prot_Ecto-sp13_S_contig122.1849.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig122.1849.1
Unique Nameprot_Ecto-sp13_S_contig122.1849.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length1106
Homology
BLAST of mRNA_Ecto-sp13_S_contig122.1849.1 vs. uniprot
Match: D8LL17_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL17_ECTSI)

HSP 1 Score: 1848 bits (4787), Expect = 0.000e+0
Identity = 1010/1106 (91.32%), Postives = 1027/1106 (92.86%), Query Frame = 0
Query:    1 MTAAATELFPHDVPVLRTSLVRHGLVDLSTSPRARKTPAGPASSEDLVAGDRGEEQWTKAAAAGGNSGFQALIGVNSVVVGHVRAAEELRASLLSPPSPRDLQKIRAPGTPTRRGEQPKSEEERLRKRSVSLRTGSPSAQAAASSRPQRVGSAASIAATLAMAAVRRGDRPYYVGAASGASRGSPEQTPQPTEGVSMANLLDIAVSLFGSGLGAGGRGGRHSIDGDGSSKSSGVVKSKKKEEKLVTFTVDVHTGGSMTLGVTVKELGGGAVFVEDVRKLPGGSSGPAELAGILVGDVILGINYEPLEKGLVHTSTRLAEAIALAGFVKLQISRCVRSKSWRQSPPRKDCALVSELMWRTAQLRKAGLVSSAERHSIAGLVLQRMAWEEGTSRAPAPLLATTPPVDSSVESAASALLDSLVLEAKGLRKAIDVRCLHARTTLDTVEVPSVWGPTSSEVASSDAKAASPEAATPASTRATVRFVVRVEDVGTGRQWLVFPHYGELSALRQELLAIWPPIADLPFPAKRSSASRAXXXXXXXXXX-VVEDRVVRLEAFLDGALALLGMYVSIDPRCSGALRIVQDFLGRPEDLFSADLALSPALRDQKRAELLLYRLLNQADSPASRMKHLLMRDFESDTSLAPDVDSLMKCASSRLRRLQDFVLDHHEEQLSSCAYTTSETREAIVRKAVRRQVELSLYLPLRRCLWKELTWRIRDPARKLERAIQALRRSPPAVFGLETLGVLESEEWGPVKEVMGQATRSVLPTDQIDGLHRAAEHLTVLHASLQLNVCCDNGDASTDAADSSCNGRSGSSAALSVDSRRTSLKPYSREDRKGEAGEEDREEGSVRVESATAPTHGTLCPEEGEFGIRERDSNGLRLGGRPHRQMPAVSDSFTGDDGSVTNDVASDSDGPSSAPALSLVDEEQRLNVVQELVEDELSWQAHCVQDGDITTEEVGGEALRPKFNSSRSWSALSTSHDISPTPAKSSTSSWESIGSLDEGAAPGESDGGGXXXXXXVQDHPEVAPPATRPSDQAMGADDFLPLFALVLVHSAPLDLLLPQTILTHLMDLDGSLSEAGYLVATLEAAVSFITQVHASSLGADGNQDSSP 1105
            MTAAATELFPHDVPVLRTSLVRHGLVDLSTSPRARK PAGPASS+DL AGDRGEEQWTKAAAAGGNSGFQAL+GVNSVVVGHVRAAEELRASL SPPSPRDLQKIRAPGTPTRRGEQPKS EERLRKRSVSLRT SPSAQAAASSR QR GSAASIAATLAMAAVRRGDRPYYVGAA GASRGSPEQTPQPTEGVSMANLLDIAVSLFGSG GAGGRGGRHSIDGDGSSKSSGVVKSKKKEEKLVTFTVDVHTGGSMTLGVTVKELGGGAVFVEDVRKLPGGSSGPAELAGILVGDVILGINYEPLEKGLVHTSTRLAEAIALAGFVKLQISRCVRSKSWRQS PRKDCALVSELMWRTAQLRKAG   SAERHSIAGLVLQRMAWEEGTSRA APLLATTPPVDSS+ESAASALLDSLVLEAKGLRKAIDVRCLH RT ++TVEVPSVWGPTSSEVASSDAKAA PEAATPASTRATVRFVVRVEDVGTGRQWLVFPHYG+LSALRQELLA+WPPIADLPFPAKRSS SRA           VVE+RVVRLEAFLDGAL+LLGMYVSIDPRCSGAL IVQDFLGRPEDLF+ADLALSPALRDQKRAELLLYRLLNQADSPA+RMKHLLMRDFESDTSLAPDVDSLMKCASSRLRRLQDFVLDHHEEQLSSCAYTTSETREAIVRKAVRRQVELSLYLPLRRCLWKELTWRIRDPARKLERAIQALRRSPPAVFGLETLGVL S+EWGPVKEVMGQATR+VLPTDQIDGL RAAEHLT LHASLQLN CCDNGDASTDA DSSCNGRSGSS ALSVDSRR SLK YSRED KGEAGEED EEGSVR E ATAPTHGTLCPEEGEFGIRERDSNGLRLGGRP RQ  AVSDSFTGD G  TNDVASDSDGPSSAPALSL DEEQRLNVVQELVED+L WQA CVQD DI TEEV  EALRP FNSSRSWSALSTSHDISPT AKSSTSSW+SIG L+EGAAPG      XXXXXX              SDQAMGADDFLPLFALVLVHSAPLDLLLPQT+LTHLMDLDGSLSEAGYLVATLEAAVSFITQVHASSL ADGNQDSSP
Sbjct:    1 MTAAATELFPHDVPVLRTSLVRHGLVDLSTSPRARKAPAGPASSQDLAAGDRGEEQWTKAAAAGGNSGFQALVGVNSVVVGHVRAAEELRASLRSPPSPRDLQKIRAPGTPTRRGEQPKSAEERLRKRSVSLRTDSPSAQAAASSRRQRAGSAASIAATLAMAAVRRGDRPYYVGAAGGASRGSPEQTPQPTEGVSMANLLDIAVSLFGSGDGAGGRGGRHSIDGDGSSKSSGVVKSKKKEEKLVTFTVDVHTGGSMTLGVTVKELGGGAVFVEDVRKLPGGSSGPAELAGILVGDVILGINYEPLEKGLVHTSTRLAEAIALAGFVKLQISRCVRSKSWRQSLPRKDCALVSELMWRTAQLRKAG---SAERHSIAGLVLQRMAWEEGTSRALAPLLATTPPVDSSLESAASALLDSLVLEAKGLRKAIDVRCLHTRTIVETVEVPSVWGPTSSEVASSDAKAAPPEAATPASTRATVRFVVRVEDVGTGRQWLVFPHYGDLSALRQELLAMWPPIADLPFPAKRSSVSRAAAAETAETEETVVEERVVRLEAFLDGALSLLGMYVSIDPRCSGALHIVQDFLGRPEDLFNADLALSPALRDQKRAELLLYRLLNQADSPAARMKHLLMRDFESDTSLAPDVDSLMKCASSRLRRLQDFVLDHHEEQLSSCAYTTSETREAIVRKAVRRQVELSLYLPLRRCLWKELTWRIRDPARKLERAIQALRRSPPAVFGLETLGVLASKEWGPVKEVMGQATRNVLPTDQIDGLRRAAEHLTALHASLQLNACCDNGDASTDATDSSCNGRSGSSGALSVDSRRASLKLYSREDGKGEAGEEDGEEGSVRAEGATAPTHGTLCPEEGEFGIRERDSNGLRLGGRPDRQTRAVSDSFTGDGGRATNDVASDSDGPSSAPALSLADEEQRLNVVQELVEDDLCWQAQCVQDEDIATEEVDREALRPNFNSSRSWSALSTSHDISPTAAKSSTSSWDSIGGLNEGAAPGXXXXXXXXXXXXXXXXXXXXXXXXXXSDQAMGADDFLPLFALVLVHSAPLDLLLPQTMLTHLMDLDGSLSEAGYLVATLEAAVSFITQVHASSLSADGNQDSSP 1103          
BLAST of mRNA_Ecto-sp13_S_contig122.1849.1 vs. uniprot
Match: A0A7S3H9E4_9STRA (Hypothetical protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H9E4_9STRA)

HSP 1 Score: 148 bits (374), Expect = 9.400e-33
Identity = 156/576 (27.08%), Postives = 257/576 (44.62%), Query Frame = 0
Query:  232 SGVVKSKKKEEKLVTFTVDVHTGGSMTLGVTVKELGGGAVFVEDVRKLPGGSSGPAELAGILVGDVILGINYEPLEKGLVHTSTRLAEAIALAGFVKLQISRC---VRSKSWR------QSPPRKDCALVSELMWRTAQLRKAGLVSSAERHSIAGLVLQRMAWEEGTSRAPAPLLATTPPVDSSVESAASALLDSL-----VLEAKGLRKAIDVRCLHARTTLDTVEVPSVWGPTSSEVASSDAKAASPEAATPASTRATVRFVVRVEDVGTGRQWLVFPHYGELSALRQELLAIWPPIADLPFPAKRSSASRAXXXXXXXXXXVVEDRVVRLEAFLDGALALLGMYVSIDPRCSGALRIVQDFLGRPEDLFSADLALSPALRDQKRAELLLYRLLNQADSPASR--MKHLLMRDFES--DTSLAPDVDSLMKCASSRLRRLQDFVLDHHEEQLSSCAYTTSETRE-----AIVRKAVRRQVELSLYLPLRRCLWKELTWRIRDPARKLERAIQALRRSPPAVFGLETLGVLESEEWGPVKEVMGQATRSVLPTDQIDGLHRAAEHLTVLHASLQ 784
            +G+  + KK+     ++V V  G + TLG+ VK+L    + V  +++      G  E AGI +GDVI G+N+ P  +G          +  L   +K +  R    +  + WR       + P        E++ +   L ++ + S  ER +   ++L  M  ++   RA      T+  ++ S  +A +  +  L     +++AKGLR A+ VR +H ++  DTV                                    +V+RVEDV +G QW+V   Y +  AL +ELL +     ++ FP KR S              +VE+R+V LE ++   L +L +Y ++D   S ALR +Q FLG    L   D    PAL DQ+  EL+ Y+ LN   S A +  ++ +   D +   +   A     ++  A   L  ++ FV   H  Q+     T  E        + VRK +RRQVE +LYLPLRR +++ +   + + ++ L+RAI  L+ +PP  F LE   V  +       +   +  ++ LP DQ   L +AA  +  LH   Q
Sbjct:  113 AGLHNAAKKQATGSIYSVVVDLGKTGTLGIGVKDLADNVLAVSMLKR-ENCCPGAGEDAGIRLGDVIYGVNFIPTREG----------SKTLISIIKKETGRGKTHIHIQGWRCHQLCSDAIPGYHFPRADEILVQAYSLVQSKVFSDWERWNFIEILLGHM-LDDLKLRASGDDGDTSGLLEPSQGAARAKQMQVLDLERNIMQAKGLRTALCVRIVHTKSHGDTVV-----------------------------------YVLRVEDVQSGLQWVVQRRYSDFFALNEELLDMTHFTKEVEFPRKRLSIRNTAK--------LVENRIVALEQYMRRMLHILTLYATMDSSASRALRHLQTFLGVDNYL---DCVHPPALDDQRFIELMAYQFLNDFGSEACQQCVRFITSVDLDGMVEIGTADGYVPVLNHARDALAEVEQFVQQLHMAQMIQTLQTRREDLNEDQLRSFVRKCIRRQVEAALYLPLRRTVFRIVFTFLAEKSKLLQRAITMLQGAPPKFFMLEPF-VTRATSLPRTVKAFRRVIQAYLPADQGQLLIQAATAVMELHKECQ 629          
BLAST of mRNA_Ecto-sp13_S_contig122.1849.1 vs. uniprot
Match: A0A7S1U3A3_9STRA (Hypothetical protein (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U3A3_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 4.820e-6
Identity = 35/70 (50.00%), Postives = 45/70 (64.29%), Query Frame = 0
Query: 1024 ATRPSDQ---AMGADDFLPLFALVLVHSAPLDLLLPQTILTHLMDLDGSLSEAGYLVATLEAAVSFITQV 1090
            AT P D    AM AD+FLPLFA VLVH+ P  LLL Q ++  L+D D ++ E GY  ATL+A V  + Q+
Sbjct:  148 ATSPGDGGLGAMSADEFLPLFAYVLVHARPRRLLLAQLLVPALLDPDDAVGERGYHCATLQAGVQLVLQL 217          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig122.1849.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LL17_ECTSI0.000e+091.32Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3H9E4_9STRA9.400e-3327.08Hypothetical protein (Fragment) n=2 Tax=Spumella e... [more]
A0A7S1U3A3_9STRA4.820e-650.00Hypothetical protein (Fragment) n=2 Tax=Phaeomonas... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001478PDZ domainSMARTSM00228pdz_newcoord: 257..335
e-value: 6.5E-4
score: 29.0
IPR001478PDZ domainPROSITEPS50106PDZcoord: 248..307
score: 8.707
IPR037191VPS9 domain superfamilyGENE3D1.20.1050.80coord: 1020..1104
e-value: 9.4E-11
score: 43.5
IPR037191VPS9 domain superfamilySUPERFAMILY109993VPS9 domaincoord: 624..1099
IPR036871PX domain superfamilyGENE3D3.30.1520.10coord: 467..567
e-value: 2.2E-6
score: 29.1
IPR036871PX domain superfamilySUPERFAMILY64268PX domaincoord: 476..560
IPR003123VPS9 domainPFAMPF02204VPS9coord: 1026..1090
e-value: 3.8E-9
score: 36.7
IPR003123VPS9 domainPROSITEPS51205VPS9coord: 929..1096
score: 11.953
NoneNo IPR availableGENE3D2.30.42.10coord: 228..335
e-value: 8.0E-7
score: 31.1
IPR036034PDZ superfamilySUPERFAMILY50156PDZ domain-likecoord: 242..336

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig122contigEcto-sp13_S_contig122:7372..17098 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig122.1849.1mRNA_Ecto-sp13_S_contig122.1849.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig122 6949..17494 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig122.1849.1 ID=prot_Ecto-sp13_S_contig122.1849.1|Name=mRNA_Ecto-sp13_S_contig122.1849.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1106bp
MTAAATELFPHDVPVLRTSLVRHGLVDLSTSPRARKTPAGPASSEDLVAG
DRGEEQWTKAAAAGGNSGFQALIGVNSVVVGHVRAAEELRASLLSPPSPR
DLQKIRAPGTPTRRGEQPKSEEERLRKRSVSLRTGSPSAQAAASSRPQRV
GSAASIAATLAMAAVRRGDRPYYVGAASGASRGSPEQTPQPTEGVSMANL
LDIAVSLFGSGLGAGGRGGRHSIDGDGSSKSSGVVKSKKKEEKLVTFTVD
VHTGGSMTLGVTVKELGGGAVFVEDVRKLPGGSSGPAELAGILVGDVILG
INYEPLEKGLVHTSTRLAEAIALAGFVKLQISRCVRSKSWRQSPPRKDCA
LVSELMWRTAQLRKAGLVSSAERHSIAGLVLQRMAWEEGTSRAPAPLLAT
TPPVDSSVESAASALLDSLVLEAKGLRKAIDVRCLHARTTLDTVEVPSVW
GPTSSEVASSDAKAASPEAATPASTRATVRFVVRVEDVGTGRQWLVFPHY
GELSALRQELLAIWPPIADLPFPAKRSSASRAAAETAEAEETVVEDRVVR
LEAFLDGALALLGMYVSIDPRCSGALRIVQDFLGRPEDLFSADLALSPAL
RDQKRAELLLYRLLNQADSPASRMKHLLMRDFESDTSLAPDVDSLMKCAS
SRLRRLQDFVLDHHEEQLSSCAYTTSETREAIVRKAVRRQVELSLYLPLR
RCLWKELTWRIRDPARKLERAIQALRRSPPAVFGLETLGVLESEEWGPVK
EVMGQATRSVLPTDQIDGLHRAAEHLTVLHASLQLNVCCDNGDASTDAAD
SSCNGRSGSSAALSVDSRRTSLKPYSREDRKGEAGEEDREEGSVRVESAT
APTHGTLCPEEGEFGIRERDSNGLRLGGRPHRQMPAVSDSFTGDDGSVTN
DVASDSDGPSSAPALSLVDEEQRLNVVQELVEDELSWQAHCVQDGDITTE
EVGGEALRPKFNSSRSWSALSTSHDISPTPAKSSTSSWESIGSLDEGAAP
GESDGGGEGAEEGVQDHPEVAPPATRPSDQAMGADDFLPLFALVLVHSAP
LDLLLPQTILTHLMDLDGSLSEAGYLVATLEAAVSFITQVHASSLGADGN
QDSSP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001478PDZ
IPR037191VPS9_dom_sf
IPR036871PX_dom_sf
IPR003123VPS9
IPR036034PDZ_sf