prot_Ecto-sp13_S_contig7504.18698.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7504.18698.1
Unique Nameprot_Ecto-sp13_S_contig7504.18698.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length215
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7504.18698.1 vs. uniprot
Match: D7FHL8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHL8_ECTSI)

HSP 1 Score: 258 bits (658), Expect = 2.260e-81
Identity = 145/158 (91.77%), Postives = 147/158 (93.04%), Query Frame = 0 
Query:   45 TFDRCRAADACRRCSLDVTTTTSDANERWQRQGRQGQGDSRGQRRGRRSSELWGGKVGKLASSKPSEDFAGEGRADGGSTTAGVAQGREALGGGGGGSVASVNQRQGAVPPSEGVLGADSPVTSAAVAEAGRGKDKDSLEWSEVGTECQKRVYICTNR 202
            TF+RCRAADACRRCSLDVT TTSDANERWQRQ RQ QG SRGQRRGRRSSELW GKVGKLASSKPSEDFAGEGRADGGSTTAGVAQGREALGGGG  S AS+NQRQGA P SE VLGADSPVTSAAVAEAGRGKDKDSLEWSEVGTECQKRVYICTNR
Sbjct:   45 TFNRCRAADACRRCSLDVTPTTSDANERWQRQERQWQGGSRGQRRGRRSSELWWGKVGKLASSKPSEDFAGEGRADGGSTTAGVAQGREALGGGG--SAASMNQRQGA-PASEEVLGADSPVTSAAVAEAGRGKDKDSLEWSEVGTECQKRVYICTNR 199
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BLAST of mRNA_Ecto-sp13_S_contig7504.18698.1 vs. uniprot
Match: A0A6H5JBU1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBU1_9PHAE)

HSP 1 Score: 174 bits (440), Expect = 3.690e-52
Identity = 102/130 (78.46%), Postives = 108/130 (83.08%), Query Frame = 0 
Query:    1 MTLKMIAAKKSAGGIVVFLAASCSKAVSFMASPASTTSLAAASWTFDRCRAADACRRCSLDVTTTTSDANERWQRQGRQGQGDSRGQRRGRRSSELWGGKVGKLASSKPSEDFAGEGRADGGSTTAGVAQ 130
            MTLKMIAAKKSAG +VVFLAASCSKAVSFM SP+ST+++AA SWTF+RCRAADACRRCSLDVTTTTSDANERW                 RRSSELWGGKVGKLASSKPSEDFA EGRADGGSTTAG AQ
Sbjct:    1 MTLKMIAAKKSAGAVVVFLAASCSKAVSFMPSPSSTSAVAA-SWTFNRCRAADACRRCSLDVTTTTSDANERWXXXXXXXXXXXXXXXXXRRSSELWGGKVGKLASSKPSEDFAREGRADGGSTTAGAAQ 129
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7504.18698.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FHL8_ECTSI2.260e-8191.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JBU1_9PHAE3.690e-5278.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 41..214
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..40
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 11..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..40
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..10
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..23
score: 5.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7504contigEcto-sp13_S_contig7504:4135..7074 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7504.18698.1mRNA_Ecto-sp13_S_contig7504.18698.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7504 4135..7074 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7504.18698.1 ID=prot_Ecto-sp13_S_contig7504.18698.1|Name=mRNA_Ecto-sp13_S_contig7504.18698.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=215bp
MTLKMIAAKKSAGGIVVFLAASCSKAVSFMASPASTTSLAAASWTFDRCR
AADACRRCSLDVTTTTSDANERWQRQGRQGQGDSRGQRRGRRSSELWGGK
VGKLASSKPSEDFAGEGRADGGSTTAGVAQGREALGGGGGGSVASVNQRQ
GAVPPSEGVLGADSPVTSAAVAEAGRGKDKDSLEWSEVGTECQKRVYICT
NRQGGGGGGAARDF*
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