prot_Ecto-sp13_S_contig1221.1862.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1221.1862.1
Unique Nameprot_Ecto-sp13_S_contig1221.1862.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length398
Homology
BLAST of mRNA_Ecto-sp13_S_contig1221.1862.1 vs. uniprot
Match: D7G1G1_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1G1_ECTSI)

HSP 1 Score: 699 bits (1805), Expect = 3.080e-251
Identity = 382/397 (96.22%), Postives = 392/397 (98.74%), Query Frame = 0
Query:    1 MRPGTTLLLHDDLGCTELRIASSSTNALHLNTFGGYISILNTKVTSWSVSNKEPDAGAYDGSNPRSYMSAVSEMTHPSDTCDGAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYCEDESNPEVFDRVNVRGDIRFSDIHHNWFGQYSYGHQDGLWEYNTMRNSGYYGFDPHDDSDNLRIHNNIVYENGNHGIIASKRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSGSACIAIFESFGIEISDNVCTNSEEGIRLSMGSSYNKIFDNQVIDTAGRALWLYLGSDEIIASAATDGMCTGNLFQNNYLDGASIGVKFSETRDNMVIGNTMVGVGASMIDDSDGLVWSDNEVDDDFEIGIENTCVSSESDFDQISAGGANPSEC 397
            MRPGTTLLLHDDLGCTELRIASSSTNALHLNTFGGYISILNTKVTSWSVSNKEPDAGAYDGSNPRSYMSAVSEMTHPSDTCDGAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYC DESNPEVFDRVNVRGDIRFSDIHHNWFGQYSYGHQDGLWEYNTMRNSGYYGFDPHDDSDNLRIHNNIVYENGNHGIIASKRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +GSGSACIAIFESFGIEISDNVCT++EEGIRLSMGSSYNKIFDNQVIDTAGR+LWLYLGSDEIIASAATDGMCTGNLFQNNYLDGASIGVKFSETRDNM+IGNTMVGV  S+IDDSDGL+WSDNEV+DDFEIGIE TC+SSESDFDQISAGG+NPSEC
Sbjct:  105 MRPGTTLLLHDDLGCTELRIASSSTNALHLNTFGGYISILNTKVTSWSVSNKEPDAGAYDGSNPRSYMSAVSEMTHPSDTCDGAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYCTDESNPEVFDRVNVRGDIRFSDIHHNWFGQYSYGHQDGLWEYNTMRNSGYYGFDPHDDSDNLRIHNNIVYENGNHGIIASKRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTGSGSACIAIFESFGIEISDNVCTDNEEGIRLSMGSSYNKIFDNQVIDTAGRSLWLYLGSDEIIASAATDGMCTGNLFQNNYLDGASIGVKFSETRDNMLIGNTMVGVEESLIDDSDGLLWSDNEVEDDFEIGIETTCLSSESDFDQISAGGSNPSEC 501          
BLAST of mRNA_Ecto-sp13_S_contig1221.1862.1 vs. uniprot
Match: D7G1G2_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1G2_ECTSI)

HSP 1 Score: 491 bits (1264), Expect = 3.990e-171
Identity = 284/397 (71.54%), Postives = 312/397 (78.59%), Query Frame = 0
Query:    1 MRPGTTLLLHDDLGCTELRIASSSTNALHLNTFGGYISILNTKVTSWSVSNKEPDAGAYDGSNPRSYMSAVSEMTHPSDTCDGAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYCEDESNPEVFDRVNVRGDIRFSDIHHNWFGQYSYGHQDGLWEYNTMRNSGYYGFDPHDDSDNLRIHNNIVYENGNHGIIASKRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSGSACIAIFESFGIEISDNVCTNSEEGIRLSMGSSYNKIFDNQVIDTAGRALWLYLGSDEIIASAATDGMCTGNLFQNNYLDGASIGVKFSETRDNMVIGNTMVGVGASMIDDSDGLVWSDNEVDDDFEIGIENTCVSSESDFDQISAGGANPSEC 397
            M  GTTLLLHDDLGC                            +TSWSV N+ PD GAYDG N RS++SAVSEMTHPSDTCDGAADDDAGEAR+DIINS+V YLGYQA+ESYG++YKVRGYC DESNPEVFDRVNVRGDIRFSDIHHNWFGQ                    YGFDPHDDSDNLRIHNNIVYENGNHGIIASKRC    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSGSACIAIFESF IEISDN+CT +EEGIRLSMGSSYNKIFDNQVIDTAGR++W+YLGSDE+ ASAATDGMCTGNLFQNNYL+G+  GV  +ETRD M+IGNT +    +   DSDGLVW DN +D DF++   +TCV+SESDFDQI+  G+NPSEC
Sbjct:   12 MESGTTLLLHDDLGCD---------------------------LTSWSVGNRAPDNGAYDGLNARSFISAVSEMTHPSDTCDGAADDDAGEARMDIINSEVAYLGYQASESYGISYKVRGYCTDESNPEVFDRVNVRGDIRFSDIHHNWFGQQ-------------------YGFDPHDDSDNLRIHNNIVYENGNHGIIASKRCNDVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSGSACIAIFESFDIEISDNLCTQNEEGIRLSMGSSYNKIFDNQVIDTAGRSIWMYLGSDEVEASAATDGMCTGNLFQNNYLEGSETGVAMTETRDTMLIGNTFIDTDNNEWKDSDGLVWRDNNIDGDFDMRFSDTCVTSESDFDQINGVGSNPSEC 362          
BLAST of mRNA_Ecto-sp13_S_contig1221.1862.1 vs. uniprot
Match: A0A6H5K9I9_9PHAE (MEP6 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9I9_9PHAE)

HSP 1 Score: 285 bits (728), Expect = 3.290e-88
Identity = 197/385 (51.17%), Postives = 258/385 (67.01%), Query Frame = 0
Query:    4 GTTLLLHDDLGCTELRIASSSTNALHLNTFGGYISILNTKVTSWSVSNKEPDAGAYDGSNPRSYMSAVSE-MTHPSDTCDGAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYCEDESNPEVFDRVNVRGDIRFSDIHHNWFGQYSYGHQDGLWEYNTMRNSGYYGFDPHDDSDNLRIHNNIVYENGNHGIIASKRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSGSACIAIFESFGIEISDNVCTNSEEGIRLSMGSSYNKIFDNQVIDTAGRALWLYLGSDEIIASAATDGMCTGNLFQNNYLDGASIGVKFSETRDNMVIGNTMVGVGASMIDDSDGLVWSDNEVDDDFEIGIENTCVSSESDFDQI 387
            G  L LH + G T +R+ S S   + L   GG++S+LNT+++SW V   E D  A + S PRSY++A+SE +  P  TC G A +DAGEAR DIINS+V +LG+   E+YG+T+KVRG+C D SN ++FDRVNVRGDIRFSDIHHN+FG Y+YGHQDGLWEYN M  +  YGFDPHDDSDNLRIHNNIV+             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        AIFES   + S+N CT+++ G R S+G+S+NKI+DN+V D+    +++Y GSD    S   DG+ + N+  NN +D A+ G+K  +T  N   GN +         +S  ++W DN++    +I  E +C +S+SD  Q+
Sbjct:  115 GVKLELHAESGTTGMRLKSDS-KVIELRAHGGWLSLLNTELSSWDVD--EADY-ASNYSAPRSYVTAISEVLDSPPQTCVGHAKNDAGEARFDIINSEVHHLGHYGTEAYGITWKVRGFCVDLSNEDLFDRVNVRGDIRFSDIHHNYFGMYTYGHQDGLWEYNLMHENAKYGFDPHDDSDNLRIHNNIVWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIFESMEGDYSNNKCTDNKYGFRWSVGASHNKIYDNEVYDSQQYGIYMYEGSDLPYVS---DGLPSYNIIANNIIDTATEGIKMGDTVGNEFTGNVITNTADLRFRNSSEVIWKDNDIPAGVDIDSEGSCFTSDSDIVQL 492          
BLAST of mRNA_Ecto-sp13_S_contig1221.1862.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI)

HSP 1 Score: 248 bits (632), Expect = 8.950e-74
Identity = 154/377 (40.85%), Postives = 208/377 (55.17%), Query Frame = 0
Query:   17 ELRIASSSTNALHLNTFGGYISILNTKVTSWSVSNKEPDAGAYDGSNPRSYMSAVSEM-THPSDTCDGAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYCEDESNPEVFDRVNVRGDIRFSDIHHNWFGQYSYGHQDGLWEYNTMRNSGYYGFDPHDDSDNLRIHNNIVYENGNHGIIASKRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--SGSGSACIAIFESFGIEISDNVCTNSEEGIRLSMGSSYNKIFDNQVIDTAGRALWLYLGSDEIIASAATDGMCTGNLFQNNYLDGASIGVKFSETRDNMVIGNTM-VGVGASMI---DDSDGLVWSDNEVDD--DFEIGIEN-TCVSSESD 383
            ELR+ S+S   ++L   GG +  + TKV SW  S   PD    DG   RSY+SAVSE+ T   +TC+G A +  GEAR+DI NS++GYLG+Q +ESYGLT+KVRG+C+D+SNPE+FD VNV G++  SDIHH  FG Y+YGHQ G W  N M ++  YGFDPHDDSD L IH+N VY NG HGIIASKRC                                      +G A +A+ ESF  ++S+N   N++ G+R+S+G + N   +N + + +    + YLGSDE      + G    N+F  N   GA   +K  E      + N   VG    ++   DD+   V   N   D  DFE+ + N +C   ESD
Sbjct:  134 ELRLLSTSETYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDG---RSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDE--PDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNTGLDEGDFELKVTNDSCFDGESD 505          
BLAST of mRNA_Ecto-sp13_S_contig1221.1862.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI)

HSP 1 Score: 245 bits (625), Expect = 8.820e-73
Identity = 152/383 (39.69%), Postives = 207/383 (54.05%), Query Frame = 0
Query:   17 ELRIASSSTNALHLNTFGGYISILNTKVTSWSVSNKEPDAGAYDGSNPRSYMSAVSEM-THPSDTCDGAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYCEDESNPEVFDRVNVRGDIRFSDIHHNWFGQYSYGHQDGLWEYNTMRNSGYYGFDPHDDSDNLRIHNNIVYENGNHGIIASKRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--SGSGSACIAIFESFGIEISDNVCTNSEEGIRLSMGSSYNKIFDNQVIDTAGRALWLYLGSDEIIASAATDGMCTGNLFQNNYLDGASIGVKFSETRDNMVIGNTMVGVGASMIDDSDGLVWS-DNEV-----------DDDFEIGIEN-TCVSSESD 383
            ELR+ S++   ++L   GG +  ++TKV SW  S   PD    DG   RSY+SA+SE+ T   +TC+G A +  GEAR+DI +S++GYLGY  +ESYGLT+KVRG+CED+SNPEVFD VNV G++  SDIHH  FG Y+YGHQ G W  N M ++  YGFDPHDDSD L IH+N VY NG HGIIASKRC                                      +G A +A+ ESF  ++S+N   N++ G+R S+G + N   +N + + A    + YLG+DE      + G    N+F  N   GA   +K  E      + N         + D+DGLV   DN             D +FE+ ++N  C   E+D
Sbjct:  130 ELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDG---RSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDE--PDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFE------VGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACFDGEAD 501          
BLAST of mRNA_Ecto-sp13_S_contig1221.1862.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI)

HSP 1 Score: 253 bits (645), Expect = 1.360e-72
Identity = 153/383 (39.95%), Postives = 209/383 (54.57%), Query Frame = 0
Query:   15 CTELRIASSSTNALH-LNTFGGYISILNTKVTSWSVSNKEPDAGAYDGSNPRSYMSAVSEMTHPSDTCDGAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYCEDESNPEVFDRVNVRGDIRFSDIHHNWFGQYSYGHQDGLWEYNTMRNSGYYGFDPHDDSDNLRIHNNIVYENGNHGIIASKRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSG--SACIAIFESFGIEISDNVCTNSEEGIRLSMGSSYNKIFDNQVIDTAGRALWLYLGSDEIIASAATDGMCTGNLFQNNYLDGASIGVKFSETRDNMVIGNTMVGVGASMIDDSDGLVWSDNEVDDDFEIGIENTCVSSESDFDQISAGGANP 394
            C +LRI S+ ++  H +   GG +   +T VTSW   NKEP    Y+  N RS+++ VSE     D C+G A ++ GE R+DIINS++ YLGY  +ESYG+T+KVRG+C+D SNPEVF+  NV GD+  SDIHH ++G YSYGHQ G+W  N M ++  YGFDPHDDSD L I  N VY N NHGIIASKRC                                  + +    A IA+ ESF  +I  N+   ++ GIR+S+GS  N+++ N   D +   L+ Y GSDE   S   DG  +GN+   N ++   IGVK  E  DN    NT + V A    +S   +WS N++ D         C+  + +FD  S   + P
Sbjct:  516 CNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQE-TYE--NGRSFLNCVSEKL-TGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPDVS---DGRPSGNVLALNLVEDCPIGVKIKEGDDNEFYQNTFINVDAFEFPESTNTMWSGNDIGD--------GCIEEDDEFDAASGSDSIP 883          
BLAST of mRNA_Ecto-sp13_S_contig1221.1862.1 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE)

HSP 1 Score: 240 bits (613), Expect = 4.220e-71
Identity = 158/366 (43.17%), Postives = 208/366 (56.83%), Query Frame = 0
Query:    4 GTTLLLHDDLG---CTELRIASSSTNALHLNTFGGYISILNTKVTSWSVSNKEPDAGAYDGSNPRSYMSAVSEM-THPSDTCDGAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYCEDESNPEVFDRVNVRGDIRFSDIHHNWFGQYSYGHQDGLWEYNTMRNSGYYGFDPHDDSDNLRIHNNIVYENGNHGIIASKRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSG--SACIAIFESFGIEISDNVCTNSEEGIRLSMGSSYNKIFDNQVIDTAGRALWLYLGSDEIIASAATDGMCTGNLFQNNYLDGASIGVKFSETRDNMVIGNTMVGVGASMIDDSDGLVWSDN 363
            G TL +H         ELR+ S+S   ++L   GG +  L+TKV +W  S   PD    DG   RSY+SAVSE+ T  S TC+G A ++ GEAR+DI +S++GYLGY  +ESYGLT+KVRG+C D+SN ++F+ VNV G+I  SDIHHN FG Y+YGHQ G W  N M ++  YGFDPHDDSD L IH+N VY+NG HGIIASKRC                        XXXXXXXXXX       A +A+ ESF  ++SDN+  N++ GIR S+GS  N  F+N +  +   + + YLGSD         G    N+FQ N + G    +K  +      I NT         +D+   + S N
Sbjct:  111 GITLKVHGTSAGGDADELRLLSTSDTFINLRAHGGSLDFLSTKVFAWDTSINGPDRDEEDG---RSYVSAVSEVITDDSQTCNGRAKNNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHDLFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYDNGYHGIIASKRCNGVSIQGNEVYGGATSSAGIFLHRXXXXXXXXXXXXXXXXDAGLAMMESFNADVSDNIFENNKYGIRFSVGSGRNVFFNNVISGSTRYSTYSYLGSDA--PDVVDSGRSQDNVFQENNIIGGVESIKLLDADGTQFIDNTFEDATTIRFNDAKKTLMSGN 471          
BLAST of mRNA_Ecto-sp13_S_contig1221.1862.1 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE)

HSP 1 Score: 239 bits (609), Expect = 8.580e-71
Identity = 143/350 (40.86%), Postives = 188/350 (53.71%), Query Frame = 0
Query:   17 ELRIASSSTNALHLNTFGGYISILNTKVTSWSVSNKEPDAGAYDGSNPRSYMSAVSEM-THPSDTCDGAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYCEDESNPEVFDRVNVRGDIRFSDIHHNWFGQYSYGHQDGLWEYNTMRNSGYYGFDPHDDSDNLRIHNNIVYENGNHGIIASKRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--SGSGSACIAIFESFGIEISDNVCTNSEEGIRLSMGSSYNKIFDNQVIDTAGRALWLYLGSDEIIASAATDGMCTGNLFQNNYLDGASIGVKFSETRDNMVIGNTMVGVGASMIDDSDGLVWSDN 363
            ELR+ S+S   +HL  +GG +  L+TKV +W  S   PD    DG   RSY+SAVSE+ T    TC+G A ++ GEAR+DI NS++ YLGY   E+YGLT+KVRG+C D+ NPE+FD VNV G+I  SDIHHN FG Y+YGHQ G W  N M ++  YGFDPHDDSD L IH+N V+ NG HGIIASKRC                                      +G A +A+ ESF  ++SDN   N++ G+RLS+G   N    N +  +A    + YLG+D+        G    N+F  N + G    +   E      I NT     A    D+   + S N
Sbjct:  101 ELRLLSTSDTFIHLRAYGGSLDFLSTKVFAWDTSKNAPDQDESDG---RSYISAVSEVITDDRQTCNGRAKNNMGEARMDIENSEMAYLGYHGTETYGLTWKVRGFCVDKGNPELFDDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVWNNGYHGIIASKRCNGVSIQGNEVYGGSSGSAGIFLHRSSDNGIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVRLSVGCGRNIFSKNVITGSAEFNTFSYLGADK--PEVVDSGRSQDNVFMENNIIGGVESILLKEADGTQFIDNTFKDAAAIRFVDATKTLMSGN 445          
BLAST of mRNA_Ecto-sp13_S_contig1221.1862.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI)

HSP 1 Score: 236 bits (603), Expect = 3.400e-70
Identity = 148/386 (38.34%), Postives = 202/386 (52.33%), Query Frame = 0
Query:   15 CTELRIASSS-TNALHLNTFGGYISILNTKVTSWSVSNKEPDAGAYDGSNPRSYMSAVSEMTHPSDTCDGAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYCEDESNPEVFDRVNVRGDIRFSDIHHNWFGQYSYGHQDGLWEYNTMRNSGYYGFDPHDDSDNLRIHNNIVYENGNHGIIASKRCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS--GSGSACIAIFESFGIEISDNVCTNSEEGIRLSMGSSYNKIFDNQVIDTAGRALWLYLGSDEIIASAATDGMCTGNLFQNNYLDGASIGVKFSETRDNMVIGNTMVGVGASMIDDSDGLVWSDNEVDDDFEIGIENTCVSSESDFDQISAGGANPSEC 397
            C ELRI S+S ++   +   GG +   +T VTSW V  ++P     DG   RS++  VSE+    DTC   A ++ GE R+DII+S++GYLGY A+E+YG+T+KVRG+C D SNP+VFD VNV GD++ SDIHH ++G YS+GHQ G+W  N M ++  YGFDPHDDSD L I  N VY N NHGIIASKRC                                  +    G A IA+ E+ G +I DN     E GIR+ +GSS NK+ DN   +     ++ Y+GSDE        G    N F NN +     GVK  E+ +  +  N   G      +++  +VWS N +         NTC+    +    +     P EC
Sbjct:   78 CAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDG---RSFIRCVSEVLTGEDTC---AINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEPWVGG---GRPCDNEFYNNTIQATETGVKIKESDNISITNNAFSGTTEIEFNNAIDIVWSGNSI-------PTNTCLEDIDNNSTFTGSSGLPLEC 447          
BLAST of mRNA_Ecto-sp13_S_contig1221.1862.1 vs. uniprot
Match: A0A6H5L834_9PHAE (MEP8 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L834_9PHAE)

HSP 1 Score: 225 bits (573), Expect = 4.230e-70
Identity = 106/110 (96.36%), Postives = 109/110 (99.09%), Query Frame = 0
Query:   43 KVTSWSVSNKEPDAGAYDGSNPRSYMSAVSEMTHPSDTCDGAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYCEDESNPEVFDRVNVRGDIRFSDIHHNWFGQ 152
            +VTSWSVS+KEPDAGAYDGSNPRSY+SAVSEMTHPSDTCDGAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYC DESNPEVFDRVNVRGDIRFSDIHHNWFGQ
Sbjct:    8 QVTSWSVSDKEPDAGAYDGSNPRSYISAVSEMTHPSDTCDGAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYCADESNPEVFDRVNVRGDIRFSDIHHNWFGQ 117          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1221.1862.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1G1_ECTSI3.080e-25196.22Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7G1G2_ECTSI3.990e-17171.54Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5K9I9_9PHAE3.290e-8851.17MEP6 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7FXE4_ECTSI8.950e-7440.85Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7G339_ECTSI8.820e-7339.69Mannuronan C-5-epimerase n=2 Tax=Ectocarpus silicu... [more]
D8LC73_ECTSI1.360e-7239.95Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus sili... [more]
Q7XAJ7_9PHAE4.220e-7143.17Mannuronan C-5-epimerase n=1 Tax=Laminaria digitat... [more]
Q7XAJ8_9PHAE8.580e-7140.86Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina... [more]
D7FRR8_ECTSI3.400e-7038.34Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5L834_9PHAE4.230e-7096.36MEP8 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 205..227
e-value: 1.4
score: 17.9
coord: 275..297
e-value: 3600.0
score: 3.3
coord: 157..179
e-value: 8200.0
score: 0.7
coord: 181..203
e-value: 13.0
score: 14.7
coord: 252..273
e-value: 1300.0
score: 6.5
coord: 229..251
e-value: 1.9
score: 17.5
coord: 334..362
e-value: 4200.0
score: 2.8
coord: 312..333
e-value: 1600.0
score: 5.7
IPR022441Parallel beta-helix repeat-2TIGRFAMTIGR03804TIGR03804coord: 204..243
e-value: 1.0E-7
score: 29.5
coord: 247..287
e-value: 5.3E-5
score: 20.8
IPR007742Periplasmic copper-binding protein NosD, beta helix domainPFAMPF05048NosDcoord: 159..286
e-value: 1.4E-13
score: 50.7
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 1..308
e-value: 2.7E-82
score: 278.7
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 133..352

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1221contigEcto-sp13_S_contig1221:8594..16847 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1221.1862.1mRNA_Ecto-sp13_S_contig1221.1862.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1221 6338..16876 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1221.1862.1 ID=prot_Ecto-sp13_S_contig1221.1862.1|Name=mRNA_Ecto-sp13_S_contig1221.1862.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=398bp
MRPGTTLLLHDDLGCTELRIASSSTNALHLNTFGGYISILNTKVTSWSVS
NKEPDAGAYDGSNPRSYMSAVSEMTHPSDTCDGAADDDAGEARLDIINSD
VGYLGYQAAESYGLTYKVRGYCEDESNPEVFDRVNVRGDIRFSDIHHNWF
GQYSYGHQDGLWEYNTMRNSGYYGFDPHDDSDNLRIHNNIVYENGNHGII
ASKRCNDVSIQNNVVYDNALHGIMLHRSSDDGIIRNNTVSGSGSACIAIF
ESFGIEISDNVCTNSEEGIRLSMGSSYNKIFDNQVIDTAGRALWLYLGSD
EIIASAATDGMCTGNLFQNNYLDGASIGVKFSETRDNMVIGNTMVGVGAS
MIDDSDGLVWSDNEVDDDFEIGIENTCVSSESDFDQISAGGANPSEC*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006626PbH1
IPR022441Para_beta_helix_rpt-2
IPR007742NosD_dom
IPR012334Pectin_lyas_fold
IPR011050Pectin_lyase_fold/virulence