mRNA_Ecto-sp13_S_contig7446.18628.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7446.18628.1 vs. uniprot
Match: D7FIZ5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIZ5_ECTSI) HSP 1 Score: 454 bits (1167), Expect = 4.510e-159 Identity = 229/248 (92.34%), Postives = 239/248 (96.37%), Query Frame = 1
Query: 1 MEHRSAVGLFLSLAVHLNRPSAALNTRFPIGRRVRALHTPTEAAADAADTSSYIVDVDANLLHADLSDDIDHHIQVASSVGVKQFVVPGSTVEDSRGSLELARQKPNVVFSTAGVHPYHVQGCGSLEDAMASIATLAATKEARCVGECGLDYSEGFPAAELQLPWFERQVELACKLKKPLFLHERAAFDDFSEVLQRYDASHGLPPCLVHCFTGSEEELAAYIEMGFFVSVAGGICREKSGAALRAAV 744
MEHRSA+GLFLSLAVHLNRP+AALNTR PIGR VR LHT AAADA ++SSYIVDVDANLLHADLS+DIDHHIQ+ASSVGVKQFVVPGSTVEDSRGSLELAR+KPNVVFSTAGVHPYHVQGCGSLEDAMASIATLAAT+EARCVGECGLDYSEGFPAAELQLPWFERQVELACKLKKPLFLHERAAF DFSEVL+RYDASHGLPPCLVHCFTGSEEEL AYI+MGFFVSVAGGICREKSGAALRAAV
Sbjct: 25 MEHRSAIGLFLSLAVHLNRPAAALNTRLPIGRGVRGLHTT--AAADAGESSSYIVDVDANLLHADLSNDIDHHIQIASSVGVKQFVVPGSTVEDSRGSLELARRKPNVVFSTAGVHPYHVQGCGSLEDAMASIATLAATEEARCVGECGLDYSEGFPAAELQLPWFERQVELACKLKKPLFLHERAAFVDFSEVLRRYDASHGLPPCLVHCFTGSEEELTAYIDMGFFVSVAGGICREKSGAALRAAV 270
BLAST of mRNA_Ecto-sp13_S_contig7446.18628.1 vs. uniprot
Match: A0A835Z870_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z870_9STRA) HSP 1 Score: 214 bits (546), Expect = 3.040e-65 Identity = 106/193 (54.92%), Postives = 142/193 (73.58%), Query Frame = 1
Query: 160 IVDVDANLLHADLSDDIDHHIQVASSVGVKQFVVPGSTVEDSRGSLELARQKPNVVFSTAGVHPYHVQGCGSLEDAMASIATLAATKEARCVGECGLDYSEGFPAAELQLPWFERQVELACKLKKPLFLHERAAFDDFSEVLQRYDASH-GLPPCLVHCFTGSEEELAAYIEMGFFVSVAGGICREKSGAALR 735
+VDVDANL H L+ D HI +A VGV+Q VVPGS + DS+ +L+LAR+ P +++ TAG+HPY V+ CG LE AM+++A L A CVGECGLD+SEGFP ELQLP+FERQV+LA + +KPLFLHER A F++VL+ +A+ GLPPCLVHCFTG+ EL+ Y++MGF++ V G + ++ G LR
Sbjct: 50 LVDVDANLCHEALAADAAVHIDMARDVGVRQMVVPGSDLADSKAALDLARKYPGILYPTAGIHPYCVKDCGELEPAMSTLAELLADPLFTCVGECGLDFSEGFPEPELQLPFFERQVQLAVETRKPLFLHERLASRPFTDVLRAANAAPPGLPPCLVHCFTGTGSELSVYLQMGFYIGVTGFLLKKPHGNVLR 242
BLAST of mRNA_Ecto-sp13_S_contig7446.18628.1 vs. uniprot
Match: K3WCX9_GLOUD (Uncharacterized protein n=2 Tax=Globisporangium ultimum TaxID=2052682 RepID=K3WCX9_GLOUD) HSP 1 Score: 193 bits (490), Expect = 3.280e-57 Identity = 91/197 (46.19%), Postives = 137/197 (69.54%), Query Frame = 1
Query: 160 IVDVDANLLHADLSDDIDHHIQVASSVGVKQFVVPGSTVEDSRGSLELARQKPNVVFSTAGVHPYHVQGCGSLEDAMASIATLAATKEARCVGECGLDYSEGFPAAELQLPWFERQVELACKLKKPLFLHERAAFDDFSEVLQRYDASHG--LPPCLVHCFTGSEEELAAYIEMGFFVSVAGGICREKSGAALRAAV 744
+ D D NL H D+ D++ H+Q ++ GV + +VPG+T+E+S+ +++L R+ P +F TAGVHPYH + E+ +A+++ LA +E R VGECGLDYS FP A+LQ WF+ Q++LAC+L+KPLFLHER A DDF ++++ PP +VHCFTG+E+EL Y+ GF++ + G IC+++ GA+LRA V
Sbjct: 19 LFDFDCNLTHDDMVADVEMHMQHGAAAGVTEMLVPGATLEESQAAIDLCRKYPTQLFPTAGVHPYHALALPTPEE-LATLSDLAQLEECRAVGECGLDYSPSFPDAKLQQEWFKVQLDLACRLQKPLFLHERLAHDDFMALIKQCQQKFNDYFPPVVVHCFTGNEQELREYVRQGFYIGITGFICKKEHGASLRAMV 214
BLAST of mRNA_Ecto-sp13_S_contig7446.18628.1 vs. uniprot
Match: A0A662WGG9_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WGG9_9STRA) HSP 1 Score: 185 bits (470), Expect = 1.140e-53 Identity = 102/217 (47.00%), Postives = 138/217 (63.59%), Query Frame = 1
Query: 109 LHTPTEAAADAADTSSYI--VDVDANLLHADLSDDIDHHIQVASSVGVKQFVVPGSTVEDSRGSLELARQKPNVVFSTAGVHPYHVQGCGSLEDAMASIATLAATKEARCVGECGLDYSEGFPAAELQLPWFERQVELACKLKKPLFLHERAAFDDFSEVL----QRYDASHGLPPCLVHCFTGSEEELAAYIEMG--FFVSVAGGICREKSGAALR 735
L T A DT + D D NL H DL D+ + A+SVGV + +VPGST+E+S+ ++EL RQ P +F TAGVHPYH + E+ +A++ L E R VGECGLDYS GFPA ELQ WF Q+ LAC+L+KPLFLHER A +DF +++ +++D PP +VHCFTG+E EL AY+ G +++ V G IC+++ GAALR
Sbjct: 45 LKNSTSMKPKATDTPPLLELFDFDCNLTHDDLKGDVAAVMTQAASVGVTEMLVPGSTLEESQRAIELCRQYPTQLFPTAGVHPYHALASPTTEE-LATLRDLLELGEVRAVGECGLDYSPGFPAPELQKKWFVEQLALACRLRKPLFLHERLAHEDFLKLVDDATKQFDGY--FPPAVVHCFTGNERELQAYLARGDDWYIGVTGFICKKQHGAALR 258
BLAST of mRNA_Ecto-sp13_S_contig7446.18628.1 vs. uniprot
Match: A0A484DT43_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DT43_BRELC) HSP 1 Score: 180 bits (457), Expect = 1.370e-52 Identity = 97/204 (47.55%), Postives = 134/204 (65.69%), Query Frame = 1
Query: 145 DTSSYIVDVDANLLHADLSDDIDHHIQVASSVGVKQFVVPGSTVEDSRGSLELARQKPNVVFSTAGVHPYHVQGCGSLEDAMASIATLAATKEARCVGECGLDYSEGFPAAELQLPWFERQVELACKLKKPLFLHERAAFDDFSEVLQR-YDASHG-LPPCLVHCFTGSEEELAAYIEMG--FFVSVAGGICREKSGAALRAAV 744
D S + D+D NL H DL D++ I+ + +VGVK+ +VPGS +EDS+ +EL RQ P +F TAGVHPY + S E ++++ L + R VGECGLDYS GFP LQ+ WF Q+ +AC +KKPLFLH+R A DF+ ++ R + S+G PP +VHCFTG+EEEL AYI G +++ + G IC+ K GAAL+ V
Sbjct: 43 DPSLELFDIDCNLTHDDLRDNVIALIEQSVAVGVKEMLVPGSNIEDSQRCIELCRQHPTQLFPTAGVHPYFARTTPS-EVELSALKRLVEIDDVRAVGECGLDYSPGFPERILQMKWFAEQLMMACAIKKPLFLHQRLAHQDFTSLIDRTIEESNGYFPPAVVHCFTGNEEELKAYIARGDDWYIGITGYICK-KEGAALKGMV 244
BLAST of mRNA_Ecto-sp13_S_contig7446.18628.1 vs. uniprot
Match: A0A075LY60_PHYSO (TatD related DNase n=1 Tax=Phytophthora sojae TaxID=67593 RepID=A0A075LY60_PHYSO) HSP 1 Score: 181 bits (460), Expect = 2.970e-52 Identity = 97/218 (44.50%), Postives = 141/218 (64.68%), Query Frame = 1
Query: 97 RVRALHTPTEAAADAADTSSY-IVDVDANLLHADLSDDIDHHIQVASSVGVKQFVVPGSTVEDSRGSLELARQKPNVVFSTAGVHPYHVQGCGSLEDAMASIATLAATKEARCVGECGLDYSEGFPAAELQLPWFERQVELACKLKKPLFLHERAAFDDFSEVLQRYDASHG--LPPCLVHCFTGSEEELAAYIEMG--FFVSVAGGICREKSGAALR 735
