prot_Ecto-sp13_S_contig73126.18476.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig73126.18476.1
Unique Nameprot_Ecto-sp13_S_contig73126.18476.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length45
Homology
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BLAST of mRNA_Ecto-sp13_S_contig73126.18476.1 vs. uniprot
Match: D7FLM2_ECTSI (Tetratricopeptide repeat domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLM2_ECTSI)

HSP 1 Score: 88.2 bits (217), Expect = 3.030e-19
Identity = 42/44 (95.45%), Postives = 43/44 (97.73%), Query Frame = 0 
Query:    2 NVNEAYRAEDLARWKPRQLKELLTDLGLDASGCVEKRDIVDKIM 45
            NVNEAYRAEDLARWKP QLKELLT+LGLDASGCVEKRDIVDKIM
Sbjct:  795 NVNEAYRAEDLARWKPGQLKELLTNLGLDASGCVEKRDIVDKIM 838
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BLAST of mRNA_Ecto-sp13_S_contig73126.18476.1 vs. uniprot
Match: A0A6H5JBP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBP1_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 8.300e-17
Identity = 40/44 (90.91%), Postives = 40/44 (90.91%), Query Frame = 0 
Query:    2 NVNEAYRAEDLARWKPRQLKELLTDLGLDASGCVEKRDIVDKIM 45
            NVNEAYRAE LARWKP QLKELLTDL LDASG VEKRDIVDKIM
Sbjct:  316 NVNEAYRAESLARWKPAQLKELLTDLRLDASGSVEKRDIVDKIM 359
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig73126.18476.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FLM2_ECTSI3.030e-1995.45Tetratricopeptide repeat domain protein n=1 Tax=Ec... [more]
A0A6H5JBP1_9PHAE8.300e-1790.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019345Armet proteinPFAMPF10208Armetcoord: 8..44
e-value: 2.4E-5
score: 24.3
IPR036361SAP domain superfamilyGENE3D1.10.720.30coord: 6..45
e-value: 8.8E-8
score: 33.5
IPR036361SAP domain superfamilySUPERFAMILY68906SAP domaincoord: 9..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig73126contigEcto-sp13_S_contig73126:500..634 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig73126.18476.1mRNA_Ecto-sp13_S_contig73126.18476.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig73126 500..634 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig73126.18476.1 ID=prot_Ecto-sp13_S_contig73126.18476.1|Name=mRNA_Ecto-sp13_S_contig73126.18476.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=45bp
GNVNEAYRAEDLARWKPRQLKELLTDLGLDASGCVEKRDIVDKIM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019345Armet_prot
IPR036361SAP_dom_sf