDRYLGDLFAEEEDPLLTEALAFEPHW 624
            V I+ P YGF    SG F +L+EEL +++ L + D    E RR +R + E AAFD + YL DL+   E   + E +AF P W
Sbjct:  161 VSIKKPMYGFGHLRSGVFKTLKEELDDVVDLKNVDGVDEEMRRKMRTDVEDAAFDEEHYLADLY---ERGAIDELIAFAPDW 239
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BLAST of mRNA_Ecto-sp13_S_contig7531.18717.1 vs. uniprot
Match: UPI001B7EF5D9 (protein SHQ1 homolog isoform X1 n=2 Tax=Carcharodon carcharias TaxID=13397 RepID=UPI001B7EF5D9)

HSP 1 Score: 64.7 bits (156), Expect = 3.910e-8
Identity = 37/86 (43.02%), Postives = 47/86 (54.65%), Query Frame = 1 
Query:  367 MGAEVLIRPPSYGFNDKFSGFFTSLREELREMIHLPDPDNTPPEARRGLRLEHEQAAFDPDRYLGDLFAEEEDPLLTEALAFEPHW 624
            +G  V+     YGF +  SG F  L+ EL E+I L +PD+T    RR  RL  E+A FD D YL DLF   ED  +   L +EP W
Sbjct:  151 LGGNVINWSCFYGFGNLRSGVFKRLQHELSEVIDLKEPDSTTMVERRQKRLAAEEAKFDSDHYLADLF---EDDAIQHLLKYEPWW 233
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BLAST of mRNA_Ecto-sp13_S_contig7531.18717.1 vs. uniprot
Match: A0A482RD99_9ARCH (SHQ1 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RD99_9ARCH)

HSP 1 Score: 64.7 bits (156), Expect = 4.030e-8
Identity = 35/92 (38.04%), Postives = 51/92 (55.43%), Query Frame = 1 
Query:  370 GAEVLIRPPSYGFNDKFSG-FFTSLREELREMIHLPDPDNTPPEARRGLRLEHEQAAFDPDRYLGDLFAEEEDPLLTEALAFEPHWRLRLRA 642
            G + +  P  +GF   FS  FF S+RE+++E++ LP+P  T P  RR  R   E   FD +  + D    EED +  EA+A  PHW+L  +A
Sbjct:  249 GVQDITPPVRFGFMRSFSADFFKSVREDIQELLALPEPGTTLPWERRAARELEENDDFDAEHIVADAAHGEEDDIFREAVAHVPHWQLAAQA 340
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7531.18717.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
A0A6H5J6M6_9PHAE2.850e-9074.64SHQ1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LCQ4_ECTSI1.960e-8574.88SHQ1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A835YXH0_9STRA6.910e-2439.39SHQ1 protein-domain-containing protein n=1 Tax=Tri... [more]
A0A6A3SJB0_9STRA4.100e-1142.53CS domain-containing protein n=5 Tax=Phytophthora ... [more]
A0A7S3V226_9STRA2.660e-1038.46Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A8C5R386_9ANUR1.460e-947.37Protein SHQ1 homolog n=1 Tax=Leptobrachium leishan... [more]
UPI00140316853.680e-945.24protein SHQ1 homolog isoform X1 n=2 Tax=Amblyraja ... [more]
T1FSH2_HELRO2.500e-841.46Protein SHQ1 homolog n=1 Tax=Helobdella robusta Ta... [more]
UPI001B7EF5D93.910e-843.02protein SHQ1 homolog isoform X1 n=2 Tax=Carcharodo... [more]
A0A482RD99_9ARCH4.030e-838.04SHQ1 domain-containing protein n=1 Tax=archaeon Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7531contigEcto-sp13_S_contig7531:3..2313 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score295.0
Seed ortholog evalue3.5e-77
Seed eggNOG ortholog2880.D8LCQ4
Preferred nameSHQ1
Model size816
KEGG koko:K08597,ko:K14764
Hectar predicted targeting categoryother localisation
GOsGO:0000491,GO:0000493,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0010941,GO:0010942,GO:0016043,GO:0016070,GO:0016072,GO:0019219,GO:0019222,GO:0022607,GO:0022613,GO:0022618,GO:0031323,GO:0031324,GO:0031974,GO:0031981,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042981,GO:0043065,GO:0043067,GO:0043068,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044085,GO:0044087,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045934,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051082,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065003,GO:0065007,GO:0070013,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090069,GO:0090071,GO:0090304,GO:1901360,GO:2000232,GO:2000233
Exons4
EggNOG free text desc.box H/ACA snoRNP assembly
EggNOG OGsKOG3247@1,KOG3247@2759
EC3.4.22.68
Cds size816
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002,ko03009,ko04121
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464021.5904574-CDS-Ecto-sp13_S_contig7531:2..3101681464021.5904574-CDS-Ecto-sp13_S_contig7531:2..310Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7531 3..310 -
1681464021.602838-CDS-Ecto-sp13_S_contig7531:616..7071681464021.602838-CDS-Ecto-sp13_S_contig7531:616..707Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7531 617..707 -
1681464021.6130023-CDS-Ecto-sp13_S_contig7531:1289..16021681464021.6130023-CDS-Ecto-sp13_S_contig7531:1289..1602Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7531 1290..1602 -
1681464021.6317387-CDS-Ecto-sp13_S_contig7531:2209..23131681464021.6317387-CDS-Ecto-sp13_S_contig7531:2209..2313Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7531 2210..2313 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7531.18717.1prot_Ecto-sp13_S_contig7531.18717.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7531 3..2313 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7531.18717.1

>prot_Ecto-sp13_S_contig7531.18717.1 ID=prot_Ecto-sp13_S_contig7531.18717.1|Name=mRNA_Ecto-sp13_S_contig7531.18717.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=272bp
FTNCSLQVIPGQHFPDLDLTTTLMQPRWTPKDLLKERPSGGDEGGAEGDV
PASSFSGVEVVSSERYDVHDDGDDEAAGTNGRGSSVGADGSGGSRLPAGG
AGVVGTDAGAAEARRAGGRGGGMGAEVLIRPPSYGFNDKFSGFFTSLREE
LREMIHLPDPDNTPPEARRGLRLEHEQAAFDPDRYLGDLFAEEEDPLLTE
ALAFEPHWRLRLRAQQQRHRRRQRRRGQAQEQEKRNRREEEDRRQGVDGG
GGGASHAGSGGGEGAPEDEALL
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mRNA from alignment at Ecto-sp13_S_contig7531:3..2313-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7531.18717.1 ID=mRNA_Ecto-sp13_S_contig7531.18717.1|Name=mRNA_Ecto-sp13_S_contig7531.18717.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2311bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7531:3..2313- (Ectocarpus species13 EcNAP12_S_4_19m)
TTCACGAACTGTTCTTTGCAGGTGATTCCGGGGCAACATTTCCCCGACCT
CGATCTAACGACGACTCTCATGCAACCCCGCTGGACACCCAAGGACTTGC
TGAAGTGAGGATTTCGTGCCTGGCCACCCGTTCGTTGTCAGTGCTACATC
CGTTGTGGTTGTCGTGTGTCGTTGACGTTGTATGTGTGGTTCGATTGGTG
CTGATAGGGGTCTGCGTCTCTGTGGACACACATAAGGTTTGTTGCGTTTT
ATGCACATGAGTGATTTTGTATAGTTGTTGGTGGTCCATGGGGTCGGTCA
TTCGTATCTTGCGGCGACGTTCCCGGTGGCATTGTTGTCTTTGTCGGGGC
TACGGTTGCGGTCTTTCTACGTCGGAGACTTCTCCTGCTGTACCTACATT
TGCTATTTAGTCGGGACCGGGTGTGGATAACTTGACGTGGCTACACGACT
TGGCTTATGTCACCCGCTTCTCGGCCGCACGCGCGCACACAGTGCCCTCC
CCTCTCCGCCCGATACGTCTCCGCCTTCGCGTCGCCCTCCATTGTGTTTC
TCATTCTCGCGTTGTGGTACGAGTTCTCGCCCCTGCGTTGTGTACGTTTC
CCCCCCTTGTTTTCTCTTCCTCGGCAATGTGCATACGCAGTGCCCCCCCC
CCCTCCGCCGTTAGTTGACAGACACCCTCTCGTTTCCGACCCCTCTCCCT
CGCGCAACAAGAGAGCGTCCGAGCGGGGGAGACGAAGGCGGGGCCGAGGG
CGACGTGCCTGCCTCCTCCTTCTCCGGCGTCGAGGTGGTCTCGTCGGAGC
GCTACGATGTCCATGACGACGGCGACGATGAAGCCGCGGGCACCAACGGT
AGGGGTAGCAGTGTTGGTGCAGATGGCAGTGGTGGTTCACGCCTCCCTGC
TGGGGGCGCCGGCGTGGTGGGAACCGACGCCGGCGCAGCGGAAGCCCGAC
GAGCGGGAGGGAGGGGCGGCGGGATGGGCGCTGAGGTCTTGATACGGCCT
CCGAGTTACGGGTTCAACGATAAGGTGCTCCGGCCTGGCTCTCCTCTAGA
TGGTAGCTTTTTGTCGATACGATTCTCCCTCTGTGGGTGTGGCTGGTGCG
AATGGCACCATGGAATGGTAAATTTGCAGCGTATCACCGTGTAAAGCATC
ACTCCGCGCAGATGTGAAAGCACCGCCCAGCCCAGTGTGCTGGTCGACGG
CTAAGTAGGAACAAGGCGCAGCCAGACAAGAAGTAGCTTTATCACGGCTT
GGGAGAAGCTGTTCCTCTCCCCAAAGCTCGCCACTGCGGCATTACACCCT
TTGGGTTCCATCGCCCCGCCAGCTGAAAAGTTACCCTCATGGTGTCGGCT
CCCCCCTGTGGAGACCAAACGAGTACTCAACCGTATTGTGTTTTTTTTAG
CGCTTCCGCATTTGTCGTGCCTGTCTGGCTCGACAAAAAGAAGCTCGTGC
GCGGGTGCCGATTACTATTTTCTTCGCGCGGAGCACCAACGGCCCGTGTC
ACCACGCATGGCAAGCTTTGAAGCGCTTTCACCATCGAGTCGGGCAATCC
GGCGTTTTGTCTGCTCGCCTTCTTCCTTGTGTTCGCCCGATTTTCACTCT
CGACAGTTCAGCGGTTTTTTCACGTCTCTGAGGGAAGAGCTTCGTGAGAT
GATTCATCTACCGGACCCAGACAATACTCCTCCTGAGGCCAGGCGAGGTA
CTCCAGACGCTCCTCTACAGTACACCACTACCCGGTTGTTGTTGTTGGTG
GTGTTGGGTGGTGTGGTGTTGTTGTTGCTGTTTCGGTTGGGTTATGTTGA
TGTTACTGTTGATGAGGATGTTATGGTTCTTTGTTGTTGACGTTGGTGCT
GAGGTAAGTGCTGCTGTCCGTGTTGGCGTTGTTTCGGCTCTCCCTCTCTC
TGTCATTTCTTCTCCGTCTGTCCCTCTCATCTCCCTCCCTCCCTCCCTCC
CTCTGTTCCTCTCGTTCTCCCTACGTGCGTGTCCGCCTGCCCGCCCCCCG
TAGGCCTTCGACTTGAGCACGAGCAGGCCGCCTTCGACCCGGACCGCTAC
CTCGGCGACCTCTTCGCCGAGGAGGAAGACCCGCTCCTCACGGAAGCGCT
GGCGTTCGAGCCCCACTGGCGGCTGAGGCTCCGAGCACAGCAGCAGCGGC
ATCGTCGTCGACAACGGCGGAGAGGGCAAGCGCAAGAGCAAGAGAAGCGA
AACAGGCGGGAGGAAGAGGATAGGCGGCAGGGGGTTGACGGAGGAGGCGG
AGGAGCGTCGCATGCCGGGAGTGGTGGAGGAGAGGGAGCTCCAGAAGACG
AGGCTTTGCTG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7531:3..2313-

>mRNA_Ecto-sp13_S_contig7531.18717.1 ID=mRNA_Ecto-sp13_S_contig7531.18717.1|Name=mRNA_Ecto-sp13_S_contig7531.18717.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=816bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7531:3..2313- (Ectocarpus species13 EcNAP12_S_4_19m)
TTCACGAACTGTTCTTTGCAGGTGATTCCGGGGCAACATTTCCCCGACCT
CGATCTAACGACGACTCTCATGCAACCCCGCTGGACACCCAAGGACTTGC
TGAAAGAGCGTCCGAGCGGGGGAGACGAAGGCGGGGCCGAGGGCGACGTG
CCTGCCTCCTCCTTCTCCGGCGTCGAGGTGGTCTCGTCGGAGCGCTACGA
TGTCCATGACGACGGCGACGATGAAGCCGCGGGCACCAACGGTAGGGGTA
GCAGTGTTGGTGCAGATGGCAGTGGTGGTTCACGCCTCCCTGCTGGGGGC
GCCGGCGTGGTGGGAACCGACGCCGGCGCAGCGGAAGCCCGACGAGCGGG
AGGGAGGGGCGGCGGGATGGGCGCTGAGGTCTTGATACGGCCTCCGAGTT
ACGGGTTCAACGATAAGTTCAGCGGTTTTTTCACGTCTCTGAGGGAAGAG
CTTCGTGAGATGATTCATCTACCGGACCCAGACAATACTCCTCCTGAGGC
CAGGCGAGGCCTTCGACTTGAGCACGAGCAGGCCGCCTTCGACCCGGACC
GCTACCTCGGCGACCTCTTCGCCGAGGAGGAAGACCCGCTCCTCACGGAA
GCGCTGGCGTTCGAGCCCCACTGGCGGCTGAGGCTCCGAGCACAGCAGCA
GCGGCATCGTCGTCGACAACGGCGGAGAGGGCAAGCGCAAGAGCAAGAGA
AGCGAAACAGGCGGGAGGAAGAGGATAGGCGGCAGGGGGTTGACGGAGGA
GGCGGAGGAGCGTCGCATGCCGGGAGTGGTGGAGGAGAGGGAGCTCCAGA
AGACGAGGCTTTGCTG
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