prot_Ecto-sp13_S_contig72987.18456.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig72987.18456.1
Unique Nameprot_Ecto-sp13_S_contig72987.18456.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length110
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig72987.18456.1 vs. uniprot
Match: D7G3L1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3L1_ECTSI)

HSP 1 Score: 144 bits (362), Expect = 5.870e-42
Identity = 89/112 (79.46%), Postives = 90/112 (80.36%), Query Frame = 0 
Query:    1 MFGAAVRSGKAAMRLTRPDDTDYQAMLDGEAGVVEPHPQQASIIRRNDAXXXXXASCDGG-PAD-LAADGAGADKGRKSKLYSVAGYIIVTEFCERLAYYGFSGSPHLVLVF 110
            MFGAAVRSGKAAMRLTRPDDTDYQAMLDGEAGVVEPH Q          XXXXX       PAD  AADGAGADKGRKSKLYSVAGYIIVTEFCERLAYYGFSGS  LVL+F
Sbjct:    1 MFGAAVRSGKAAMRLTRPDDTDYQAMLDGEAGVVEPHQQXXXXXXXXXXXXXXXXXXXXXXPADPAAADGAGADKGRKSKLYSVAGYIIVTEFCERLAYYGFSGS--LVLLF 110
[Close]
BLAST of mRNA_Ecto-sp13_S_contig72987.18456.1 vs. uniprot
Match: A0A6H5J9H6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9H6_9PHAE)

HSP 1 Score: 152 bits (385), Expect = 6.290e-41
Identity = 91/111 (81.98%), Postives = 92/111 (82.88%), Query Frame = 0 
Query:    1 MFGAAVRSGKAAMRLTRPDDTDYQAMLDGEAGVVEPHPQQASIIRRNDAXXXXXASCD-GGPADLAADGAGADKGRKSKLYSVAGYIIVTEFCERLAYYGFSGSPHLVLVF 110
            MFGA VRSGKAAMRLTRPDDTDYQAMLDGEAG VEPH QQAS       XXXXX     GGPAD AADGAGA KGRKSKLYSVAGYIIVTEFCERLAYYGFSGS  LVL+F
Sbjct:    1 MFGATVRSGKAAMRLTRPDDTDYQAMLDGEAGEVEPHQQQASXXXXXXXXXXXXXXXXXGGPADPAADGAGAGKGRKSKLYSVAGYIIVTEFCERLAYYGFSGS--LVLLF 109
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig72987.18456.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G3L1_ECTSI5.870e-4279.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J9H6_9PHAE6.290e-4181.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig72987contigEcto-sp13_S_contig72987:328..657 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig72987.18456.1mRNA_Ecto-sp13_S_contig72987.18456.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig72987 328..657 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig72987.18456.1 ID=prot_Ecto-sp13_S_contig72987.18456.1|Name=mRNA_Ecto-sp13_S_contig72987.18456.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=110bp
MFGAAVRSGKAAMRLTRPDDTDYQAMLDGEAGVVEPHPQQASIIRRNDAA
AAAAASCDGGPADLAADGAGADKGRKSKLYSVAGYIIVTEFCERLAYYGF
SGSPHLVLVF
back to top