+V++ ++A++ A+T + D D NL H DL D++ +Q A +VGVK+ +VPG+T+++S+ ++EL RQ P +F TAGVHPY+ + + ++ + ++ L E R VGECGLDYS FP E Q WF Q+ LAC+LKKPLFLHER A DF +++ A G PP +VHCFTG+EEEL AY+ G +++ V G IC+ K GAAL+
Sbjct: 36 KVKSAKMVQKSASEPAETVDLELFDFDCNLTHEDLRDNVAALMQQAEAVGVKEMLVPGATIDESQRAVELCRQHPTKLFPTAGVHPYNARAMPTQQE-LTTLKGLMELPEVRAVGECGLDYSPSFPEPEFQKKWFAEQLLLACELKKPLFLHERLAHQDFIQLIDEATAKAGGYFPPAVVHCFTGNEEELKAYVARGDDWYIGVTGFICK-KQGAALQ 251
BLAST of mRNA_Ecto-sp13_S_contig7446.18628.1 vs. uniprot
Match: A0A6A3Y5D0_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3Y5D0_9STRA) HSP 1 Score: 181 bits (459), Expect = 4.190e-52 Identity = 95/205 (46.34%), Postives = 135/205 (65.85%), Query Frame = 1
Query: 133 ADAADTSSYIVDVDANLLHADLSDDIDHHIQVASSVGVKQFVVPGSTVEDSRGSLELARQKPNVVFSTAGVHPYHVQGCGSLEDAMASIATLAATKEARCVGECGLDYSEGFPAAELQLPWFERQVELACKLKKPLFLHERAAFDDFSEVLQRYDASHG--LPPCLVHCFTGSEEELAAYIEMG--FFVSVAGGICREKSGAALR 735
+ AAD + D D NL H DL ++ +Q AS+VGVK+ +VPG+T+++S+ ++EL RQ P +F TAGVHPY+ + S ++ + ++ L +E R VGECGLDYS FP E Q WF Q+ +AC+LKKPLFLHER A +DF +++ A G PP +VHCFTG+EEEL AY+ G +++ + G IC+ K GAAL+
Sbjct: 51 SQAADLELF--DFDCNLTHEDLRGNVATLMQQASTVGVKEMLVPGATIDESQRAIELCRQHPTKLFPTAGVHPYNARAIPSQQE-LTTLKGLMELQEVRAVGECGLDYSPSFPEPEFQKKWFAEQLSVACELKKPLFLHERLAHEDFIQLIDEATAKSGGYFPPAVVHCFTGTEEELKAYVARGDDWYIGITGFICK-KQGAALQ 251
BLAST of mRNA_Ecto-sp13_S_contig7446.18628.1 vs. uniprot
Match: A0A5D6YB90_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YB90_9STRA) HSP 1 Score: 181 bits (460), Expect = 4.400e-52 Identity = 91/194 (46.91%), Postives = 124/194 (63.92%), Query Frame = 1
Query: 160 IVDVDANLLHADLSDDIDHHIQVASSVGVKQFVVPGSTVEDSRGSLELARQKPNVVFSTAGVHPYHVQGCGSLEDAMASIATLAATKEARCVGECGLDYSEGFPAAELQLPWFERQVELACKLKKPLFLHERAAFDDFSEVLQRYDASHG--LPPCLVHCFTGSEEELAAYIEMGFFVSVAGGICREKSGAALR 735
+ D D NL H DL+ + A++ GV + +VPG+T+++SR +L L+R P+ +F+TAGVHPY+ + + + LA E R VGECGLDYS GFP AE Q WF Q+ELAC+L++PLFLHER A DDF + A G PP +VHCFTG+E EL AY+ GF++ V G +CR++ GA LR
Sbjct: 72 LFDFDCNLTHDDLTPLALDAMVRAAAAGVSEMLVPGATLDESRAALTLSRDHPHTLFATAGVHPYNAHAAPETHE-LEELEALAVLPECRAVGECGLDYSPGFPPAEPQREWFRAQLELACRLRQPLFLHERLAHDDFVATVASCQARFGDAFPPAVVHCFTGTERELRAYVARGFYIGVTGFVCRKELGAPLR 264
BLAST of mRNA_Ecto-sp13_S_contig7446.18628.1 vs. uniprot
Match: A0A024TGJ1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TGJ1_9STRA) HSP 1 Score: 179 bits (454), Expect = 1.570e-51 Identity = 102/242 (42.15%), Postives = 143/242 (59.09%), Query Frame = 1
