prot_Ecto-sp13_S_contig10155.184.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig10155.184.1
Unique Name	prot_Ecto-sp13_S_contig10155.184.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	438

Homology

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BLAST of mRNA_Ecto-sp13_S_contig10155.184.1 vs. uniprot
Match: D7FNG7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNG7_ECTSI)

HSP 1 Score: 726 bits (1875), Expect = 8.940e-258
Identity = 399/449 (88.86%), Postives = 404/449 (89.98%), Query Frame = 0

Query:    1 TQQASAQTGLFGAAPAA-AAPAPGQXXXXXXXXXXXXXSVSEGAAERREEFMLDSLVCAVEVLFFIYYSYQIKPGEAKQLVTLVETAGRELLALQKTVAETDGITPTATAATAGGGGLHYTNGLSGYGFGHGAXXXXXXXXXAGVTGSFGAFVGGGG----------DEAERHRDVFRLCAALEVTSVLLCTLSMALSQNNALYSRSVPGAKNNGRNALNALALVVGGGGGQPLGDGDKEVILHLNKEICSREWDHSQVQGAVMMVWASFIAPFASGGQTVADTDADKQLRQVMAAAAVNGAVKFLRGPVLTVLRRPPFAARSVAPRPFYLEALSGLAATYVGILLDAKTNCRFPYRFKEQLDHLQANWNHSVNAGGPGVAPELLSQLRKEDTLEDLIFWTGQLSEAHPEFADKRLWLERDDESLPMFFSAMATPIEHRDTLGPLLCFL 438
            + QA A TGLFGAAPAA AAPAPGQ  XXXXXXXXXX S+SEGAAERREEFMLDSLVCAVEVLFFIYYSYQIKP EAKQLVTLVETAGRELLALQKTVAE DGI PTAT ATAGGGGLHYTNGLSGYGFGHGA         AG T                     DEAERHRDVFRLCAALEVTSVLLCTLSMALSQNNALYSRSVPGAKNNG NALNALALVVGGGGGQPLGDGDKEVILHLNKEICSREWDHSQVQGAVMMVWASFIAPFASGGQTVADTDADKQL+QVMAAAAVNGAVKFLRGPVLTVLRRPPFAARSVAPRPFYLEALSGLAATYVGILLDAK NCRFPYRFKEQLDHL+ANWNHSVNAGGPGVAPELLSQLRKEDTLEDLIFWTGQLSEAHPEFADKRLWLERDDESLP FFSAMATP+EHRDTLGPLLCFL
Sbjct:  210 SSQAGAPTGLFGAAPAATAAPAPGQAGXXXXXXXXXX-SMSEGAAERREEFMLDSLVCAVEVLFFIYYSYQIKPDEAKQLVTLVETAGRELLALQKTVAEADGIPPTATPATAGGGGLHYTNGLSGYGFGHGATA-------AGATXXXXXXXXXXXXXXXXXXXXXDEAERHRDVFRLCAALEVTSVLLCTLSMALSQNNALYSRSVPGAKNNGSNALNALALVVGGGGGQPLGDGDKEVILHLNKEICSREWDHSQVQGAVMMVWASFIAPFASGGQTVADTDADKQLQQVMAAAAVNGAVKFLRGPVLTVLRRPPFAARSVAPRPFYLEALSGLAATYVGILLDAKRNCRFPYRFKEQLDHLRANWNHSVNAGGPGVAPELLSQLRKEDTLEDLIFWTGQLSEAHPEFADKRLWLERDDESLPTFFSAMATPVEHRDTLGPLLCFL 650

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BLAST of mRNA_Ecto-sp13_S_contig10155.184.1 vs. uniprot
Match: A0A6H5L8I6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8I6_9PHAE)

HSP 1 Score: 377 bits (968), Expect = 3.450e-127
Identity = 206/242 (85.12%), Postives = 210/242 (86.78%), Query Frame = 0

Query:   80 VTLVETAGRELLALQKTVAETDGITPTATAATAGGGGLHYTNGLSGYGFGHGAXXXXXXXXXAGVTGSFGAFVGGG--------GDEAERHRDVFRLCAALEVTSVLLCTLSMALSQNNALYSRSVPGAKNNGRNALNALALVVGGGGGQPLGDGDKEVILHLNKEICSREWDHSQVQGAVMMVWASFIAPFASGGQTVADTDADKQLRQVMAAAAVNGAVKFLRGPVLTVLRRPPFAARSV 313
            VTLVETAGRELLALQKTVA+TDGI PTAT ATAGGGG+HYTNGLSG GFGHGA         AG T                  GDE ERHRDVFRLCAALEVTSVLLCTLSMALSQNNALYSRS+PGAKNNGRNALNALALVVGGGGGQPLGDGDKEVILHLNKEICSREWDHSQVQGAVMMVWASFIAPFASGGQTVADTDADKQL+QVMAAAAVNGAVKFLRGPVLTVLRRPPFAARSV
Sbjct:    9 VTLVETAGRELLALQKTVADTDGIPPTATPATAGGGGVHYTNGLSGCGFGHGATA-------AGATXXXXXXXXXXXXXXXXXXGDETERHRDVFRLCAALEVTSVLLCTLSMALSQNNALYSRSLPGAKNNGRNALNALALVVGGGGGQPLGDGDKEVILHLNKEICSREWDHSQVQGAVMMVWASFIAPFASGGQTVADTDADKQLQQVMAAAAVNGAVKFLRGPVLTVLRRPPFAARSV 243

[Close]

BLAST of mRNA_Ecto-sp13_S_contig10155.184.1 vs. uniprot
Match: A0A6H5L7W6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7W6_9PHAE)

HSP 1 Score: 71.6 bits (174), Expect = 2.440e-10
Identity = 54/70 (77.14%), Postives = 55/70 (78.57%), Query Frame = 0

Query:    1 TQQASAQTGLFGAAPAAAAPAPGQXXXXXXXXXXXXXSVSEGAAERREEFMLDSLVCAVEVLFFIYYSYQ 70
            + QA A TGLFGAAPA          XXXXXXXXXXX  SEGAAERREEFMLDSLVCAVEVLFFIYYSYQ
Sbjct:  189 SSQAGAPTGLFGAAPA----------XXXXXXXXXXXXXSEGAAERREEFMLDSLVCAVEVLFFIYYSYQ 248

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig10155.184.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig10155.184.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D7FNG7_ECTSI	8.940e-258	88.86	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5L8I6_9PHAE	3.450e-127	85.12	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5L7W6_9PHAE	2.440e-10	77.14	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..34
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 17..34
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 70..164
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 187..438
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 165..186
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 4..16
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 35..49
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..3
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 50..69

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig10155	contig	Ecto-sp13_S_contig10155:397..5830 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig10155.184.1	mRNA_Ecto-sp13_S_contig10155.184.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig10155 397..5830 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig10155.184.1 ID=prot_Ecto-sp13_S_contig10155.184.1|Name=mRNA_Ecto-sp13_S_contig10155.184.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=438bp
TQQASAQTGLFGAAPAAAAPAPGQAGGAAAAAAAAAGSVSEGAAERREEF
MLDSLVCAVEVLFFIYYSYQIKPGEAKQLVTLVETAGRELLALQKTVAET
DGITPTATAATAGGGGLHYTNGLSGYGFGHGATAAAAPAAAAGVTGSFGA
FVGGGGDEAERHRDVFRLCAALEVTSVLLCTLSMALSQNNALYSRSVPGA
KNNGRNALNALALVVGGGGGQPLGDGDKEVILHLNKEICSREWDHSQVQG
AVMMVWASFIAPFASGGQTVADTDADKQLRQVMAAAAVNGAVKFLRGPVL
TVLRRPPFAARSVAPRPFYLEALSGLAATYVGILLDAKTNCRFPYRFKEQ
LDHLQANWNHSVNAGGPGVAPELLSQLRKEDTLEDLIFWTGQLSEAHPEF
ADKRLWLERDDESLPMFFSAMATPIEHRDTLGPLLCFL