mRNA_Ecto-sp13_S_contig7222.18350.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7222.18350.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI) HSP 1 Score: 651 bits (1680), Expect = 6.300e-231 Identity = 341/445 (76.63%), Postives = 365/445 (82.02%), Query Frame = 1
Query: 16 CVRRRLKSATRQQWR*RKMDPVANLHELNQLHRAVLVGSAERTQAVLARGTVDIDQLNSYGATPLMMAVHNGHSRIVKILIKKGANVSMADKQGFTALHFCCAREEDEAIVKLLAKAGADLDAIIPVEGSTPLHRATHHGNSKVVRALIEAGANPDTQLPDGXXXXXXXXXXXXXXXXXXXXXXXXXPLLIQTSPSGNTTAVPLDVAAEHGHSDIVRGLLQELGIAGCDATSAGAHALAFAALEQHLDIMAILTGAGVVDTGKALYLAAGMGIEASVKFLLRHRYREGGCGVEDAYVNACDIDGNTPLVVCIQGCLSHAPRIVRMLVDAGADTTSPILVMNLKGQVIFTGTPLAFTTLRLRDKIVGEGKPATKEHLHRLEAIRRLLLRVEAAHAVSWLWPSGAPFLGRATESGPEPLLPALKLMLPILNRLTKRRGGLVATLLRW 1350
CV+ R KS T+QQWR RKMDPVAN HELNQLHRAVLVGSAE TQAVLA GTV+IDQ NSYGATPLMMAVHNGHSRI K+LIKKGANVS+ADK+GFTALHFCCAREED+AIVKLLAKAGADLDAIIP EGS PLHRATHH NPD QLPDG PLLIQTSP GNTT VPLD+AA+HGH+D+VR L+QELGI GCDATSAGAHALAFAA QHLDIMAILT AGVVDTGKALYLAAGMG EASVKFLLRHR++EGGCGVE AY+NA D++G TPLVVC QGC S APRIVRMLVDAGADTTSP+ VMNLKG V+F TPLAFT LRLR KIV +GKPATKEHL RLEAI RLLLRV+A HAVSWLWPSGAPF+GRATE+ PEP LPALKLMLPIL R TKRR GLVATLLR+
Sbjct: 79 CVQCRSKSETQQQWRQRKMDPVANPHELNQLHRAVLVGSAELTQAVLAGGTVEIDQRNSYGATPLMMAVHNGHSRIAKMLIKKGANVSIADKRGFTALHFCCAREEDDAIVKLLAKAGADLDAIIPGEGSAPLHRATHHEXXXXXXXXXXXXXNPDCQLPDGSTALHIAAEEGQVAVMRELLRGNANPLLIQTSPPGNTTTVPLDLAAKHGHTDVVRELIQELGIEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDTGKALYLAAGMGHEASVKFLLRHRHKEGGCGVEGAYLNARDVNGYTPLVVCTQGCFSQAPRIVRMLVDAGADTTSPVQVMNLKGGVVFNDTPLAFTKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWPSGAPFIGRATETDPEPPLPALKLMLPILKRRTKRRCGLVATLLRY 523
BLAST of mRNA_Ecto-sp13_S_contig7222.18350.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE) HSP 1 Score: 241 bits (616), Expect = 2.130e-71 Identity = 172/421 (40.86%), Postives = 219/421 (52.02%), Query Frame = 1
Query: 100 NQLHRAVLVGSAERTQAVLARGTVDIDQLNSYGATPLMMAVHNGHSRIVKILIKKGANVSMADKQGFTALHFCCAREEDEAIVKLLAKAGADLDAIIPVEGSTPLHRATHHGNSKVVRALIEAGANPDTQLPDGXXXXXXXXXXXXXXXXXXXXXXXXXPLLIQTSPSGNTTAVPLDVAAEHGHSDIVRGLLQELGIAGCDATSAGAHALAFAALEQHLDIMAILTGAGVVDTGKALYLAAGMGIEASVKFLLRHRYREGGCGVEDAYVNACDIDGNTPLVVCIQGCLSHAPRIVRMLVDAGADTTSPILVMNLKGQVIFTGTPLAFTTLRLRDKIVGEGKPATKEHLHRLEAIRRLLLRVEAAHAVSWLWPSGAPFLGRATESGP----EPLLPALKLMLPILNRLTKRRGGLVATLLRW 1350
N L A GS + +LA G DIDQ N G TPLMMA G+ RIV++L+ KGA V + D A LDA TPL A G + V AL++AG+N +T+ DG PLL S SG +PLDVAA++GH ++V L++++GI GC +S G +AL AAL LDIMAILT AGVVDTG AL +AAG G EA +KFLL R AY+N + G T L+ IQ C PR+V++LV+AGADTTSP+L+ N G+ F TPL T L + KP T E ++LE IRRLLLR EA HAVSWLWPS P + AT G A ++ ++ R T+ R GL+A LLR+
Sbjct: 16 NPLQAAADCGSFKTAANLLASGAFDIDQGNEVGWTPLMMASRGGYPRIVRMLLNKGAQVWVTDXXXXXXXXXXX-XXXXXXXXXXXXXXXALLDAATKQNHCTPLDCAAETGCAASVTALLKAGSNINTRRSDGATPLYTAAWNGNVVAVWLLLLAKADPLLTCASDSGKERFLPLDVAAQNGHREVVNELIRQVGIDGCGGSSGGENALRQAALFSRLDIMAILTDAGVVDTGLALVVAAGYGGEAPLKFLLEQA-RGRKSTDRAAYMNTLNGVGLTSLLDGIQRC---RPRVVQLLVEAGADTTSPVLICNQPGEDDFHITPLGLTMCLLGGR---SAKPLTMEEQNKLEVIRRLLLREEAVHAVSWLWPSDTPTITHATAKGTGRTTATSTAATPFIMLMIGRRTRGRKGLLAALLRY 428
BLAST of mRNA_Ecto-sp13_S_contig7222.18350.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE) HSP 1 Score: 227 bits (579), Expect = 4.040e-66 Identity = 176/455 (38.68%), Postives = 225/455 (49.45%), Query Frame = 1
Query: 100 NQLHRAVLVGSAERTQAVLARGTVDIDQLNSYGATPLMMAVHNGHSRIVKILIKKGANVSMADK----------------------------QGFTALHFCCAREEDEAIVKLLAKAGADLDAII----PVEGSTPLHRATHHGNSKVVRALIEAGANPD-TQLPDGXXXXXXXXXXXXXXXXXXXXXXXXXPLLIQTSPSGNTTAVPLDVAAEHGHSDIVRGLLQELGIAGCDATSAGAHALAFAALEQHLDIMAILTGAGVVDTGKALYLAAGMGIEASVKFLLRHRYREGGCGVEDAYVNACDIDGNTPLVVCIQGCLSHAPRIVRMLVDAGADTTSPILVMNLKGQVIFTGTPLAFTTLRLRDKI--VGEGKPATKEHLHRLEAIRRLLLRVEAAHAVSWLWPSGAPFLGRATESGPE---PLLPALKLMLPILNRLTKRRGGLVATLLRW 1350
N+LH A GS E T VLA G DIDQ N YG T LM+A G++RIV +++ KGA VS+ + T H C +G+TPL+ A GN R L+ A A+P T +PD PSG T +PLD AAE+GH ++V L++++GI GC +S G AL AA ++L+IM ILT AGVVDTG AL +AAG G E +KFLL R E AYVN D G TPL+ IQ + PR+VR+LV+AGADTTSP+ V N G + TPL T +RDK+ VG G PA+ E LH+LEAIRRLLLRVEA HAVSWLWPS + RA G + + A+ L + + R + R +A LLR+
Sbjct: 16 NRLHAAAECGSFEATATVLASGAFDIDQGNEYGWTALMLASRGGYARIVGMILNKGAQVSITXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVEATTTQHLCXXXXXXXXXXXXXXXXXXXXXXXNLNSRRSDGATPLYTAAWKGNVDAARLLLLAKADPLLTTVPD---------------------------------PSGRTF-LPLDAAAENGHPEVVNELIRQVGIDGCGGSSGGVRALQQAAQFKNLNIMVILTNAGVVDTGLALVVAAGYGGETPLKFLLEQA-RARKTMDEAAYVNTRDRGGVTPLLWGIQ---HYRPRVVRLLVEAGADTTSPVAVRNQLGGDDVSITPLGLTMNPVRDKVKVVGRG-PASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDISTITRAAARGTDRTTAISTAVTLPMLVTRRRARGRKVPLAALLRY 431
BLAST of mRNA_Ecto-sp13_S_contig7222.18350.1 vs. uniprot