Query: 31 LSLAVHLNRPSAALNTRFPIGRRVRALHTPTEA--AADAADTSSYIVDVDANLLHADLSDDIDHHIQVASSVGVKQFVVPGSTVEDSRGSLELARQKPNVVFSTAGVHPYHVQGCGSLEDAMASIATLAATKEARCVGECGLDYSEGFPAAELQLPWFERQVELACKLKKPLFLHERAAFDDFSEVLQRYDASHGLPPCLVHCFTGSEEELAAYIEMGFFVSVAGGICREKSGAALRAAVSA 750
+S A L + + N R P + +A ++A D + + D D N+ H + D +Q A V V Q +VPGST+E+S L LARQ P+ VF TAGVHPY+ E+ A+++ LAA E VGECGLDYS+GFP+ +LQL WF Q+ LA L+KPLFLHER A + F + L + LPP VHCFTG+ +E YI+MGF++ + G +C+E GAAL++ ++A
Sbjct: 1 MSSAGDLTAAAPSTNGRKPKSSKQQAAKASSKADELPRWLDDTVDLFDFDCNVTHPEFKGQEDALVQCARRVRVTQMLVPGSTIEESHECLALARQHPSTVFPTAGVHPYNATKPFDAEE-FATLSVLAANTEIVAVGECGLDYSDGFPSPDLQLSWFGPQLSLAVSLQKPLFLHERLAHEPFLDALTPH--LDNLPPACVHCFTGTTDEAQVYIKMGFYIGITGFVCKEPHGAALQSMLAA 239
BLAST of mRNA_Ecto-sp13_S_contig7446.18628.1 vs. uniprot
Match: A0A8K1FN21_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FN21_PYTOL) HSP 1 Score: 177 bits (449), Expect = 3.740e-51 Identity = 90/199 (45.23%), Postives = 127/199 (63.82%), Query Frame = 1
Query: 145 DTSSYIVDVDANLLHADLSDDIDHHIQVASSVGVKQFVVPGSTVEDSRGSLELARQKPNVVFSTAGVHPYHVQGCGSLEDAMASIATLAATKEARCVGECGLDYSEGFPAAELQLPWFERQVELACKLKKPLFLHERAAFDDFSEVLQRYDASHG--LPPCLVHCFTGSEEELAAYIEMGFFVSVAGGICREKSGAALR 735
D+ + + D DANL H DL D ++ A+SVGV + +VPG+T+++S ++ L RQ P +F TAGVHPYH + + + + + +AA ++ VGECGLDYS FP A+ Q WF Q+ELAC+L+KPLFLHER A DF ++ A PP +VHCFTG+E+EL Y+ F++ V G IC++ GAALR
Sbjct: 6 DSETVLFDFDANLTHDDLVQDAAAVMERAASVGVTEMLVPGATLDESEATIALCRQHPTNLFPTAGVHPYHAEALPT-DAELERLRGMAAQQDVLAVGECGLDYSPSFPDAKWQKAWFTVQLELACELQKPLFLHERLAHADFLALISECQAKFNGYFPPAVVHCFTGTEDELLEYVRRDFYIGVTGYICKKDRGAALR 203 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7446.18628.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7446.18628.1 >prot_Ecto-sp13_S_contig7446.18628.1 ID=prot_Ecto-sp13_S_contig7446.18628.1|Name=mRNA_Ecto-sp13_S_contig7446.18628.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=254bp MEHRSAVGLFLSLAVHLNRPSAALNTRFPIGRRVRALHTPTEAAADAADTback to top mRNA from alignment at Ecto-sp13_S_contig7446:93..2677- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7446.18628.1 ID=mRNA_Ecto-sp13_S_contig7446.18628.1|Name=mRNA_Ecto-sp13_S_contig7446.18628.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2585bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7446:93..2677- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7446:93..2677- >mRNA_Ecto-sp13_S_contig7446.18628.1 ID=mRNA_Ecto-sp13_S_contig7446.18628.1|Name=mRNA_Ecto-sp13_S_contig7446.18628.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=762bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7446:93..2677- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |