prot_Ecto-sp13_S_contig7373.18545.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7373.18545.1
Unique Nameprot_Ecto-sp13_S_contig7373.18545.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length584
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7373.18545.1 vs. uniprot
Match: A0A6H5KU01_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU01_9PHAE)

HSP 1 Score: 749 bits (1934), Expect = 1.360e-265
Identity = 400/453 (88.30%), Postives = 406/453 (89.62%), Query Frame = 0 
Query:  157 MFEEAEDMVDYASLVAFAKEQPAARRAASVVSRLRSHLLAVRNGKGLDLRATLEAFAVDDGGGGSRRVLRQPQLEDALRELGFKCTDDEKSALYSRLDLSGGNAGIVCTDLVAFVEGSADYDDGVVDAAIGAVTIASGDEERGVGKLLRRAQATIVEAAQRMDSDFEAFDRPYLCYDWRRTGRVGTAEFVRATIRCGFPFTRAQAAFLAGVFGDGSDVSYPTFLSWATPGPDGLAASGVRGDRRGTGESASRLQRHPGAAALFALEGGRSESRRGRVRDEEEEAELKVRTALQRMGEDGVARAWEEFERVDPGGRRGGVQEEELVEV-------------------------LAILDLPVTATDVAGLMRRFTTGTDPQSKSFFLYPRLLQNIATGEQGANMGSGRPGDILRSIRAELRRLVRRTTTASAAADRGRGGGEGKPATLRAFESFD 584
            MFEEAEDMVDYASLVAFAKEQPAARRAASVVSRLRSHLLAVRNG+GLDLRATLEAFAVDDGGGG RRVLRQPQLE ALRELGFKCTDDEKSALY+RLDLSGGNAGIVCTDLV FVEG ADYD GVVD AIGAVT+AS DEERGVGKLLRRAQATIVEAAQRMDSDFEAFDRPYL YDWRRTGRVGTA FVR+T RCGFPFTRAQAAFLAGVFGDGSDVSYPTFLSWATPGPDGLAASGV GDRRGTGESASRLQRHPG AAL ALEGGRS SRRG V DEEEEAELKVRTALQRMGEDGVARAWEEFER+DPGGRRGGVQE+ELVEV                         LA L LPVTATDVAGLMRRFTTGTDPQSKSFFLYPRLLQNIA GE G NMGSGRPGDILRSIRAELRRLVRRTTTASAA DRGRGGGEGKPATLRAFESFD
Sbjct:    1 MFEEAEDMVDYASLVAFAKEQPAARRAASVVSRLRSHLLAVRNGEGLDLRATLEAFAVDDGGGGGRRVLRQPQLESALRELGFKCTDDEKSALYNRLDLSGGNAGIVCTDLVGFVEGPADYDYGVVDTAIGAVTVASRDEERGVGKLLRRAQATIVEAAQRMDSDFEAFDRPYLRYDWRRTGRVGTAAFVRSTARCGFPFTRAQAAFLAGVFGDGSDVSYPTFLSWATPGPDGLAASGVGGDRRGTGESASRLQRHPGEAALSALEGGRSASRRGGVSDEEEEAELKVRTALQRMGEDGVARAWEEFERMDPGGRRGGVQEQELVEVGVKDERDREKRTRPFCMQGEIKGQVLASLGLPVTATDVAGLMRRFTTGTDPQSKSFFLYPRLLQNIAAGEHGGNMGSGRPGDILRSIRAELRRLVRRTTTASAAGDRGRGGGEGKPATLRAFESFD 453
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BLAST of mRNA_Ecto-sp13_S_contig7373.18545.1 vs. uniprot
Match: D8LSF6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSF6_ECTSI)

HSP 1 Score: 754 bits (1947), Expect = 3.630e-262
Identity = 393/421 (93.35%), Postives = 404/421 (95.96%), Query Frame = 0 
Query:  164 MVDYASLVAFAKEQPAARRAASVVSRLRSHLLAVRNGKGLDLRATLEAFAVDDGGGGSRRVLRQPQLEDALRELGFKCTDDEKSALYSRLDLSGGNAGIVCTDLVAFVEGSADYDDGVVDAAIGAVTIASGDEERGVGKLLRRAQATIVEAAQRMDSDFEAFDRPYLCYDWRRTGRVGTAEFVRATIRCGFPFTRAQAAFLAGVFGDGSDVSYPTFLSWATPGPDGLAASGVRGDRRGTGESASRLQRHPGAAALFALEGGRSESRRGRVRDEEEEAELKVRTALQRMGEDGVARAWEEFERVDPGGRRGGVQEEELVEVLAILDLPVTATDVAGLMRRFTTGTDPQSKSFFLYPRLLQNIATGEQGANMGSGRPGDILRSIRAELRRLVRRTTTASAAADRGRGGGEGKPATLRAFESFD 584
            MVDYASLVAFAKEQPAARRAA+VVSRLRSHLLAVRNGKGLDLRATLEAFAVDDGGGG RRVLRQPQLEDALRELGFKCT+DEKSALY+RLDLSGGNAGIVCTDLVAFVEG ADYD+GVVD AIGAVT+AS DEERGVGKLLRRAQATIVEAAQRMDSDFEAFDRPYLCYDWRRTGRVGTAEFVR+T+RCGFPFTRAQAAFLAGVFGDGSDVSYPTFLSWATPGPDGLAASGV GD RGTGESASRLQRHPGAAAL ALEGGRS SRRG V+DEEEEAELKVRTALQRMGEDGVARAWEEFER+DPG RRGGVQEEELVEVLA L LPVTATDVAGLMRRFTTGTDPQSKSFFLYPRLLQNIATGE G NMGSGRPGDILRSIRAELRRLVRRT+TASAAADRGR G EG+P TLRAFESFD
Sbjct:    1 MVDYASLVAFAKEQPAARRAAAVVSRLRSHLLAVRNGKGLDLRATLEAFAVDDGGGGGRRVLRQPQLEDALRELGFKCTEDEKSALYNRLDLSGGNAGIVCTDLVAFVEGPADYDNGVVDTAIGAVTVASRDEERGVGKLLRRAQATIVEAAQRMDSDFEAFDRPYLCYDWRRTGRVGTAEFVRSTVRCGFPFTRAQAAFLAGVFGDGSDVSYPTFLSWATPGPDGLAASGVGGDLRGTGESASRLQRHPGAAALSALEGGRSASRRGGVKDEEEEAELKVRTALQRMGEDGVARAWEEFERMDPGRRRGGVQEEELVEVLATLGLPVTATDVAGLMRRFTTGTDPQSKSFFLYPRLLQNIATGEHGGNMGSGRPGDILRSIRAELRRLVRRTSTASAAADRGRDGDEGQPGTLRAFESFD 421
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BLAST of mRNA_Ecto-sp13_S_contig7373.18545.1 vs. uniprot
Match: D8LSF7_ECTSI (C2-C2_1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSF7_ECTSI)

HSP 1 Score: 164 bits (414), Expect = 7.470e-39
Identity = 77/84 (91.67%), Postives = 83/84 (98.81%), Query Frame = 0 
Query:    1 VESVFGRLEGTCPPPDLRASFAKFDKESTGLLDRPRFALALRNLRPSLELSPELLRAAMEYFEDSTAVRGGRIGGGETNKIDHR 84
            VES+FGRLEGTCPPPDLRASFAK DKESTGLLDRPRFALALRNLRPSLELSPELLRAAMEYFEDSTAVRGGR+GGG+T++ID+R
Sbjct: 1456 VESIFGRLEGTCPPPDLRASFAKLDKESTGLLDRPRFALALRNLRPSLELSPELLRAAMEYFEDSTAVRGGRVGGGQTSRIDYR 1539
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7373.18545.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KU01_9PHAE1.360e-26588.30EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
D8LSF6_ECTSI3.630e-26293.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LSF7_ECTSI7.470e-3991.67C2-C2_1 domain-containing protein n=1 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 15..199
e-value: 6.5E-8
score: 34.3
NoneNo IPR availablePANTHERPTHR20875FAMILY NOT NAMEDcoord: 180..386
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 15..187

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7373contigEcto-sp13_S_contig7373:2..4960 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7373.18545.1mRNA_Ecto-sp13_S_contig7373.18545.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7373 2..4960 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7373.18545.1 ID=prot_Ecto-sp13_S_contig7373.18545.1|Name=mRNA_Ecto-sp13_S_contig7373.18545.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=584bp
VESVFGRLEGTCPPPDLRASFAKFDKESTGLLDRPRFALALRNLRPSLEL
SPELLRAAMEYFEDSTAVRGGRIGGGETNKIDHRAFTIFCEERRHPDVSP
AVALLGRRPLHPGALDVFARRDPVGTGFVCRVDLFDGLRELGIAGTPPKQ
LRQLATMFEEAEDMVDYASLVAFAKEQPAARRAASVVSRLRSHLLAVRNG
KGLDLRATLEAFAVDDGGGGSRRVLRQPQLEDALRELGFKCTDDEKSALY
SRLDLSGGNAGIVCTDLVAFVEGSADYDDGVVDAAIGAVTIASGDEERGV
GKLLRRAQATIVEAAQRMDSDFEAFDRPYLCYDWRRTGRVGTAEFVRATI
RCGFPFTRAQAAFLAGVFGDGSDVSYPTFLSWATPGPDGLAASGVRGDRR
GTGESASRLQRHPGAAALFALEGGRSESRRGRVRDEEEEAELKVRTALQR
MGEDGVARAWEEFERVDPGGRRGGVQEEELVEVLAILDLPVTATDVAGLM
RRFTTGTDPQSKSFFLYPRLLQNIATGEQGANMGSGRPGDILRSIRAELR
RLVRRTTTASAAADRGRGGGEGKPATLRAFESFD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011992EF-hand-dom_pair