Match: D8LJF9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI) HSP 1 Score: 225 bits (573), Expect = 2.330e-65 Identity = 170/459 (37.04%), Postives = 223/459 (48.58%), Query Frame = 1
Query: 97 LNQLHRAVLVGSAERTQAVLARGTVDIDQLNSYGATPLMMAVHNGHSRIVKILIKKGANVSMADKQGFTALHFCCAREEDEAIVKLLAKAGA--------------------------------DLDAIIPVEGSTPLHRATHHGNSKVVRALIEAGANPDTQLPDGXXXXXXXXXXXXXXXXXXXXXXXXXPLLIQTSPSGNTTAVPLDVAAEHGHSDIVRGLLQELGIAGCDATSAGAHALAFAALEQHLDIMAILTGAGVVDTGKALYLAAGMGIEASVKFLLRHRYREGGCGVEDAYVNACDIDGNTPLVVCIQGC----LSHAPRIVRMLVDAGADTTSPILVMNLKGQVIFTGTPLAFTTLRLRDKIVGEGKPATKEHLHRLEAIRRLLLRVEAAHAVSWLWPSGAPFLGRATESGPE------PLLPALKLMLPILNRLTKRRGGLVATLLR 1347
+N LH A GS ERT +LA G+ DI+Q TPL+ A GHS ++ IL+ KGANVS+ G TALH ++D PV+G TPL RA G + R L+ A ANP LI +P T +PLD AA +G+ ++R L+Q +GI GC S G AL A + + MA+LT AGVVDTG+AL ++AG+G EASVK+LL++ + G G AYVN D +G TPL+ I C S PR+ R+LV+AGADTT+ + N G V+F+ TPL T L+DK V +G +K+ L RLE IRRLLL+VEA HA SWLWPS + GR ++ E P L +LPIL R +R G + L R
Sbjct: 1 MNSLHDAAFKGSTERTAELLATGSWDINQGTVNNWTPLIFAASMGHSSVLGILLSKGANVSIVTDTGVTALHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVDIRTPVDGETPLFRAMTEGQLEATRELLRANANP----------------------------------LITRAPL--PTLLPLDSAARNGNLLVMRELIQRVGIEGCGGQSRGEVALLMAGEGRRVAAMALLTHAGVVDTGQALTISAGLGREASVKYLLQNHAKHYGPG---AYVNVRDRNGTTPLLSSIYVCGVDEQSSFPRVARLLVEAGADTTTELRRTNSMGVVLFSCTPLKLTVHILQDKKV-DGTYISKQRLWRLEGIRRLLLQVEAVHAESWLWPSSSGDGGRRPDNAAEVTTATNAAAPKLGRVLPILRRRARRPGVVWTALCR 419
BLAST of mRNA_Ecto-sp13_S_contig7222.18350.1 vs. uniprot
Match: D7FVU0_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU0_ECTSI) HSP 1 Score: 219 bits (557), Expect = 2.010e-63 Identity = 130/227 (57.27%), Postives = 150/227 (66.08%), Query Frame = 1
Query: 580 LLIQTSPSGNTTAVPLDVAAEHGHSDIVRGLLQELGIAGCDATSAGAHALAFAALEQHLDIMAILTGAGVVDT-GKALYLAAGMGIEASVKFLLRHRYREGGCGVEDAYVNACDIDGNTPLVVCIQGCLSHAPRIVRMLVDAGADTTSPILVMNLKGQVIFTGTPLAFTTLRLRDKIVGEGKPATKEHLHRLEAIRRLLLRVEAAHAVSWLWPSGAPFLGRATESGP 1257
+ IQ S VPLDVAA GHS +VR L+QELGI GC+ +AG AL AA ++ LD +AILTGAG VDT G AL AA EAS K LR R +E GVE A +N G T LV IQ CLS PRIVR+L++AGADTTS I N +G+V GTPLA TT L +KI+ G+PAT+EHL RLEAIRRLLLR EA HAVSWLWPS A F+G A E P
Sbjct: 158 ICIQPPSSSGFPGVPLDVAASSGHSGVVRHLVQELGIKGCNPENAGKQALLLAASKRDLDTLAILTGAGAVDTSGSALMCAA----EASFKHFLRQRLKEEKGGVEYASINDRISSGLTALVFSIQRCLSQTPRIVRLLINAGADTTSVIRGTNSEGEVQCNGTPLALTTSYLWEKILDNGEPATEEHLQRLEAIRRLLLRAEAVHAVSWLWPSDASFVGHAAEKWP 380
BLAST of mRNA_Ecto-sp13_S_contig7222.18350.1 vs. uniprot
Match: D8LDX5_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDX5_ECTSI) HSP 1 Score: 214 bits (545), Expect = 3.440e-62 Identity = 156/273 (57.14%), Postives = 190/273 (69.60%), Query Frame = 1
Query: 364 AGADLDAIIPVEGSTPLHRATHHGNSKVVRALIEAGANPDTQLPDGXXXXXXXXXXXXXXXXXXXXXXXXXPLLIQT-SPSGNTTAVPLDVAAEHGHSDIVRGLLQELGIAGCDATSAGAHALAFAALEQHLDIMAILTGAGVVD-TGKALYLAAGMGIEASVKFLLRHRYREGGCGVEDAYVNACDIDGNTPLVVCIQGCLSHAPRIVRMLVDAGADTTSPILVMNLKGQVIFTGTPLAFTTLRLRDKIVGEGKPATKEHLHRLEAIRRLLL 1176
AGADL+ ++ +GSTPLH+ G S+VV +I A ANP++++ G XXXXXXXXXXXXXXXXXXXXXXXX L + + S TA+P+DVA ++GHSD+VR L+Q G +A S AL FAA EQHL IMAILTGAGVVD G +L AA +EASVKFLLR RY E VE +YVNA D DG TPL IQ C SHA RI+R+L DAGAD S + V N GQ ++GTPLA T +R+K++ G PAT+EHL+ LEAI RLLL
Sbjct: 4 AGADLE-VMTSQGSTPLHKDALEGRSEVVGVMIRALANPNSRMLCGAXXXXXXXXXXXXXXXXXXXXXXXXXFLTKKGNSSSGDTAIPMDVAVQNGHSDVVRKLVQWRGCGVANAGSQACQALFFAASEQHLVIMAILTGAGVVDWVGLSLLGAAESALEASVKFLLRQRYHESTRSVEYSYVNASDTDGWTPLAHSIQRCCSHAARIIRLLFDAGADVASAVRVTNSNGQQEYSGTPLAVVTSCIREKVLANGTPATEEHLYMLEAIGRLLL 275
BLAST of mRNA_Ecto-sp13_S_contig7222.18350.1 vs. uniprot
Match: D8LSC5_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC5_ECTSI) HSP 1 Score: 205 bits (521), Expect = 5.840e-60 Identity = 123/205 (60.00%), Postives = 140/205 (68.29%), Query Frame = 1
Query: 742 LEQHLDIMAILTGAGVVDT-GKALYLAAGMGIEASVKFLLRHRYREGGCGVEDAYVNACDIDGNTPLVVCIQGCLSHAPRIVRMLVDAGADTTSPILVMNLKGQVIFTGTPLAFTTLRLRDKIVGEGKPATKEHLHRLEAIRRLLLRVEAAHAVSWLWPSGAPFLGRATES--GPEPLLPALKLMLPILNRLTKRRGGLVATLLR 1347
+ QH+DIMAILTGAGV D G L AG+G EASV+FLLR R +E V AY N+ D G TPL I+ C S PRIVR+LVDAGADTTS + V NL G V + TPLA TT LR+K+V +GKPAT+E LHRL+AIRRLLLRV+A HAVSWLWPS AP + A E GPEP P L L LPIL R K VATLLR
Sbjct: 1 MNQHMDIMAILTGAGVRDAMGYVLLGTAGLGREASVQFLLRQRRKESEMSVH-AYANSSDGSGMTPLSCSIEWCSSGNPRIVRLLVDAGADTTSTVRVTNLNGGVEYNDTPLAVTTSLLREKVV-DGKPATEEQLHRLQAIRRLLLRVDAVHAVSWLWPSDAPSIVHAVERSCGPEPRRPPLSLTLPILKRRAKTCHVFVATLLR 203
BLAST of mRNA_Ecto-sp13_S_contig7222.18350.1 vs. uniprot
Match: A0A6H5JL33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL33_9PHAE) HSP 1 Score: 205 bits (521), Expect = 8.650e-58 Identity = 159/368 (43.21%), Postives = 213/368 (57.88%), Query Frame = 1
Query: 100 NQLHRAVLVGSAERTQAVLA-RGTVDIDQLNSYGATPLMMAVHNGHSRIVKILIKKGANVSMADKQGFTALHFCCAREEDEAIVKLLAKAGADLDAIIPVEGSTPLHRATHHGNSKVVRALIEAGANPDTQLPDGXXXXXXXXXXXXXXXXXXXXXXXXXPLLIQTSPSGNTTAVPLDVAAEHGHSDIVRGLLQELGIAGCDATSAGAHALAFAALEQHLDIMAILTGAGVVDTGKALYLAAGMGIEASVKFLLRHRYREGGCGVEDAYVNAC-DIDGNTPLVVCIQGCLSH---APRIVRMLVDAGADTTSPILVMNLKGQVIFTGTPLAFTTLRLRDKIVGEGKPATKEHLHRLEAIRRLLLRVEA 1188
N LHRA GS ER A+LA R ++ ID YG TPLM+A G SR+V+IL+ KGANVS+ + G TALHF ++ +V A + G +V + XXXXXXXXXXXXXXXXXXXX PLL + +PSG T VPLD AAE+G +++VR L++++ I GC S G +AL AAL Q++D+M++L AGV+DTG+AL AAG EA VK LL+ R+ G YVN D+ G TPL+ I G ++ +PR+VR+LVDAGADT S + + GQ+ + TP+ F T L + + G GK A ++H+H+L AI RL +VEA
Sbjct: 17 NDLHRAANDGSVERVVALLASRSSIAIDAGAEYGWTPLMLAAWRGSSRVVRILLNKGANVSVVAEDGHTALHFST-QDGGHPVVTXXXXXXXXXXXXXXXXXXXXXXLAANAGCWEVAQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAKANPLLTKPTPSG-VTFVPLDTAAEYGQTEVVRELIKQVSIKGCGGASGGVYALRLAALSQNVDVMSVLADAGVMDTGEALITAAGRNDEAGVKLLLQQRHGTSAGGELYMYVNDTHDLVGRTPLLCSIDGGMAGFRCSPRVVRLLVDAGADTVSAVPLKGTAGQIGRSVTPIDFATCSLHENMDG-GKTAMEKHVHKLRAIHRLFSQVEA 381
BLAST of mRNA_Ecto-sp13_S_contig7222.18350.1 vs. uniprot
Match: D7G1U9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U9_ECTSI) HSP 1 Score: 197 bits (502), Expect = 9.130e-55 Identity = 172/421 (40.86%), Postives = 212/421 (50.36%), Query Frame = 1
Query: 100 NQLHRAVLVGSAERTQAVLARGTVDIDQLNSYGATPLMMAVHNGHSRIVKILIKKGANVSMADKQGFTALHFCCAREEDEAIVKLLAKAGADLDAIIPVEGSTPLHRATHHGNSKVVRALIEAGANPDTQLPDGXXXXXXXXXXXXXXXXXXXXXXXXXPLLIQTSPSGNTTAVPLDVAAEHGHSDIVRGLLQELGIAGCDATSAGAHALAFAALEQHLDIMAILTGAGVVDTGKALYLAAGMGIEASVKFLLRHRYREGGCGVEDAYVNACDIDGNTPLVVCIQGCLSHAPRIVRMLVDAGADTTSPILVMNLKGQVIFTGTPLAFTTLRLRDKIVGEGKPATKEHLHRLEAIRRLLLRVEAAHAVSWLWPSGAPFLGRATESG-----PEPLLPALKLMLPILNRLTKRRGGLVATLLR 1347
NQLH+A GSA+R A+L+ G+VDI+Q N G TPLM+A GHS + K L++KGANVS+A G XXXXXXXXXXXXXXXXXXXXXXXXX + +HGHS++VR L+Q+LG+ GC SAG +L AA EQ++DIM ILT GVVDTG+AL +AA E SVKFLL+H+ G V N D G TPLV I+ C S +PRI R L+D GADT S +LV TPL F T LR VG GK AT+E L L+AI RLL ++EA HAVSWLW S +G A + P P LK M +L +RG ++ + R
Sbjct: 34 NQLHKAAYHGSADRVDALLSTGSVDINQGNPKGWTPLMLATEKGHSLVAKSLLEKGANVSVAGD-------------------------GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQKQHGHSEVVRELIQQLGVRGCGGVSAGVESLRLAATEQYVDIMGILTVGGVVDTGRALVVAAEYSREESVKFLLQHQAGGGTWYVN----NTLDPFGRTPLVCTIEACGSSSPRIARFLIDDGADTKSTVLVTRSGEWTTSRDTPLGFATRSLRQNKVG-GKNATEEQLRSLKAIHRLLSQIEAVHAVSWLWRSSDTPIGHAVGAASSRMKPTTAGPTLKRMSTVLRTTVGKRGVVLRAVYR 424
BLAST of mRNA_Ecto-sp13_S_contig7222.18350.1 vs. uniprot
Match: A0A6H5K037_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K037_9PHAE) HSP 1 Score: 191 bits (484), Expect = 2.190e-52 Identity = 169/407 (41.52%), Postives = 204/407 (50.12%), Query Frame = 1
Query: 127 GSAERTQAVLARGTVDIDQLNSYGATPLMMAVHNGHSRIVKILIKKGANVSMADKQGFTALHFCCAREEDEAIVKLLAKAGADLDAIIPVEGSTPLHRATHHGNSKVVRALIEAGANPDTQLPDGXXXXXXXXXXXXXXXXXXXXXXXXXPLLIQTSPSGNTTAVPLDVAAEHGHSDIVRGLLQELGIAGCDATSAGAHALAFAALEQHLDIMAILTGAGVVDTGKALYLAAGMGIEASVKFLLRHRYREGGCGVEDAYVNACDIDGNTPLVVCIQGCLSHAPRIVRMLVDAGADTTSPILVMNLKGQVIFTGTPLAFTTLRLRDKIVGEGKPATKEHLHRLEAIRRLLLRVEAAHAVSWLWPSGAP---FLGRATESGPEPLL--PALKLMLPILNRLTKRRGGLV 1332
GSA+R A+L+ G+VDI+Q N G TPLM+AV G SR+ K L+ KGANVS+ G XXXXXXXXXXXXXXXXXXXX L +PSG T VPLDVA +HGHS++VR L +LG+ GC S G +L A EQ +DIM ILT GVVDTG+AL +AA E SVKFLL+H+ G V N D G TPLV I+ C S +PRI R L+DA ADT S +LV TPL F T LR VG K AT+E L L+AI RLL +V+A HAVSWLW S + A S +P + P LK M +L +RG +V
Sbjct: 10 GSADRVDALLSMGSVDINQGNPKGWTPLMLAVEKGLSRVTKSLLGKGANVSVVG-DGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKANTLLASVPAPSG-ATFVPLDVAVQHGHSEVVRELTHQLGVRGCGGVSGGVESLRLATTEQDVDIMGILTVGGVVDTGRALVVAAENSREESVKFLLQHQAGGGAWYVN----NTLDPFGRTPLVCTIEACGSSSPRIARFLIDAEADTKSTVLVTKSGQWTTSRDTPLGFATHSLRQNKVGR-KNATEEQLRSLKAIHRLLSQVDAVHAVSWLWRSSDTRNSYAVGAASSRMKPTIAGPLLKRMPTVLRTTVGKRGVVV 409 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7222.18350.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7222.18350.1 >prot_Ecto-sp13_S_contig7222.18350.1 ID=prot_Ecto-sp13_S_contig7222.18350.1|Name=mRNA_Ecto-sp13_S_contig7222.18350.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=427bp MDPVANLHELNQLHRAVLVGSAERTQAVLARGTVDIDQLNSYGATPLMMAback to top mRNA from alignment at Ecto-sp13_S_contig7222:5738..7087+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7222.18350.1 ID=mRNA_Ecto-sp13_S_contig7222.18350.1|Name=mRNA_Ecto-sp13_S_contig7222.18350.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1350bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7222:5738..7087+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7222:5738..7087+ >mRNA_Ecto-sp13_S_contig7222.18350.1 ID=mRNA_Ecto-sp13_S_contig7222.18350.1|Name=mRNA_Ecto-sp13_S_contig7222.18350.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1281bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7222:5738..7087+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |