prot_Ecto-sp13_S_contig73147.18478.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig73147.18478.1
Unique Nameprot_Ecto-sp13_S_contig73147.18478.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length66
Homology
BLAST of mRNA_Ecto-sp13_S_contig73147.18478.1 vs. uniprot
Match: A0A6H5KBC6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBC6_9PHAE)

HSP 1 Score: 114 bits (284), Expect = 4.340e-29
Identity = 56/58 (96.55%), Postives = 56/58 (96.55%), Query Frame = 0
Query:    1 PEREADTQTDDFHERPPTPDFVPKKTGVDAWTQIEVSDKLFDFEAEVQPMLAVLVGKV 58
            PEREADTQTDDF ERP TPDFVPKKTGVDAWTQIEVSDKLFDFEAEVQPMLAVLVGKV
Sbjct:   31 PEREADTQTDDFQERPQTPDFVPKKTGVDAWTQIEVSDKLFDFEAEVQPMLAVLVGKV 88          
BLAST of mRNA_Ecto-sp13_S_contig73147.18478.1 vs. uniprot
Match: D7FP98_ECTSI (Flagellar radial spoke protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP98_ECTSI)

HSP 1 Score: 112 bits (280), Expect = 9.770e-28
Identity = 55/57 (96.49%), Postives = 55/57 (96.49%), Query Frame = 0
Query:    1 PEREADTQTDDFHERPPTPDFVPKKTGVDAWTQIEVSDKLFDFEAEVQPMLAVLVGK 57
            PEREADTQTDDF ERP TPDFVPKKTGVDAWTQIEVSDKLFDFEAEVQPMLAVLVGK
Sbjct:  133 PEREADTQTDDFQERPQTPDFVPKKTGVDAWTQIEVSDKLFDFEAEVQPMLAVLVGK 189          
BLAST of mRNA_Ecto-sp13_S_contig73147.18478.1 vs. uniprot
Match: A0A7J7Q4Y5_9CHLO (Radial spoke protein 3-domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7Q4Y5_9CHLO)

HSP 1 Score: 73.9 bits (180), Expect = 7.620e-14
Identity = 38/58 (65.52%), Postives = 46/58 (79.31%), Query Frame = 0
Query:    1 PEREADTQTDDFHERPPTPDFVPKKTGVDAWTQIEVSDKLFDFEAEVQPMLAVLVGKV 58
            PE +  TQTD F +RPPTP FVP K+G+DA TQIE  + LFDF+AEV+P+L VLVGKV
Sbjct:  116 PEADTTTQTDAFLDRPPTPQFVPTKSGLDAATQIEQGE-LFDFDAEVEPLLEVLVGKV 172          
BLAST of mRNA_Ecto-sp13_S_contig73147.18478.1 vs. uniprot
Match: A0A2R5GH80_9STRA (Radial spoke head protein 3-like n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GH80_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 9.130e-14
Identity = 38/57 (66.67%), Postives = 46/57 (80.70%), Query Frame = 0
Query:    1 PEREADTQTDDFHERPPTPDFVPKKTGVDAWTQIEVSDKLFDFEAEVQPMLAVLVGK 57
            PE E +TQTD F +RP  P FVP KTG+DA TQ+EV D+LFDF+AEV+P+L VLVGK
Sbjct:  121 PETETETQTDPFMDRPSLPLFVPFKTGIDAETQVEV-DELFDFDAEVEPILEVLVGK 176          
BLAST of mRNA_Ecto-sp13_S_contig73147.18478.1 vs. uniprot
Match: A0A383WN54_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WN54_TETOB)

HSP 1 Score: 73.6 bits (179), Expect = 1.060e-13
Identity = 38/58 (65.52%), Postives = 45/58 (77.59%), Query Frame = 0
Query:    1 PEREADTQTDDFHERPPTPDFVPKKTGVDAWTQIEVSDKLFDFEAEVQPMLAVLVGKV 58
            PE +  TQTD F +RPPTP FVP K+G DA TQIE  + LFDF+AEV+P+L VLVGKV
Sbjct:  115 PEADTTTQTDAFLDRPPTPQFVPTKSGTDAATQIEQGE-LFDFDAEVEPLLEVLVGKV 171          
BLAST of mRNA_Ecto-sp13_S_contig73147.18478.1 vs. uniprot
Match: A0A836BU12_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BU12_9CHLO)

HSP 1 Score: 73.2 bits (178), Expect = 1.410e-13
Identity = 39/58 (67.24%), Postives = 45/58 (77.59%), Query Frame = 0
Query:    1 PEREADTQTDDFHERPPTPDFVPKKTGVDAWTQIEVSDKLFDFEAEVQPMLAVLVGKV 58
            PE +  TQTD F +RPPTP FVP+KTG DA TQIE  D LFDF+ EV+P+L VLVGKV
Sbjct:   68 PEADTSTQTDAFLDRPPTPLFVPQKTGTDAVTQIENGD-LFDFDFEVEPILEVLVGKV 124          
BLAST of mRNA_Ecto-sp13_S_contig73147.18478.1 vs. uniprot
Match: A0A2V0PE13_9CHLO (Radial spoke n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PE13_9CHLO)

HSP 1 Score: 73.2 bits (178), Expect = 1.420e-13
Identity = 38/58 (65.52%), Postives = 45/58 (77.59%), Query Frame = 0
Query:    1 PEREADTQTDDFHERPPTPDFVPKKTGVDAWTQIEVSDKLFDFEAEVQPMLAVLVGKV 58
            PE +   QTD+F ERPPTP FVP K+G+DA TQIE  D LFDF+ EV+P+L VLVGKV
Sbjct:  101 PEADVAAQTDEFLERPPTPAFVPAKSGLDAATQIEQGD-LFDFDLEVEPLLEVLVGKV 157          
BLAST of mRNA_Ecto-sp13_S_contig73147.18478.1 vs. uniprot
Match: D8U522_VOLCA (Uncharacterized protein n=5 Tax=Volvox TaxID=3066 RepID=D8U522_VOLCA)

HSP 1 Score: 73.2 bits (178), Expect = 1.430e-13
Identity = 39/58 (67.24%), Postives = 45/58 (77.59%), Query Frame = 0
Query:    1 PEREADTQTDDFHERPPTPDFVPKKTGVDAWTQIEVSDKLFDFEAEVQPMLAVLVGKV 58
            PE +  TQTD F +RPPTP FVP+KTG DA TQIE  D LFDF+ EV+P+L VLVGKV
Sbjct:  111 PEADTSTQTDAFLDRPPTPLFVPQKTGTDAVTQIENGD-LFDFDFEVEPILEVLVGKV 167          
BLAST of mRNA_Ecto-sp13_S_contig73147.18478.1 vs. uniprot
Match: A0A150GHZ9_GONPE (RSP3 protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GHZ9_GONPE)

HSP 1 Score: 73.2 bits (178), Expect = 1.430e-13
Identity = 39/58 (67.24%), Postives = 45/58 (77.59%), Query Frame = 0
Query:    1 PEREADTQTDDFHERPPTPDFVPKKTGVDAWTQIEVSDKLFDFEAEVQPMLAVLVGKV 58
            PE +  TQTD F +RPPTP FVP+KTG DA TQIE  D LFDF+ EV+P+L VLVGKV
Sbjct:  111 PEADTSTQTDAFLDRPPTPLFVPQKTGTDAITQIENGD-LFDFDFEVEPILEVLVGKV 167          
BLAST of mRNA_Ecto-sp13_S_contig73147.18478.1 vs. uniprot
Match: RSP3_CHLRE (Flagellar radial spoke protein 3 n=4 Tax=Chlamydomonas TaxID=3052 RepID=RSP3_CHLRE)

HSP 1 Score: 73.2 bits (178), Expect = 1.430e-13
Identity = 39/58 (67.24%), Postives = 45/58 (77.59%), Query Frame = 0
Query:    1 PEREADTQTDDFHERPPTPDFVPKKTGVDAWTQIEVSDKLFDFEAEVQPMLAVLVGKV 58
            PE +  TQTD F +RPPTP FVP+KTG DA TQIE  D LFDF+ EV+P+L VLVGKV
Sbjct:  113 PEADTSTQTDAFLDRPPTPLFVPQKTGTDAITQIENGD-LFDFDFEVEPILEVLVGKV 169          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig73147.18478.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KBC6_9PHAE4.340e-2996.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FP98_ECTSI9.770e-2896.49Flagellar radial spoke protein n=1 Tax=Ectocarpus ... [more]
A0A7J7Q4Y5_9CHLO7.620e-1465.52Radial spoke protein 3-domain-containing protein n... [more]
A0A2R5GH80_9STRA9.130e-1466.67Radial spoke head protein 3-like n=1 Tax=Hondaea f... [more]
A0A383WN54_TETOB1.060e-1365.52Uncharacterized protein n=1 Tax=Tetradesmus obliqu... [more]
A0A836BU12_9CHLO1.410e-1367.24Uncharacterized protein n=1 Tax=Edaphochlamys deba... [more]
A0A2V0PE13_9CHLO1.420e-1365.52Radial spoke n=1 Tax=Raphidocelis subcapitata TaxI... [more]
D8U522_VOLCA1.430e-1367.24Uncharacterized protein n=5 Tax=Volvox TaxID=3066 ... [more]
A0A150GHZ9_GONPE1.430e-1367.24RSP3 protein n=1 Tax=Gonium pectorale TaxID=33097 ... [more]
RSP3_CHLRE1.430e-1367.24Flagellar radial spoke protein 3 n=4 Tax=Chlamydom... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009290Radial spoke 3PFAMPF06098Radial_spoke_3coord: 1..58
e-value: 2.2E-26
score: 92.8
IPR009290Radial spoke 3PANTHERPTHR21648FLAGELLAR RADIAL SPOKE PROTEIN 3coord: 1..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig73147contigEcto-sp13_S_contig73147:350..547 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig73147.18478.1mRNA_Ecto-sp13_S_contig73147.18478.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig73147 350..547 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig73147.18478.1 ID=prot_Ecto-sp13_S_contig73147.18478.1|Name=mRNA_Ecto-sp13_S_contig73147.18478.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=66bp
PEREADTQTDDFHERPPTPDFVPKKTGVDAWTQIEVSDKLFDFEAEVQPM
LAVLVGKVRGTPNFL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009290Radial_spoke_3