prot_Ecto-sp13_S_contig10156.185.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10156.185.1
Unique Nameprot_Ecto-sp13_S_contig10156.185.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length113
Homology
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BLAST of mRNA_Ecto-sp13_S_contig10156.185.1 vs. uniprot
Match: A0A6H5LDU4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDU4_9PHAE)

HSP 1 Score: 204 bits (520), Expect = 1.110e-60
Identity = 109/113 (96.46%), Postives = 111/113 (98.23%), Query Frame = 0 
Query:    1 LGSPSGAGFAAPSPTGAPRTLPPAALAAAAVVREGSGSGARSPTWPLPRVIPEGSEISDQDAGGLLIDFFKSVHDKVKTASDELGEQQQXXXQPASPDETGKGAMHPLMASKR 113
            LGSPSGAGFAAPSPTGAPRTLPPAALAAAAV+REGSGSGARSPTWPLPRVIPEGSEISDQDAGGLLIDFFKSVHDKVKTASDELGEQQ XXX PASP+ETGKGAMHPLMASKR
Sbjct:  470 LGSPSGAGFAAPSPTGAPRTLPPAALAAAAVIREGSGSGARSPTWPLPRVIPEGSEISDQDAGGLLIDFFKSVHDKVKTASDELGEQQXXXXXPASPEETGKGAMHPLMASKR 582
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BLAST of mRNA_Ecto-sp13_S_contig10156.185.1 vs. uniprot
Match: D8LR84_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR84_ECTSI)

HSP 1 Score: 151 bits (381), Expect = 1.900e-41
Identity = 78/80 (97.50%), Postives = 78/80 (97.50%), Query Frame = 0 
Query:   34 EGSGSGARSPTWPLPRVIPEGSEISDQDAGGLLIDFFKSVHDKVKTASDELGEQQQXXXQPASPDETGKGAMHPLMASKR 113
            EGSGSGARSPTWPLPRVIPEGSEISDQDAGGLLIDFFKSVHDKVKTASDELGEQQQXXXQPASPD TGKG MHPLMASKR
Sbjct:  351 EGSGSGARSPTWPLPRVIPEGSEISDQDAGGLLIDFFKSVHDKVKTASDELGEQQQXXXQPASPDATGKGGMHPLMASKR 430
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10156.185.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LDU4_9PHAE1.110e-6096.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LR84_ECTSI1.900e-4197.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10156contigEcto-sp13_S_contig10156:4472..5838 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10156.185.1mRNA_Ecto-sp13_S_contig10156.185.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10156 4472..5838 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10156.185.1 ID=prot_Ecto-sp13_S_contig10156.185.1|Name=mRNA_Ecto-sp13_S_contig10156.185.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=113bp
LGSPSGAGFAAPSPTGAPRTLPPAALAAAAVVREGSGSGARSPTWPLPRV
IPEGSEISDQDAGGLLIDFFKSVHDKVKTASDELGEQQQQQQQPASPDET
GKGAMHPLMASKR
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