prot_Ecto-sp13_S_contig743.18611.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig743.18611.1
Unique Nameprot_Ecto-sp13_S_contig743.18611.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length257
Homology
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BLAST of mRNA_Ecto-sp13_S_contig743.18611.1 vs. uniprot
Match: A0A6H5KP08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP08_9PHAE)

HSP 1 Score: 256 bits (654), Expect = 1.000e-81
Identity = 211/256 (82.42%), Postives = 212/256 (82.81%), Query Frame = 0 
Query:    1 MAEAQDGFTPLHFCSQAGCAEGCRLLLGAGAKVDAKLRKTKKTXXXXXXXXXXXXXXXXXXXXXXXXXXETSKGQTPLLLANKAEVKAALAGDPPPAGDSPAAAAGSHGDGEGSKGXXXXXXXXXXXXXXXXXXXXXHLNQDHGGAGALATGGSAREGKSGKEQGGENDGADGTATPPPAATEVSSLGGSQKAEGPSGERGGSVAEAGGVGVGGRVGSLAERRXXXXXXXXXXXXXXXXNGAVNLSHLGVDGDDAV 256
            MAEAQDGFTPLHFCSQAGCAEGCRLLLGAGAKVDAKLRKTKKTXXXXXXXXXXXXXXXXXXXXXXXXXXETSKGQTPLLLANKAEVKAALAGDPPPAGD  AA     G G G+K                       LNQD   AGALATGGSAREGKSGKE GGENDGADGT TP  AA EVSS GGSQKAEGPSG RGGSVAEAGGVG G RVGSLAERRXXXXXXXXXXXXXXXXNGAVNLSHLGVDGDDAV
Sbjct:   67 MAEAQDGFTPLHFCSQAGCAEGCRLLLGAGAKVDAKLRKTKKTXXXXXXXXXXXXXXXXXXXXXXXXXXETSKGQTPLLLANKAEVKAALAGDPPPAGD--AAXXXXXGYGPGTK-------------TVAEAAAAGGLNQDQ--AGALATGGSAREGKSGKEHGGENDGADGTTTPT-AAAEVSSFGGSQKAEGPSGGRGGSVAEAGGVG-GDRVGSLAERRXXXXXXXXXXXXXXXXNGAVNLSHLGVDGDDAV 303
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BLAST of mRNA_Ecto-sp13_S_contig743.18611.1 vs. uniprot
Match: D8LFR3_ECTSI (Ion channel nompc, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFR3_ECTSI)

HSP 1 Score: 239 bits (610), Expect = 1.320e-75
Identity = 220/261 (84.29%), Postives = 221/261 (84.67%), Query Frame = 0 
Query:    1 MAEAQDGFTPLHFCSQAGCAEGCRLLLGAGAKVDAKLRKTKKTXXXXXXXXXXXXXXXXXXXXXXXXXXETSKGQTPLLLANKAEVKAALAGDPPPAGDSPAAAAGSHGDGEGSKGXXXXXXXXXXXXXXXXXXXXXH-----LNQDHGGAGALATGGSAREGKSGKEQGGENDGADGTATPPPAATEVSSLGGSQKAEGPSGERGGSVAEAGGVGVGGRVGSLAERRXXXXXXXXXXXXXXXXNGAVNLSHLGVDGDDAV 256
            MAEAQDGFTPLHFCSQAGCA GCRLLLGAGAKVDAKLRKTKKTXXXXXXXXXXXXXXXXXXXXXXXXXXETSKGQTPLLLANKAEVKAAL GDPP                     XXXXXXXXXXXXXXXXXXXXX      LNQD GGAGAL TGGSAREGKSGKEQGGE+DGADGTATP  AA EVSSLGGSQKAEG SGER GSVAEAGGVG GGRVGSLA   XXXXXXXXXXXXXXXXNGAVNLSHLGVDGDDAV
Sbjct:    1 MAEAQDGFTPLHFCSQAGCAAGCRLLLGAGAKVDAKLRKTKKTXXXXXXXXXXXXXXXXXXXXXXXXXXETSKGQTPLLLANKAEVKAALVGDPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLNQDQGGAGALVTGGSAREGKSGKEQGGESDGADGTATPTAAAAEVSSLGGSQKAEGSSGEREGSVAEAGGVGGGGRVGSLAXXXXXXXXXXXXXXXXXXXNGAVNLSHLGVDGDDAV 261
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig743.18611.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KP08_9PHAE1.000e-8182.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFR3_ECTSI1.320e-7584.29Ion channel nompc, putative n=1 Tax=Ectocarpus sil... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 6..35
e-value: 0.015
score: 24.5
coord: 40..69
e-value: 3.0E-4
score: 30.1
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 40..72
score: 13.571
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 6..38
score: 10.366
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 11..81
e-value: 2.6E-10
score: 40.7
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 6..81
score: 25.196
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..91
e-value: 1.9E-24
score: 87.7
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 5..84
NoneNo IPR availablePANTHERPTHR24134:SF3ANKYRIN REPEAT FAMILY PROTEINcoord: 4..95
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 4..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig743contigEcto-sp13_S_contig743:17719..21483 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig743.18611.1mRNA_Ecto-sp13_S_contig743.18611.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig743 17719..21510 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig743.18611.1 ID=prot_Ecto-sp13_S_contig743.18611.1|Name=mRNA_Ecto-sp13_S_contig743.18611.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=257bp
MAEAQDGFTPLHFCSQAGCAEGCRLLLGAGAKVDAKLRKTKKTPLHFAAG
KGHVEAVRVLMQAGADVAAETSKGQTPLLLANKAEVKAALAGDPPPAGDS
PAAAAGSHGDGEGSKGAGAAGDGPGTKTVAAGGGGGGHLNQDHGGAGALA
TGGSAREGKSGKEQGGENDGADGTATPPPAATEVSSLGGSQKAEGPSGER
GGSVAEAGGVGVGGRVGSLAERRRKKRKLAKAAAAAAGGNGAVNLSHLGV
DGDDAV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf