mRNA_Ecto-sp13_S_contig741.18594.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig741.18594.1 vs. uniprot
Match: D7FRT5_ECTSI (TNase-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT5_ECTSI) HSP 1 Score: 428 bits (1101), Expect = 7.050e-143 Identity = 213/218 (97.71%), Postives = 216/218 (99.08%), Query Frame = 1
Query: 421 RRASIAIFTAGMLFGCCISSPVSANIRLYRTVPDIPKSMFKNHATLNGNVVTVSDGDSIRVRHKPNIPLPLPNRDMTGKKNSEQTLQIRLYAVDCPEVAHFGNPAQPFSAEAKAFTKEALQGKPVKIKLLSMDQYNRAVCRVQYGKWPFRKDISAELLKNGLGVVYRQGGAEYDGREESLTEYENSAKSRKEGVWSRSNGETPAQYKARIKQQQPAAS 1074
RRASIAIFTAGMLFGCCISSPVSANIRLYRTVPDIPKSMFKNHA+LNGNVVTVSDGDSIRVRHKPNIPLPLPNRDMTGKKNSEQTLQIRLYAVDCPEVAHFGNPAQPFSAEAKAFTKEALQGKPVKIKLLSMDQYNRAVCRVQYGKWPFRKDISAELLKNGLGVVYRQGGAEYD REESLTEYE SAKSRKEGVWSRSNGETPAQYKARIKQQ+PAA+
Sbjct: 59 RRASIAIFTAGMLFGCCISSPVSANIRLYRTVPDIPKSMFKNHASLNGNVVTVSDGDSIRVRHKPNIPLPLPNRDMTGKKNSEQTLQIRLYAVDCPEVAHFGNPAQPFSAEAKAFTKEALQGKPVKIKLLSMDQYNRAVCRVQYGKWPFRKDISAELLKNGLGVVYRQGGAEYDSREESLTEYEKSAKSRKEGVWSRSNGETPAQYKARIKQQRPAAA 276
BLAST of mRNA_Ecto-sp13_S_contig741.18594.1 vs. uniprot
Match: A0A6H5JVK5_9PHAE (TNase-like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVK5_9PHAE) HSP 1 Score: 411 bits (1057), Expect = 2.740e-137 Identity = 202/207 (97.58%), Postives = 206/207 (99.52%), Query Frame = 1
Query: 454 MLFGCCISSPVSANIRLYRTVPDIPKSMFKNHATLNGNVVTVSDGDSIRVRHKPNIPLPLPNRDMTGKKNSEQTLQIRLYAVDCPEVAHFGNPAQPFSAEAKAFTKEALQGKPVKIKLLSMDQYNRAVCRVQYGKWPFRKDISAELLKNGLGVVYRQGGAEYDGREESLTEYENSAKSRKEGVWSRSNGETPAQYKARIKQQQPAAS 1074
MLFGCCISSPVSANIRLYRTVPDIPKSMFKNHATLNGNVVTVSDGDSIRVRHKPNIPLPLPNRDMTGKKNSEQTLQ+RLYAVDCPEVAHFGNPAQPFSAEAKAFTKEALQGKPVKIKLLSMDQYNRAVCRV+YGKWPFRKDISAELLKNGLGVVYRQGGAEYDGREESLTEYENSAK RKEGVWSRSNGETPAQYKARIKQQ+PAA+
Sbjct: 1 MLFGCCISSPVSANIRLYRTVPDIPKSMFKNHATLNGNVVTVSDGDSIRVRHKPNIPLPLPNRDMTGKKNSEQTLQVRLYAVDCPEVAHFGNPAQPFSAEAKAFTKEALQGKPVKIKLLSMDQYNRAVCRVRYGKWPFRKDISAELLKNGLGVVYRQGGAEYDGREESLTEYENSAKRRKEGVWSRSNGETPAQYKARIKQQRPAAA 207
BLAST of mRNA_Ecto-sp13_S_contig741.18594.1 vs. uniprot
Match: D0N995_PHYIT (TNase-like domain-containing protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0N995_PHYIT) HSP 1 Score: 164 bits (415), Expect = 5.000e-43 Identity = 90/195 (46.15%), Postives = 118/195 (60.51%), Query Frame = 1
Query: 472 ISSPVSANIRLYRTVPDIPKSMFKNHATLNGNVVTVSDGDSIRVRHKPNIPLPLPNRDMTGKKNSEQTLQIRLYAVDCPEVAHFGNPAQPFSAEAKAFTKEALQGKPVKIKLLSMDQYNRAVCRVQYGKWPFRKDISAELLKNGLGVVYRQGGAEYDGREESLTEYENSAKSRKEGVWSRSNG-ETPAQYKARIK 1053
+S+ S R + TV D+P +F + V SDGD++RVRH +PL GK S+ TLQIRL +D PE A FGNP QPF EAK + L+G+ + + LL DQY RAVC VQYG WPFR+D SAE+LK GLG VYRQ GA Y G++E E +K +K G+WS+ E+ + YKAR++
Sbjct: 11 LSAGPSQPFRRFSTVEDLPNRLFHQEGKIKAAAVNFSDGDTLRVRH---LPLFRGAGSYDGKL-SDHTLQIRLAGIDTPETAKFGNPGQPFGDEAKKWLSSTLEGRKLTLTLLHKDQYARAVCLVQYGWWPFRRDASAEILKVGLGQVYRQAGAVYGGKQEIYEMLEEKSKKKKRGIWSQGKKMESSSDYKARMR 201
BLAST of mRNA_Ecto-sp13_S_contig741.18594.1 vs. uniprot
Match: K3X2T6_GLOUD (TNase-like domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X2T6_GLOUD) HSP 1 Score: 165 bits (418), Expect = 7.200e-43 Identity = 94/208 (45.19%), Postives = 123/208 (59.13%), Query Frame = 1
Query: 433 IAIFTAGMLFGCCISSPVSANIRLYRTVPDIPKSMFKNHATLNGNVVTVSDGDSIRVRHKPNIPLPLPNRDMTGKKNSEQTLQIRLYAVDCPEVAHFGNPAQPFSAEAKAFTKEALQGKPVKIKLLSMDQYNRAVCRVQYGKWPFRKDISAELLKNGLGVVYRQGGAEYDGREESLTEYENSAKSRKEGVWSRSNG-ETPAQYKARIK 1053
+ F AG+ G + + R + TV DIP +F ++ V+ SDGD+ R RH +P TGK SE TLQIRL A+D PE A FGNP QPF EAK + + L GK + + LL DQY+RAVC V+YG WPFR++ S E+LK GL VYRQ GA Y G++E + E A+ RK G+WS+ ET + YKAR+K
Sbjct: 43 VGAFVAGICVGLLLPK-LRQPFRRFSTVDDIPMKLFYQERQIHAKAVSFSDGDTFRARH---LPFWRGAGAYTGKM-SEHTLQIRLAAIDTPETAKFGNPGQPFGDEAKKWLSDNLDGKKLTLTLLHKDQYSRAVCMVEYGHWPFRRNASEEILKVGLANVYRQAGAVYGGKQERFEKLEAQAQKRKIGIWSQGKKLETSSAYKARMK 245
BLAST of mRNA_Ecto-sp13_S_contig741.18594.1 vs. uniprot
Match: HTP3_SAPPC (Endonuclease Htp3 n=2 Tax=Saprolegnia TaxID=4769 RepID=HTP3_SAPPC) HSP 1 Score: 164 bits (414), Expect = 8.760e-43 Identity = 96/206 (46.60%), Postives = 121/206 (58.74%), Query Frame = 1
Query: 433 IAIFTAGMLFGCCISSPVSANIRLYRTVPDIPKSMFKNHATLNGNVVTVSDGDSIRVRHKPNIPLPLPNRDMTGK-KNSEQTLQIRLYAVDCPEVAHFGNPAQPFSAEAKAFTKEALQGKPVKIKLLSMDQYNRAVCRVQYGKWPFRKDISAELLKNGLGVVYRQGGAEYDGREESLTEYENSAKSRKEGVWSRSNGETPAQYKAR 1047
I F G+ G I + + + TV DIPK F++ TL G VV+V+DGD+IRVRH P L N D K K +E TLQ+R+ VDCPE A FG QPF EAKA+ K LQ + V KLL DQY+RAVC V YG W ++S ELL++G +YRQ GA Y G E+ E A+ ++ +WS ETPAQYKAR
Sbjct: 10 ILAFAVGLGLGLLIPH-LQKPFQRFSTVNDIPKEFFEHERTLRGKVVSVTDGDTIRVRHVP----WLANGDGDFKGKLTETTLQLRVAGVDCPETAKFGRTGQPFGEEAKAWLKGELQDQVVSFKLLMKDQYSRAVCLVYYGSWAAPMNVSEELLRHGYANIYRQSGAVYGGLLETFEALEAEAREKRVNIWSLDKRETPAQYKAR 210
BLAST of mRNA_Ecto-sp13_S_contig741.18594.1 vs. uniprot
Match: A0A662YBN6_9STRA (TNase-like domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YBN6_9STRA) HSP 1 Score: 165 bits (418), Expect = 9.040e-43 Identity = 94/211 (44.55%), Postives = 122/211 (57.82%), Query Frame = 1
Query: 442 FTAGMLFGCCISSPVSANIRLYRTVPDIPKSMFKNHATLNGNVVTVSDGDSIRVRHKPNIPLPLPNRDMTGKKNSEQTLQIRL------YAVDCPEVAHFGNPAQPFSAEAKAFTKEALQGKPVKIKLLSMDQYNRAVCRVQYGKWPFRKDISAELLKNGLGVVYRQGGAEYDGREESLTEYENSAKSRKEGVWSR-SNGETPAQYKARIK 1053
F G+ FG + + R Y TV D+P +F +N VV SDGD+ R RH P L K SE TLQIRL Y D PE FGNP QPF +AK + AL+G+ + + LL DQY RAVC VQYG+WPFR+D S E+LK GLG VYRQ GA Y G++E+ + E A+ +K G+WS+ S E+ + YKAR++
Sbjct: 49 FAVGVCFGLLLPR-LRQPFRRYATVEDLPMKLFHEERKINAVVVNFSDGDTFRARHVPF----LRGAGSYDGKLSEHTLQIRLAGIGVAYGKDTPETPKFGNPGQPFGDDAKKWLASALEGRKLTLTLLHKDQYARAVCMVQYGRWPFRRDASEEILKVGLGQVYRQAGAVYGGKQETYEKLEEKARKKKRGIWSQGSKMESSSDYKARMR 254
BLAST of mRNA_Ecto-sp13_S_contig741.18594.1 vs. uniprot
Match: A0A2D4CEP5_PYTIN (TNase-like domain-containing protein (Fragment) n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CEP5_PYTIN) HSP 1 Score: 165 bits (417), Expect = 9.630e-43 Identity = 93/203 (45.81%), Postives = 119/203 (58.62%), Query Frame = 1
Query: 442 FTAGMLFGCCISSPVSANIRLYRTVPDIPKSMFKNHATLNGNVVTVSDGDSIRVRHKPNIPLPLPNRDMTGKKNSEQTLQIRLYAVDCPEVAHFGNPAQPFSAEAKAFTKEALQGKPVKIKLLSMDQYNRAVCRVQYGKWPFRKDISAELLKNGLGVVYRQGGAEYDGREESLTEYENSAKSRKEGVWSRSNG-ETPAQYKAR 1047
F AG+ G + + R + TV DIP S F + V+VSDGD+ R RH +PL GK SE TLQIRL +D PE A FG+P QPF EAKA+ + L+G+ + + LL DQY RAVC V YG+WPFR++ S E+LK GL VYRQ GA Y GR E E A+ +K G+WS+ ET ++YKAR
Sbjct: 43 FVAGLCLGLVLPK-LRQPFRRFTTVDDIPMSFFHQERQITARSVSVSDGDTFRARH---VPLWRSTGGFKGKM-SENTLQIRLAGIDTPETAKFGSPGQPFGDEAKAWLSQTLEGRKLTLTLLHKDQYARAVCMVHYGRWPFRRNASEEILKAGLANVYRQAGAVYGGRLEVFERLEAEAQQKKRGIWSQGKKLETASEYKAR 240
BLAST of mRNA_Ecto-sp13_S_contig741.18594.1 vs. uniprot
Match: A0A225WZK0_9STRA (TNase-like domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WZK0_9STRA) HSP 1 Score: 164 bits (416), Expect = 1.400e-42 Identity = 87/186 (46.77%), Postives = 116/186 (62.37%), Query Frame = 1
Query: 499 RLYRTVPDIPKSMFKNHATLNGNVVTVSDGDSIRVRHKPNIPLPLPNRDMTGKKNSEQTLQIRLYAVDCPEVAHFGNPAQPFSAEAKAFTKEALQGKPVKIKLLSMDQYNRAVCRVQYGKWPFRKDISAELLKNGLGVVYRQGGAEYDGREESLTEYENSAKSRKEGVWSRSNG-ETPAQYKARIK 1053
R + TV D+P +F + V SDGD+ R RH +PL GK S+ TLQIRL +D PE A FG+P QPF EAK + LQG+ + + LL DQY RAVC VQYG+WPFR+D S E+LK GLG VYRQ GA Y G++E+ + E +AK +K+G+WS+ E+ + YKAR++
Sbjct: 66 RRFATVEDLPNKLFHEEGKIKAVAVNFSDGDTFRARH---LPLFRGGGSFEGKL-SDHTLQIRLAGIDTPETAKFGHPGQPFGDEAKKWLTSTLQGRKLTLTLLHKDQYARAVCLVQYGRWPFRRDTSEEILKVGLGQVYRQAGAVYGGKQENYEKLEETAKKKKKGIWSQGKKMESSSDYKARMR 247
BLAST of mRNA_Ecto-sp13_S_contig741.18594.1 vs. uniprot
Match: A0A0G4FWH3_VITBC (TNase-like domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FWH3_VITBC) HSP 1 Score: 162 bits (410), Expect = 6.580e-42 Identity = 98/225 (43.56%), Postives = 131/225 (58.22%), Query Frame = 1
Query: 463 GCCISSP----VSANIRLYRTVPDIPKSMFKNHATLNGNVVTVSDGDSIRVRHKPNIPLPLPNRDMTGKKNSEQTLQIRLYAVDCPEVAHFGNPAQPFSAEAKAFTKEALQGKPVKIKLLSMDQYNRAVCRVQYGKWPF-------RKDISAELLKNGLGVVYRQGGAEYDGREESLTEYENSAKSRKEGVWSRSNGE--TPAQYKARIKQQQPAAS*RRRKMSS 1098
G CISS A+ LY+TV DIP F A L VV V+DGD+IR RH ++ +D G+ + TL IRLY VD PE A FGN QP+ EAKAF KE LQ + V++KLL DQY RA+ V Y K P D+S EL+ NGL V+YR GGAEY+G +++L E AK R+ +WS + E +P QYK +++ Q+ A ++R +S+
Sbjct: 2 GSCISSAPTGDADASTTLYKTVDDIPAEQFNKKAKLACRVVNVADGDTIRCRHVVDVGRGGGAQDEKGRLR-DTTLSIRLYGVDTPETAKFGNAGQPYGEEAKAFVKERLQDQLVEVKLLRRDQYGRAIAAVTYQKPPAFLFFGGGAVDVSQELVDNGLAVIYRGGGAEYNGNKDTLESLEQRAKQRRVNIWSVPDDERVSPGQYKQQLRAQERAMEEQQRGLSA 225
BLAST of mRNA_Ecto-sp13_S_contig741.18594.1 vs. uniprot
Match: A0A8J6CG03_DIALT (TNase-like domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CG03_DIALT) HSP 1 Score: 165 bits (418), Expect = 7.060e-42 Identity = 99/249 (39.76%), Postives = 143/249 (57.43%), Query Frame = 1
Query: 388 VRPISMALPTS------RRASIAIFTAGMLFGCCISSPVSANIRLYRTVPDIPKSMFKNHATLNGNVVTVSDGDSIRVRHKPNIPLPL--------PNRDMTGKKNSEQTLQIRLYAVDCPEVAHFGNPAQPFSAEAKAFTKEALQGKPVKIKLLSMDQYNRAVCRVQY--GKWPFRKDISAELLKNGLGVVYRQGGAEYDGRE--ESLTEYENSAKSRKEGVWSRSNG----ETPAQYKARIKQQQPA 1068
+RP+++ + ++ R I IF G+ G +SS + ++ TV D+P F+ + VVTV+DGD++RV H P + P P G K SE T+Q+RL A+D PEVA FG PAQPF EAKA+ ++ L G+ +++KLLS DQY RAV V+Y G P R D+ +LL +GL VVYRQGGA+YD + + E AK++ GVW+ G E P++YKAR++ + A
Sbjct: 81 LRPLALKMSSTFKRLDPRARVIVIFVLGLTAGALVSSSAES-FEIFNTVDDVPGKYFRQQREIPCVVVTVTDGDTMRVMHTPLLSGPRRAIAERVRPRAGKHGPKLSESTMQVRLAAIDTPEVAKFGKPAQPFGNEAKAYVQKRLLGRRIRVKLLSRDQYGRAVASVKYQRGLAPLRSDLGEDLLSDGLAVVYRQGGAQYDSADGVQKWNRIEARAKAQGRGVWAGGKGGGALELPSEYKARMRARATA 328 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig741.18594.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig741.18594.1 >prot_Ecto-sp13_S_contig741.18594.1 ID=prot_Ecto-sp13_S_contig741.18594.1|Name=mRNA_Ecto-sp13_S_contig741.18594.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=315bp MFFQKQSLTVAVAAWWCLLSSPSLAFPPGAALSAASASGTTFPFSGMMTRback to top mRNA from alignment at Ecto-sp13_S_contig741:4038..13753+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig741.18594.1 ID=mRNA_Ecto-sp13_S_contig741.18594.1|Name=mRNA_Ecto-sp13_S_contig741.18594.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=9716bp|location=Sequence derived from alignment at Ecto-sp13_S_contig741:4038..13753+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig741:4038..13753+ >mRNA_Ecto-sp13_S_contig741.18594.1 ID=mRNA_Ecto-sp13_S_contig741.18594.1|Name=mRNA_Ecto-sp13_S_contig741.18594.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=945bp|location=Sequence derived from alignment at Ecto-sp13_S_contig741:4038..13753+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |