|
|
Homology
BLAST of mRNA_Ecto-sp13_S_contig718.18296.1 vs. uniprot
Match: A0A6H5KKY5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKY5_9PHAE) HSP 1 Score: 2126 bits (5509), Expect = 0.000e+0 Identity = 1355/1612 (84.06%), Postives = 1377/1612 (85.42%), Query Frame = 2
Query: 176 MAASAHSKDETQFWKLVWPPLKDGGWRYELQTPPVAADAGSDQSDEASPSAQTCHSSRRTSPRTRNRMTWSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQMPGKVTVFFPPPVGEASEALEEAMRRAAPADGSRDEERPDHLVGVTSVIELLQQVAGYPGPTTSLGIINFDAVAAAARGVLVRTPSPSKSGSGRREAAARGVAAGAYADEGNTPVIASSRSRSSSISSSDEAVVREELQPWPVTTGGGVQSSAAE------NTELQHNAQPSIDPGSVGPAAAGPAPSQLLSALALSFSSAMSSRGGATAPEGSMSAAXXXXXTAGVSTTAATRLGRVIKKPVRLEHEKPGRQTLAGRNGRADAPAKVAXXXXXXXXXXXXXXXXXXXXXXXXXXTGESAAGLSCVNGKADSQARDVNITGGETTATGKGAKRCVARLGTAAGSEGVVDQGDQSVLLSAGNSSVAMSDASGTASDASSSPAASSVVRMALPADVRTAGAPLRGRDADETGGDGGGDSSRRSRDSVRERDRMVLPDPPPKRPVGELGPLPEDAIKEYKRAFDDVVWPGLAQEFGWKRVRGPRPSDVYYLPPGVVRGQNGSKCRVDYFDSNRQVLIHMAEREEKFGDLLERAWAEAIAKPRLLGRKGXXXXXXXXXXXWTELPRRKATMMKKEYPKKVSLVGTAHQVDPLNLPVPVSSEDYVPPEDVLFEQVWDPSVVVPSPKGKGAPRELAELVKEFAGVVSHDKCLEIVHRFEGDYGEARKLLRNLSRSWKSRYLVASNSTRETASAKAIVARETAARLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASRGGRGHVGRAGALGMQDAFWCRPLKSLAGGEAALKRQVQGGVSSIPPGARSKDKLSPDLNLARPWLPHEAAMYTRAMLEEGSKNFYAAQQKALPGRQVCELVDRYYGGWKQTDGYRALKESIRLSKKQSACGGCHAGGDLICCDGCEAVYHPECVGLSVVPEGDWFCPACVIRRKKEAERPLGQAPSSXXXXXXXXXXXXXARLAGAASGRARVDSAVAATKRENTAGRSKRYSTMTATVTAASVAYVASSKKARTLAKDKGAEGGXXXXXXXXGGVGGRDIGVGTETSRAIAGGVGPXXXXXMRMERVPIQLGIARGAVGGAARVAELVSSGAGGAVATVSASVCPPGTATSAACGRSEAAFGKRPIASETPMHTQHPGKRPARLVKTAAAA-SVRSAEESPPVEVAPLTIAPRPPSSAGGTTAGAAGAQLGQVAAFKATNGATAGKTSAAAGDWGCLGCKHRNRAEDTRCRRCEGLRLVGAEINLKGVPRQSEAPPAAAPLAGKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQASAEPRDAAVALAASDCSTRASLAYTAAPAPLASSDXXXXXXXXXXXXXXXGCRVCSTFNKHTAAVCVSCGTREEVKVKSTDEGKAAEWWNGRKCSRNNNLQHDGTTRKVCSAVGGDDELQVEVGLXXXXXXXXXXXXXXXXXEISVGLDXXXXXXEDQQGLAPPLSGMASTFVQL 4990
MAASA+SKDETQFWKLVWPPLK+GG TP GS MPGKV VFFPPPVGEASEALEEAMRRAAPADGS DEERPD LVGVTSVIELLQQVAGYPGPTTSLGIINFDAVAAAARGVLVRTPSP KSGSGRREA A GVAAGA A EGNTPV+AS RSRSSSISSSDEAVVREELQPWPVTTGGGVQSSAAE NT+LQH AQPSIDPGSVGPAAAGPAPSQLLSALALSFSSAMSSRGGATAPEGSMSAAXXXXX AGVST AATRLGRVIKKPVRLEHE+PGRQ+LAGRNGRADAPAKVAXXXXXXXXXXXXXXXXXXXXXXXX GESAAG SC NGKADSQARDVNITGGETTATGKGAKRCVARLGTAAGSEGVVD GDQ VLLS GN SVA S+ASGTASDASSSPAASSVV MALPADVRTAGAPLRGRDADETGGDGGGDSSRRSRDSVRERDRMVLPDPPPKRPVGELGPLPEDAIKEYKRAFDDVVWPGLAQEFGWKRVRGPRPSDVYYLPPGVVRGQNG+KCRVDYFDSNRQVLIHMAEREEKFGDLLERAWAEAIAKPRLLGRKGXXXXXXXXXXXWTELPRRK+TMMKKEYPKKVSLVGTAHQVDPLNLPVPVSSEDYVPPEDVLFEQVWDPSVVVPSPKGKGAPRELAELVKEFAGVVSHDKCLEIVHRFEGDYGEARKLLRNLSRSWKSRYL+ASNSTRETASAKAIVARETAARLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ASRGGRGHVGRAGA G QDAFWCRPLKSLAGGE+ALKRQVQGGVSSIPPGARSKDKLSPDLNLARPWLPHEAAMYTRAMLEEGSKNFYAAQ KALPGRQVCELVDRYYGGWKQTDGYRALKESIRLSKKQSACGGCHAGGDLICCDGCEAVYHPECVGLSVVPEGDWFCPACVIRRKKEAERPLGQA S XXXXX ARLAGAASGRARVDSAVAATKRENTAGRSKRYSTMTATVTAASVAYVASSKKARTLAKDKGAE G VGGRD VGTETSR IAGGVGP XXXXMRMERVPIQLGIARGAVGGAARVAELVSS AGGA ATVSASVCPPG TS ACGRS AAFGKRPI ETPMHTQHPGKRPARLVKTAAAA S RSAE+SP V+ APLTIAPRP SSAGGTTAG AGAQLGQ AAFK T AAGDWGCLGCKHRNRAEDTRCRRCEGLRLVGAEINLKGVPRQSEAPPAAAPL+GKA XXXX Q++AEP DAAVALAASDCSTRASLAYTAAPAPLASSD GCRVCSTFN+HTAAVCVSCGTR+EVKVK DEGKA EW NGRKCSRN+N QHD TTR+VCSAVGGDDELQVEVGLXXXXXXXXXXXXXXXX EISVGLD EDQQGLAP +SGMAS+FVQL
Sbjct: 1 MAASANSKDETQFWKLVWPPLKNGGI-----TP------GSSH-----------------------------------------------------------------------MPGKVMVFFPPPVGEASEALEEAMRRAAPADGSLDEERPDRLVGVTSVIELLQQVAGYPGPTTSLGIINFDAVAAAARGVLVRTPSPLKSGSGRREATAMGVAAGACAAEGNTPVMASLRSRSSSISSSDEAVVREELQPWPVTTGGGVQSSAAETHPPAENTDLQHKAQPSIDPGSVGPAAAGPAPSQLLSALALSFSSAMSSRGGATAPEGSMSAAXXXXXXAGVSTAAATRLGRVIKKPVRLEHEQPGRQSLAGRNGRADAPAKVAXXXXXXXXXXXXXXXXXXXXXXXX---GESAAGFSCANGKADSQARDVNITGGETTATGKGAKRCVARLGTAAGSEGVVDPGDQIVLLSTGNGSVA-SNASGTASDASSSPAASSVVSMALPADVRTAGAPLRGRDADETGGDGGGDSSRRSRDSVRERDRMVLPDPPPKRPVGELGPLPEDAIKEYKRAFDDVVWPGLAQEFGWKRVRGPRPSDVYYLPPGVVRGQNGAKCRVDYFDSNRQVLIHMAEREEKFGDLLERAWAEAIAKPRLLGRKGXXXXXXXXXXXWTELPRRKSTMMKKEYPKKVSLVGTAHQVDPLNLPVPVSSEDYVPPEDVLFEQVWDPSVVVPSPKGKGAPRELAELVKEFAGVVSHDKCLEIVHRFEGDYGEARKLLRNLSRSWKSRYLMASNSTRETASAKAIVARETAARLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-ASRGGRGHVGRAGAPGTQDAFWCRPLKSLAGGESALKRQVQGGVSSIPPGARSKDKLSPDLNLARPWLPHEAAMYTRAMLEEGSKNFYAAQ-KALPGRQVCELVDRYYGGWKQTDGYRALKESIRLSKKQSACGGCHAGGDLICCDGCEAVYHPECVGLSVVPEGDWFCPACVIRRKKEAERPLGQASSXXXXXXAWTVGGSSARLAGAASGRARVDSAVAATKRENTAGRSKRYSTMTATVTAASVAYVASSKKARTLAKDKGAERGDGSSGGGRAEVGGRDTSVGTETSRVIAGGVGPPXXXXMRMERVPIQLGIARGAVGGAARVAELVSSAAGGAAATVSASVCPPGAETSTACGRSGAAFGKRPIVGETPMHTQHPGKRPARLVKTAAAAASARSAEDSP-VKAAPLTIAPRPLSSAGGTTAGPAGAQLGQAAAFKGTXXXXXXXXXXAAGDWGCLGCKHRNRAEDTRCRRCEGLRLVGAEINLKGVPRQSEAPPAAAPLSGKAPATVSVPIAAAEPTSGAKXXXXASSAESAAWSNASAVADTQSNAEPGDAAVALAASDCSTRASLAYTAAPAPLASSDPRAPAPASAARSSQWGCRVCSTFNEHTAAVCVSCGTRKEVKVKPVDEGKATEWCNGRKCSRNDN-QHDSTTRRVCSAVGGDDELQVEVGLXXXXXXXXXXXXXXXX-EISVGLDEEISVGEDQQGLAPSVSGMASSFVQL 1521
BLAST of mRNA_Ecto-sp13_S_contig718.18296.1 vs. uniprot
Match: A0A7S4D894_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D894_HETAK) HSP 1 Score: 95.5 bits (236), Expect = 1.060e-18 Identity = 50/127 (39.37%), Postives = 70/127 (55.12%), Query Frame = 2
Query: 2996 LNLARPWLPHEAAMYTRAMLEEGSKNFYAAQQKALPG--RQVCELVDRYYGGWKQTDGYRALKESIRLSKK--QSACGGCHAGGDLICCDGCEAVYHPECVG--LSVVPEGDWFCPACVIRRKKEAE 3358
L RPW EAA + RA E + + G R + EL+D YY +K+T+ Y+ LK+ + ++ C C+ GGDLICC+ C+ VYH EC+ LS +PEGDW+CP C R + AE
Sbjct: 12 LKRPRPWRDAEAAAFERACAEHLKDLHRVRRAMSAAGFERSISELMDYYYNKFKKTERYKILKKELIKFRELNNDHCAICNDGGDLICCEACDDVYHMECLDPPLSALPEGDWYCPTCEGHRGQGAE 138
BLAST of mRNA_Ecto-sp13_S_contig718.18296.1 vs. uniprot
Match: A0A7S0J6R7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J6R7_9EUKA) HSP 1 Score: 74.7 bits (182), Expect = 7.090e-11 Identity = 34/94 (36.17%), Postives = 53/94 (56.38%), Query Frame = 2
Query: 3113 VCELVDRYYGGWKQTDGYRALKESIRLSKK-----QSACGGCHAGGDLICCDGCEAVYHPECVGLSVVPEGDWFCPACVIRRKKEAERPLGQAP 3379
+ EL+ +Y ++Q+ YR L ++++ ++ C C A G LICC+ C A +H CVGLSVVPEG+W C AC+ ++ + Q P
Sbjct: 128 IGELLQFFYAQFRQSTEYRKLSQAMKAQREVEDGFDDYCSVCGALGFLICCEWCSAAFHLNCVGLSVVPEGEWKCQACISGKRPRQQAAQLQTP 221
BLAST of mRNA_Ecto-sp13_S_contig718.18296.1 vs. uniprot
Match: A0A7S2Z164_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chloropicon laureae TaxID=464258 RepID=A0A7S2Z164_9CHLO) HSP 1 Score: 72.8 bits (177), Expect = 3.550e-10 Identity = 35/90 (38.89%), Postives = 47/90 (52.22%), Query Frame = 2
Query: 3080 AAQQKALPGRQV----CELVDRYYGGWKQTDGYRALKESIRLSK--KQSACGGCHAGGDLICCDGCEAVYHPECVGLSVVPEGDWFCPAC 3331
A K PG++ ++ + GG +G ++LS C C GG+LICC+GC A +H ECVGL +PEGDWFCP C
Sbjct: 7 AQWSKCAPGKRQRKPSFKMQNHLEGGSSAANGKGTGVSQMQLSLDWNDDLCRICSDGGELICCEGCPASFHKECVGLDAIPEGDWFCPTC 96
BLAST of mRNA_Ecto-sp13_S_contig718.18296.1 vs. uniprot
Match: A0A3Q7HXM3_SOLLC (Uncharacterized protein n=6 Tax=Solanum subgen. Lycopersicon TaxID=49274 RepID=A0A3Q7HXM3_SOLLC) HSP 1 Score: 76.3 bits (186), Expect = 8.460e-10 Identity = 28/55 (50.91%), Postives = 37/55 (67.27%), Query Frame = 2
Query: 3176 KESIRLSKKQSACGGCHAGGDLICCDGCEAVYHPECVGLSVVPEGDWFCPACVIR 3340
KES ++ C CH GGDLI CDGC + +HP+C+G+ VP GDWFCP+C +
Sbjct: 1210 KESSHFTENDYICSVCHYGGDLILCDGCPSSFHPDCLGIKEVPNGDWFCPSCCCK 1264
BLAST of mRNA_Ecto-sp13_S_contig718.18296.1 vs. uniprot
Match: A0A383V592_TETOB (PHD-type domain-containing protein (Fragment) n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383V592_TETOB) HSP 1 Score: 75.9 bits (185), Expect = 8.790e-10 Identity = 29/54 (53.70%), Postives = 37/54 (68.52%), Query Frame = 2
Query: 3173 LKESIRLSKKQSACGGCHAGGDLICCDGCEAVYHPECVGLSVVPEGDWFCPACV 3334
L S + S C C GG+L+CCDGC A YHP C+GL++VP+G WFCP+CV
Sbjct: 743 LVNSTYMDSHISYCVQCKDGGELLCCDGCPAAYHPTCLGLTIVPDGSWFCPSCV 796
BLAST of mRNA_Ecto-sp13_S_contig718.18296.1 vs. uniprot
Match: A0A1J6IFC5_NICAT (Increased dna methylation 1 n=14 Tax=Nicotiana TaxID=4085 RepID=A0A1J6IFC5_NICAT) HSP 1 Score: 75.9 bits (185), Expect = 9.850e-10 Identity = 28/58 (48.28%), Postives = 39/58 (67.24%), Query Frame = 2
Query: 3167 RALKESIRLSKKQSACGGCHAGGDLICCDGCEAVYHPECVGLSVVPEGDWFCPACVIR 3340
RA+K+ R S C CH GG+LI CD C + +HP+C+G+ VP+GDWFCP+C +
Sbjct: 817 RAVKKGSRFSTNDYICSVCHYGGELILCDECPSSFHPDCLGMKEVPDGDWFCPSCCCK 874
BLAST of mRNA_Ecto-sp13_S_contig718.18296.1 vs. uniprot
Match: I0Z7J1_COCSC (Uncharacterized protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z7J1_COCSC) HSP 1 Score: 75.9 bits (185), Expect = 9.910e-10 Identity = 40/108 (37.04%), Postives = 51/108 (47.22%), Query Frame = 2
Query: 3092 KALPGRQVCELVDRYYGGWKQTDGYRALKESIRLSKKQ----------------SACGGCHAGGDLICCDGCEAVYHPECVGLSVVPEGDWFCPACVIRRKKEAERPL 3367
K PG C + + G ++ G ++ +S K+ SACG C GGDL+CCDGC H C GL VPEGDWFC ACV R + +PL
Sbjct: 275 KKTPGVS-CSEFEEHAGSRERRPGESIYLTNLSISLKEFCALVNDEGRSADRHGSACGLCMDGGDLLCCDGCPTAVHAYCAGLEEVPEGDWFCDACVARGAQLKAKPL 381
BLAST of mRNA_Ecto-sp13_S_contig718.18296.1 vs. uniprot
Match: A0A7J7QBX4_9CHLO (Uncharacterized protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QBX4_9CHLO) HSP 1 Score: 75.1 bits (183), Expect = 1.480e-9 Identity = 28/43 (65.12%), Postives = 33/43 (76.74%), Query Frame = 2
Query: 3206 SACGGCHAGGDLICCDGCEAVYHPECVGLSVVPEGDWFCPACV 3334
S C C GGDL+CCDGC A YHP C+GL +VP+G WFCP+CV
Sbjct: 6 SYCVQCRDGGDLMCCDGCPAAYHPACLGLGIVPDGPWFCPSCV 48
BLAST of mRNA_Ecto-sp13_S_contig718.18296.1 vs. uniprot
Match: A0A7J6WIR1_THATH (Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein n=1 Tax=Thalictrum thalictroides TaxID=46969 RepID=A0A7J6WIR1_THATH) HSP 1 Score: 72.0 bits (175), Expect = 2.480e-9 Identity = 25/56 (44.64%), Postives = 34/56 (60.71%), Query Frame = 2
Query: 3164 YRALKESIRLSKKQSACGGCHAGGDLICCDGCEAVYHPECVGLSVVPEGDWFCPAC 3331
Y +++ + CG C GG LICCDGC + YH C+G+ V+P GDW CP+C
Sbjct: 222 YHVIEDDSETDQNDDTCGTCGDGGVLICCDGCPSTYHQSCMGIEVLPAGDWICPSC 277
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Stop | 1 |
| Start | 1 |
| Seed ortholog score | 1615.9 |
| Seed ortholog evalue | 0.0 |
| Seed eggNOG ortholog | 2880.D7FN55 |
| Model size | 6387 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000785,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003824,GO:0004386,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0006325,GO:0006333,GO:0006338,GO:0006996,GO:0008150,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0031491,GO:0034728,GO:0035327,GO:0042623,GO:0042766,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043933,GO:0044422,GO:0044424,GO:0044427,GO:0044446,GO:0044464,GO:0044877,GO:0051276,GO:0070615,GO:0071824,GO:0071840,GO:0097159,GO:1901363 |
| Exons | 11 |
| EggNOG free text desc. | TPL-binding domain in jasmonate signalling |
| EggNOG OGs | 2D07F@1,2SD3A@2759 |
| Ec32 ortholog description | PHD-type zinc finger protein |
| Ec32 ortholog | Ec-06_008460.1 |
| Cds size | 4818 |
| COG Functional cat. | S |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1681463983.7546291-UTR-Ecto-sp13_S_contig718:9642..9721 | 1681463983.7546291-UTR-Ecto-sp13_S_contig718:9642..9721 | Ectocarpus species13 EcNAP12_S_4_19m | UTR | Ecto-sp13_S_contig718 9643..9721 + |
| 1681463983.768137-UTR-Ecto-sp13_S_contig718:10247..10343 | 1681463983.768137-UTR-Ecto-sp13_S_contig718:10247..10343 | Ectocarpus species13 EcNAP12_S_4_19m | UTR | Ecto-sp13_S_contig718 10248..10343 + |
| 1681463983.8804908-UTR-Ecto-sp13_S_contig718:20503..21897 | 1681463983.8804908-UTR-Ecto-sp13_S_contig718:20503..21897 | Ectocarpus species13 EcNAP12_S_4_19m | UTR | Ecto-sp13_S_contig718 20504..21897 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1681463983.779171-CDS-Ecto-sp13_S_contig718:10343..11015 | 1681463983.779171-CDS-Ecto-sp13_S_contig718:10343..11015 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig718 10344..11015 + |
| 1681463983.7893639-CDS-Ecto-sp13_S_contig718:12059..13097 | 1681463983.7893639-CDS-Ecto-sp13_S_contig718:12059..13097 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig718 12060..13097 + |
| 1681463983.7998886-CDS-Ecto-sp13_S_contig718:13931..14078 | 1681463983.7998886-CDS-Ecto-sp13_S_contig718:13931..14078 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig718 13932..14078 + |
| 1681463983.8099694-CDS-Ecto-sp13_S_contig718:14415..14568 | 1681463983.8099694-CDS-Ecto-sp13_S_contig718:14415..14568 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig718 14416..14568 + |
| 1681463983.821303-CDS-Ecto-sp13_S_contig718:14898..14964 | 1681463983.821303-CDS-Ecto-sp13_S_contig718:14898..14964 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig718 14899..14964 + |
| 1681463983.831202-CDS-Ecto-sp13_S_contig718:15389..15569 | 1681463983.831202-CDS-Ecto-sp13_S_contig718:15389..15569 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig718 15390..15569 + |
| 1681463983.8424652-CDS-Ecto-sp13_S_contig718:16016..16673 | 1681463983.8424652-CDS-Ecto-sp13_S_contig718:16016..16673 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig718 16017..16673 + |
| 1681463983.8513825-CDS-Ecto-sp13_S_contig718:17163..17264 | 1681463983.8513825-CDS-Ecto-sp13_S_contig718:17163..17264 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig718 17164..17264 + |
| 1681463983.8605008-CDS-Ecto-sp13_S_contig718:18350..18369 | 1681463983.8605008-CDS-Ecto-sp13_S_contig718:18350..18369 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig718 18351..18369 + |
| 1681463983.87043-CDS-Ecto-sp13_S_contig718:18718..20503 | 1681463983.87043-CDS-Ecto-sp13_S_contig718:18718..20503 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig718 18719..20503 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig718.18296.1 >prot_Ecto-sp13_S_contig718.18296.1 ID=prot_Ecto-sp13_S_contig718.18296.1|Name=mRNA_Ecto-sp13_S_contig718.18296.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1606bp
MAASAHSKDETQFWKLVWPPLKDGGWRYELQTPPVAADAGSDQSDEASPS AQTCHSSRRTSPRTRNRMTWSSSSSSSSSSSSSSTGSSSSSPRRRNPSAA AAAASTGTTAGSSQMPGKVTVFFPPPVGEASEALEEAMRRAAPADGSRDE ERPDHLVGVTSVIELLQQVAGYPGPTTSLGIINFDAVAAAARGVLVRTPS PSKSGSGRREAAARGVAAGAYADEGNTPVIASSRSRSSSISSSDEAVVRE ELQPWPVTTGGGVQSSAAENTELQHNAQPSIDPGSVGPAAAGPAPSQLLS ALALSFSSAMSSRGGATAPEGSMSAAAAAAATAGVSTTAATRLGRVIKKP VRLEHEKPGRQTLAGRNGRADAPAKVAARVAAAAAAAAAAAGAVAATSAT NTATGESAAGLSCVNGKADSQARDVNITGGETTATGKGAKRCVARLGTAA GSEGVVDQGDQSVLLSAGNSSVAMSDASGTASDASSSPAASSVVRMALPA DVRTAGAPLRGRDADETGGDGGGDSSRRSRDSVRERDRMVLPDPPPKRPV GELGPLPEDAIKEYKRAFDDVVWPGLAQEFGWKRVRGPRPSDVYYLPPGV VRGQNGSKCRVDYFDSNRQVLIHMAEREEKFGDLLERAWAEAIAKPRLLG RKGGGGGGSKRRRRWTELPRRKATMMKKEYPKKVSLVGTAHQVDPLNLPV PVSSEDYVPPEDVLFEQVWDPSVVVPSPKGKGAPRELAELVKEFAGVVSH DKCLEIVHRFEGDYGEARKLLRNLSRSWKSRYLVASNSTRETASAKAIVA RETAARLAAAPPPSSSWSSSSTKGGNPDVARGSGGGCPIVAGSTTVTANT TRSAVAWGGGAAAVAARGTGGGVVGGSNGGASRGGRGHVGRAGALGMQDA FWCRPLKSLAGGEAALKRQVQGGVSSIPPGARSKDKLSPDLNLARPWLPH EAAMYTRAMLEEGSKNFYAAQQKALPGRQVCELVDRYYGGWKQTDGYRAL KESIRLSKKQSACGGCHAGGDLICCDGCEAVYHPECVGLSVVPEGDWFCP ACVIRRKKEAERPLGQAPSSSSSSSSWAAGGSSARLAGAASGRARVDSAV AATKRENTAGRSKRYSTMTATVTAASVAYVASSKKARTLAKDKGAEGGGG SSGGGRGGVGGRDIGVGTETSRAIAGGVGPPPPPPMRMERVPIQLGIARG AVGGAARVAELVSSGAGGAVATVSASVCPPGTATSAACGRSEAAFGKRPI ASETPMHTQHPGKRPARLVKTAAAASVRSAEESPPVEVAPLTIAPRPPSS AGGTTAGAAGAQLGQVAAFKATNGATAGKTSAAAGDWGCLGCKHRNRAED TRCRRCEGLRLVGAEINLKGVPRQSEAPPAAAPLAGKAPATDAAPITAAE PTGGAKPPPPASSAESAASSNASAVADTQASAEPRDAAVALAASDCSTRA SLAYTAAPAPLASSDPWAPAPAPAARSSQWGCRVCSTFNKHTAAVCVSCG TREEVKVKSTDEGKAAEWWNGRKCSRNNNLQHDGTTRKVCSAVGGDDELQ VEVGLEVGGEVEGEEEEEEEDEEISVGLDEEISIGEDQQGLAPPLSGMAS TFVQL* back to topmRNA from alignment at Ecto-sp13_S_contig718:9643..21897+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp13_S_contig718.18296.1 ID=mRNA_Ecto-sp13_S_contig718.18296.1|Name=mRNA_Ecto-sp13_S_contig718.18296.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=12255bp|location=Sequence derived from alignment at Ecto-sp13_S_contig718:9643..21897+ (Ectocarpus species13 EcNAP12_S_4_19m) GAACGCTGCCGCCTGGTCTCTTTCGTTTACGGAAGAGCTGAAGAAGTCCC
CCGCATCGGCGAACGAGGAAGGGTTCAACGTAAGTTTGACGCCTTTCCGC
GGACGATTCCTCGGTGTGTCGGCCGTTACGCGGACGGTCTATTATCCAAG
CGTGTCACATCAGCTTTCTCTCTGTTAGTATGCAACACAGGTCATTTCGT
CTGCTGCCGCTGCTGCCGGCCAAGGCCTGGACGTTCCTCCCGTTTTCCGC
ACCGCTACAGGGCGCGGAGGACGATCCTGGTAGCAGACTTGGGTTACGGT
GGCAGGGTTGATCAACATGTCGGAGACGACCGCCGCTGCTGTTGTACACG
ACCGGGGTAGCCGGCCGAACAGAGAAAGACGATAGATGTGAAGAAGTGCC
ATCACACCGCACCGGCAAGGAGCCGGCGTCCAACTACAAGTCTACAGTAG
TTTGTGCTTTTTTGGACAATCCCACGGAGGATTAACTTGTACGGACGACC
CACCAGCAAGTACACAACAGCAGTATAGTCCCATCATGTCGCTCGGCATG
GCCCGTTGAAAACTTGACATCATCAGTCTCCTCGGTTTGTCCGGCATCCG
AACAGGGCGATTACCATACACACCGGCGGAGAGAGCTGTGTGGAGAAACG
CAAGCGCCTTCTGTGCGTTCCTCCAGAAGGTCGACGAAGTGCATCAGCCA
GATGGCCGCGTCTGCTCACAGCAAGGATGAAACGCAGTTCTGGAAGCTCG
TGTGGCCTCCGCTCAAGGACGGTGGTTGGCGCTACGAATTACAGACACCA
CCGGTAGCAGCGGATGCCGGCAGCGACCAGTCGGACGAAGCTAGCCCATC
GGCGCAAACCTGCCACAGCAGTCGCCGGACCAGCCCCAGAACTCGCAATA
GGATGACCTGGAGTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGT
TCCACAGGTAGCAGCAGCAGTTCACCCCGCCGGAGAAACCCGTCAGCGGC
AGCGGCGGCGGCATCAACAGGAACAACAGCAGGATCCTCCCAAATGCCAG
GAAAAGTTACGGTCTTCTTTCCGCCCCCGGTCGGAGAGGCGAGTGAGGCG
TTAGAGGAAGCTATGAGACGCGCGGCTCCTGCGGATGGCTCTCGCGACGA
AGAACGGCCTGATCACCTCGTCGGGGTGACCTCCGTGATAGAGCTCCTCC
AGCAGGTGGCTGGCTACCCCGGTCCGACCACAAGCTTGGGCATCATCAAC
TTCGATGCCGTCGCCGCCGCCGCCCGCGGCGTGTTGGTTCGAACGCCATC
GCCTTCGAAATCGGGCTCCGGCCGCAGAGAGGCCGCGGCACGGGGAGTGG
CGGCGGGAGCATATGCTGATGAGGTAGGTTGCATCCACGCCACAATACAG
CAAGCCCGCGGCTTGTATTGGTCTATGTATGAGATGTAGGTGAATCTACA
TACTCCATAGTAAAAGCACGTCAAAGGGCTACATTCATTCATTGAGAGCT
TGTTCCTACGCCAAGAGGTGGAGGATACCCCATGACCGGCACGTCGCGCG
CTGAAAGCAGTAGTCTATTGTGGATGTGCCTGAGTGGTGGCGAGCGGTGT
GTACAATGCATGTAACTCAAGCACTGTTTCGCTGGTGACTGGCTGATCTT
ACAGCAGTACGTGCATCTGGTGATGCAAAGACTCGCGTACGCGAGTGCTG
CTGAACGCACCCCCCAAGCACGATTTGTATGTTTATCGAGGGGTATGCTG
CTGTACTCAACCTCCGGCCACCCTCAACATCATCCTCTCTCTAAAGTCGT
TCTCTGCGCTAGCAGCGACAGTTTTTTGCAGCAATACGTGGCACGGGTGG
GGCTACAGTAGAGCAGTAGTCCAAGAGACTACGTACTGTGCCTAGAGACT
GCCTTCCGAGAACGGCACGTCTAGTTTTACGTCACTAACCCTTACCCAAG
TACAATAGGGTGCCGCCTGGGGAAAATGGCTGCTGTACGATTCAGCGTGC
AGTATTCGTCGGAACATTCCTCACCCCTGCCGGATGAAATCCCCTCAGAC
GCCTGCACGAGTCTATTCTCGCATCTCTCTGCGTCCCCGCACAACATCGG
TCTAGAGTGAAATGCTATCGCGTAGAATCGGTGTTTACTTGAAATGTTCT
GATGAGATACTTCTGTTCATTGTCTCGTGTGATCGACACAAAACAGCACG
TGTCCGCCACACGCGACAGTACTCCTGCTTGGCACTTACAAGTACTGCCA
AGATGCCACCCGAAACGTAGATCGTCCTAGTACATGGCTCATGGCTGGAG
GGAAGAGAACGTCTCGCCGCCCACCTCCTGATGTCCCACGATGGGAACCT
CCGTTTGGATTTTGTGCCTAATCGCTCTGCATGACTCTGCTGTGTGACCG
GTTATGCCTGCCTGCAGGGCAACACGCCAGTGATAGCATCTTCGCGAAGC
AGGAGCAGCAGTATCAGTAGTTCAGACGAGGCCGTTGTCAGGGAGGAGTT
GCAACCATGGCCGGTGACGACCGGCGGGGGGGTGCAAAGCTCCGCCGCCG
AAAATACCGAACTCCAGCACAACGCCCAGCCCTCGATTGATCCTGGGTCG
GTTGGACCTGCTGCCGCAGGCCCCGCACCCTCGCAGCTGTTGTCGGCATT
GGCTCTGTCCTTTTCCTCCGCGATGAGTAGCAGAGGGGGCGCCACTGCTC
CGGAAGGAAGCATGTCCGCCGCGGCGGCCGCCGCCGCTACCGCAGGTGTG
TCAACCACCGCCGCAACAAGGCTGGGTCGTGTGATCAAGAAGCCCGTGAG
GCTTGAGCACGAAAAACCCGGAAGACAGACCCTGGCCGGTAGGAACGGAC
GCGCTGACGCGCCGGCGAAGGTAGCAGCCCGGGTCGCTGCCGCCGCTGCT
GCCGCCGCTGCCGCCGCTGGTGCTGTTGCCGCTACGAGTGCCACCAACAC
TGCCACCGGAGAATCAGCTGCAGGGTTGTCGTGTGTGAACGGCAAGGCTG
ACAGCCAAGCTCGTGATGTTAACATTACCGGGGGGGAAACGACGGCGACG
GGGAAAGGGGCGAAGCGTTGCGTGGCGCGCCTCGGCACGGCGGCGGGCAG
CGAAGGCGTTGTCGATCAAGGAGACCAGAGCGTTCTGCTGTCGGCTGGAA
ATAGTAGCGTCGCGATGAGTGATGCCTCGGGTACCGCGAGCGATGCGTCG
TCGTCTCCTGCAGCAAGCTCCGTCGTCAGGATGGCGCTGCCGGCAGACGT
GCGCACGGCAGGAGCGCCACTGAGGGGAAGGGACGCCGACGAGACCGGTG
GCGACGGGGGCGGAGATTCCTCGAGGAGATCGCGAGATTCGGTCAGGGAA
CGCGATCGTATGGTATTGCCGGACCCTCCGCCGAAAAGACCTGTTGGAGA
GCTCGGCCCGTTGCCCGAAGACGCCATCAAGGAGTACAAGCGCGCCTTTG
ATGACGTGAGAAAGCGGTTCAGCCAACATGTCACCAGAATGCTACTTAGG
AGATACCTGCTTGGAATGTGAACACAACAGCTACGAACACGAAACAGAAA
TAGTGGGCCTCTCGTCACCGCGCTAGGCACATCTCTGTTAAACATCTCAG
GCGGCCGAGAGGCAAAGGGGTGTACCAGGAAGTCGGAAATCCATGTCATC
ATTCTGTCGAGCGGTGCTTCGAACTTGCGCACGTGTCAAGTCACGGTACC
GCAGTCCTCTTTATCACCAACCGAAAACCAATCACACAAGTACACTGCTG
TGGTAAATTGACACAATCGATTGAACCTAGATTCCAAGAAGATAGATCGT
GCCAATTCTCAGCAGAGGAAGATAACCCCCAAAGCATCCGCAATCAAACA
CACCAAGTACGTCCACAACCCCACTGATTTGTGTCGCCGCATGAGGCGAG
TACCAGTCCTCGACCCGCCGTCTCGTCCGTGGGTGACACGACCCGAGGCG
GCCATCCCCGAGTCGACCAAAATGTGTGGTAAGAACGCGGGACCGTCATG
CGGCGTTCTGTGCGGCCCACGACCGAACGACCGGACGTGGGGTCGAGTAC
CAGCCCTTTCCGATTCCGGCGCCCGCTCGCTTGCTGTTGCTGGTGCCCTA
TTCTCCGCCTACAATCACACATCAACCGCACACTTGTGAATGAATGTGGC
CTTTGTTTACTCGTTTTGTGTTTTTTTGTGCCCGTAAGGTGCAGCTAGCT
ATCGTCCACGAGAAGCGCATAAGTCATCGCCGGTCAACTCCCAATAACCA
GCTAGAAGCCGTCTGTTCGTTCGGTTGCCTGGTGTACAGGTCGTTTGGCC
CGGGCTTGCGCAGGAATTCGGTTGGAAGAGAGTACGTGGTCCCCGTCCAA
GTGACGTGTACTACCTCCCGCCAGGGGTCGTTCGGGGACAGAACGGCTCG
AAGTGCCGCGTGGACTACTTCGACAGCAACAGACAGGTTGGGTTCGGTCG
GCACCGGCTGTTGTTTTGCTAGTCGGTCGTGGGGTTTGAACAAAATCGGA
TACGAGGTGGTTGTGGGCTTCGGTGCTCCTGTGCTCTAACTCGAAGCGAG
CAGGGTCTGCGTGGGACTAAACTGTGCATGGTCGTAACGATCAAGATTGT
GCGTCGAACTTTTTTTGACAGGCGAAGAGATTTTGATCAGAGCATCCTAT
GTTCATGAGTCTATCCCCTTGTGATACGGCCGCATCGGGGGTGCAAGGAT
GTTCAGAAGCTGCTTCTTGTGTTTGTTTTAGATGTCTTCTGTGTTCTTCG
ATTCGTGGTTTCTTGTTTCGCAGGTTTTGATCCACATGGCGGAGCGCGAA
GAAAAGTTCGGTGACCTTCTGGAGAGGGCTTGGGCGGAAGCAATCGCAAA
GCCAAGGTTGCTCGGGAGAAAAGGCGGGGGTGGCGGAGGTTCGAAACGAA
GGAGGCGCTGGACGGAGCTGCCAAGGGTGAGTCGCGTAGAGATGGTAAGG
TTTGTCTGAGATAAACGTTAGTCTTATCTACCGGGGAGTATAGCTCTGGA
CGTCTTTTGTTCCAGTCCACGTGCTCGCCCTATACTGTTCCCGCGGGCGG
TGATGACAGAACAGTGAAACCGAGGTAACCAACATGAACCCTGTCCTCGG
TGGTCTCTTCAGGCGGAAGGCACCTCAACGTCGCTTCTATATCGCTATTC
CTCTTCCTTTCTCCCGCCTCCTTCTCATATGCACACCGCACCGCTTCTTT
CCTATCACGGTCTGCACTCGCTTGCCTTTGCTGGGCATGCTATCCGCAAC
CAACAGCGGAAAGCAACGATGATGAAGAAGGAGTATCCTAAGAAGGTTTC
TTTGGTGGGAACAGCGCATCAGGTGCGGGGAAGACAAGAGGGAATGGAGT
AGCGCGAGAGGGCATGAAGCAAGGTTGGGAGGAGATGGCGGTCGTCTTGG
AGATTGTTTTTTTTCACTCACGAACATAGCTGTATAGTCTGTGGTTCATG
CCCAATATCTCGCGTCGAGGCTGTCGTTTTTGCGCAAAGTGGCAATATTT
ATTCTGAGGCGTTCCCCGCCGGCATCCAGCAGCAACTCGCATGTCAGGCT
ACGCTAAACCTGAAACCAGGGGAATACGCAACAATTCTGCAGACCTCGAT
AAGACAGGAAGTGTCCCCAATAGTTTAGAGGGGAGTTTACACAGACGAAT
CCAGAACTTCCTCAACACAGGACCGCTTCCTTACAACAGGAGGTCACACT
CGAACTTGGCAGCACGTTTCAAGTGTATCTTGTGTGCTCGACCACAGGTG
GATCCTTTGAACTTGCCCGTTCCTGTGTCGAGCGAGGACTACGTGCCTCC
AGAGGACGTGCTGTTCGAGCAGGTGTGGGACCCGAGCGTCGTGGTTCCCT
CTCCGAAAGGCAAGGGCGCCCCTCGGGAGCTTGCCGAGCTCGTGAAAGAA
TTTGCCGGCGTGGTGAGCCACGACAAGGTGCGTGAAACAGTGGGGTGTTT
CAACAGAGGGAGAGGGGACGTGTGCTGTGGTACACGATGTATCAGTGGTC
TGCACGGTTGCGATTCAGCCCGTGGGGGTGGAGTAATTACCTCTCTTCCG
GCACGGGGCAACGAGGGTAATTCTGTCCGGAACCGTCGCTAGTGGCGCCT
TGCCGGCCGTGGTGGTAGTATGAAGAAGGAAGCTCTATTTCACGTATAAG
TTCAGCCTTGCTCTCCAGAGTGGATGTCCGTCAAGTGTTCTCTTCCCAAA
AGAGCCATCTCGTGCAGCAGGGTACCGCTGTCCCCCCCTCCCGTTCTACG
GGCAGTTCAAACCTCTACGTTGCAACCCGCTCAAGCGTGGTTCGTTCCTT
CTTAGTGTTGCTCGACATGACAGCCACAACAATGACAATCCCCTTTGTTC
TCGTCTCAATCATTCGTGTACCAGTGTCTGGAGATCGTTCATCGCTTCGA
AGGCGACTACGGCGAGGCTCGCAAGCTGCTGAGAAACCTCTCGCGGTCGT
GGAAGTCCCGTTACCTGGTGGCCTCGAATTCGACGAGGGAGACGGCGTCA
GCAAAGGCCATCGTGGCCAGAGAAACCGCCGCGCGCCTTGCAGCTGCACC
GCCGCCGTCTTCATCGTGGTCTTCGTCATCAACCAAAGGTGGCAACCCCG
ACGTCGCTCGTGGTAGTGGTGGTGGTTGTCCGATTGTGGCGGGTTCGACG
ACGGTCACTGCTAACACAACAAGAAGCGCGGTGGCTTGGGGAGGGGGTGC
GGCGGCGGTGGCTGCCCGAGGTACCGGTGGGGGCGTTGTCGGTGGCAGCA
ACGGCGGCGCCAGCCGTGGCGGTCGAGGTCACGTTGGCCGTGCAGGCGCC
CTGGGGATGCAGGACGCGTTCTGGTGTCGTCCGCTGAAATCCCTCGCAGG
AGGCGAGGCCGCGTTGAAGCGGCAGGTGCAAGGAGGCGTGTCCAGCATCC
CGCCGGGGGCCAGGAGCAAGGACAAGCTGTCGCCAGACTTGAACTTGGCG
CGGCCGTGGCTCCCCCACGAGGCGGCCATGTACACGAGGGCAATGCTCGA
GGAGGGGTCAAAGAATTTCTACGCCGCGCAGGTAGGACGAAAACTGTTCA
TAGCACTCATTGGGGAACATGAGGCGGAGACGCTTTTCGTGCATTCCCTG
GACAAATGAGAAGGCGTCTTTGCAAATACCGGTCTTGCATTTCCGGCGAA
GCGTCTTTGCAAGTGCACGGAAACTACAGTAGCGCAACACACGCACCACG
AAACTAGTGCACTAGCCAGCACTTGGCCAAGAACGGCGAGCATGAACCTG
TTCCGCACTTGACCGTAAAATGCCGGACCCTACGCAGGAGCTCCGGCCGC
TGTCCTCTTACCTCCTGTATCCACCACCCTCTCCGCTGTCTGTAGTGTTG
AGGTAGACATTATTGTCCGATACCACAGATGGCATCTTCTGAGCTTGCGT
TTGTGTCACCTATCGAAGTCATCACCGGCGCCTTACCCACCTACGCTCCG
AAACCTTGCTCCGCTGTCTCCCTGGTGCGAACCCTGTCTGGTGTCCATCT
TCTTTCTTGCGCAATGTCGAGCAGAAAGCGCTACCGGGTAGGCAGGTGTG
CGAGCTGGTGGACCGATACTACGGGGGTTGGAAGCAAACGGACGGGTATA
GGGCCCTCAAGGAATCCATCCGGTATGTGTGTTTCGTGTGTGCTTAAGAA
GTGTACTATTTTTGCCACAAAAAAAGGAAGGAACGTATTATATCGATCGA
GAAGTCTCATTTGGCGCATTATATGCATAGCATAGTCATGCTCGAGGACG
ATCGCACCGGTTACTTCTTGGTTTTTTGTCTCTGCACCCCGGTGTAGAAC
CCCGACGGGTGCGAAAACCCCGATATTGGTTCGGAAATACAAGTTTATCA
ACGCGTCCTAGTTTTTCAAAGGCACCCCCGGTGCGATAGCTCCGATGAGC
GATTGGTATGAGCGATTGGTAGGAGCGATGCGTATGAAATACGCTGGCCT
TGATGTACTGGTGCCATGCTGTCGTTTGCAGGCACCCCGGTGCGACGATC
GCGATAATGCGATATTGAAAAACACCACAGCGGCGTGGGTTGCCTGCAGA
TAGGTGGCCAGTGATGGGGTAGAATACGAGCTTGGTCATGGCTGGTGGCA
AGGGCGAAAAACGATGTGGTTTCCTGCTAGGCGTGTGTGGTGTAGGTTGT
GTCTTCCAGCTTGTTGACACGCGTCTTTCTCTTTGTCGTTGTTGGCCTTC
TCACCGAATACTGCTTTAGTGCCGCATAAGTTACTTCTTCAATAGCTGGG
TGGTAGATTGCCGGACGTCCTGCACCTTCTGTCGTGTTTGTGTGTGCTCG
TCAACACCGGGAGGTATTGACGTTCCGTAATCATGCGTGTCAAGGTACTT
CGGCTAACCCCATCAGAATTGGCAGAATGATCATGGGGTATTCACACACA
CCCTACCATTGTACGCGTGGGGTTCGCATCTTGGAAACGCCTCGCGTTTT
TGGTACACCTCCGTCCCAAGACAGGTGAACTGTCGTGATGCGTAGTTTGT
CGCGTCTTGTCTCCTCAGCGTAGTGCTTGCTGCACTTCTTACATCTATCG
GTGGTTTCATCCCAGAATAGAATAGCATAATAGACATCATTCTCTGCGTT
TGCCTGCCCGCTCTACTCTAGTCTCCCTAACTCTGCCCCATCGTGTCATG
TTTGCCTCTACGTTTGCCGTACCGACCCCTCAACACTTGCCAACCGCGGA
ACACGCAGCCTGTCAAAGAAACAATCGGTGAGAGCGGCAACAGCAGTTGC
CACATCTCGCGTCAATTCGGGAGAAACGAAACAGGATGTTGAACGTGTTT
CAGACGAGTGGCATGGAGAGTCAACACACGTAGTCTACAGGCGAAGTCCA
TGGTCTATCGCAGGCAGTGGTACAGGAGGAAACGTGGGCTCTGGCCGGAA
ACCAGGGAAAAATGGAGTTGTTGTTTTTTCATGGCTCGCCATGCACCGGT
CTTCTCTCAACACCAGGAATGCCTTGCGAGAGAGTGGGTGTGCTTCGGGG
GCACGCGCCGCTTTGACCGGTCGCACGTATTTCAACTCTCGTTGTCCGTC
TTTCTCTGTGCGTTCGATGCTGTCAGGCCTGTGGAGGGTGCCACGCGGGA
GGAGACCTCATCTGCTGCGATGGTTGTGAGGCCGTGTATCACCCGGAGTG
CGTGGGGCTATCTGTCGTCCCGGAGGGCGACTGGTTCTGCCCGGCGTGCG
TCATTCGCAGGAAAAAGGAGGCCGAAAGGCCATTAGGACAGGCCCCGTCC
TCCTCCTCGTCCTCCTCCTCTTGGGCCGCAGGGGGGAGTTCTGCTCGTCT
TGCCGGCGCTGCGTCGGGCCGGGCGCGGGTGGATTCCGCGGTGGCGGCCA
CCAAGCGTGAGAACACCGCCGGTAGGAGCAAGAGGTATAGCACGATGACC
GCCACTGTGACTGCCGCCTCCGTGGCGTACGTTGCATCATCCAAGAAGGC
CCGCACGCTTGCGAAGGACAAGGGGGCTGAAGGCGGGGGTGGAAGCAGCG
GTGGTGGCCGGGGCGGGGTAGGGGGCAGAGATATCGGCGTGGGGACTGAA
ACCAGCCGTGCAATTGCCGGTGGGGTCGGGCCGCCGCCACCACCGCCCAT
GCGAATGGAGAGGGTCCCGATCCAGTTGGGAATTGCGCGAGGTGCTGTTG
GCGGCGCGGCTAGAGTGGCTGAACTAGTCTCCTCGGGCGCGGGCGGTGCT
GTTGCGACAGTATCGGCGTCGGTGTGTCCACCGGGGACCGCGACCTCGGC
CGCCTGTGGGAGAAGTGAAGCGGCTTTCGGGAAGCGCCCAATCGCTAGCG
AGACTCCAATGCATACACAACACCCCGGCAAACGCCCTGCCAGATTGGTC
AAGACCGCTGCTGCTGCATCTGTAAGGAGCGCCGAGGAGTCTCCTCCTGT
AGAGGTGGCGCCTCTGACGATTGCGCCACGGCCGCCCTCTTCTGCAGGCG
GAACGACCGCTGGCGCTGCCGGTGCCCAGCTAGGGCAAGTAGCGGCGTTC
AAAGCGACGAATGGTGCTACCGCGGGGAAAACTTCGGCGGCAGCAGGCGA
TTGGGGGTGCCTCGGCTGCAAGCACCGCAACCGAGCCGAGGACACACGGT
GTCGTCGGTGCGAGGGGCTCAGGTTGGTCGGAGCGGAAATTAATTTGAAA
GGGGTTCCGCGCCAGTCTGAGGCTCCTCCGGCTGCGGCTCCCCTCGCGGG
CAAGGCTCCTGCGACTGATGCTGCCCCCATTACCGCCGCTGAGCCCACCG
GTGGCGCGAAGCCGCCGCCTCCCGCGTCGAGCGCTGAGTCCGCTGCTTCG
AGCAACGCCTCTGCCGTCGCCGACACCCAGGCAAGTGCTGAACCCCGGGA
TGCCGCCGTGGCTCTAGCTGCCTCCGACTGTTCCACCCGCGCTTCTCTGG
CCTACACAGCCGCACCCGCTCCTCTTGCTTCGAGTGACCCGTGGGCGCCG
GCGCCGGCGCCTGCGGCGCGATCGTCCCAATGGGGCTGCCGCGTATGCTC
CACGTTCAATAAGCACACCGCGGCCGTTTGCGTGAGCTGTGGCACGCGCG
AGGAAGTCAAGGTCAAGTCTACAGACGAGGGGAAGGCGGCCGAGTGGTGG
AACGGTCGAAAGTGCTCCCGCAACAACAACCTACAACACGACGGCACTAC
ACGCAAGGTCTGCTCGGCTGTTGGGGGCGATGACGAGCTGCAGGTAGAGG
TGGGATTGGAGGTGGGGGGAGAAGTGGAGGGAGAGGAAGAGGAGGAGGAG
GAGGACGAGGAGATATCTGTGGGCTTGGACGAAGAAATCTCGATCGGGGA
GGATCAGCAGGGTCTAGCCCCCCCTCTCTCCGGGATGGCCTCAACATTTG
TGCAGCTCTAAAGTACACAGAGAGAGCTGTTTTGGTATATGACAGCAGCA
GCCTCGCAGCAGCACCCACCGCCGTCGCTGCTTGCAAAATTTACACTTTT
TTTTGTTGGAGACACCGCTGACTTGACTATCGAAGAAGCAGAGGCGACGA
CACCGGTGGCAGCATGTACACGATCGAGGTGAATGAACATATAGCATTCA
TTTGTTGTTGTATCGGGACGGAGAGAACGCGGAACGTGTGCGACGTAGCA
GCGATCGTGCAGGTTCCCGCTTGCTCCGACTGTTTTTAAAGGAGCGTGTG
TCACTAGGCCACAAGCATGTGCGTTGTGCCATACGGAACATTATGTGGTT
CGGTTTTCGGGGTGTTGGTCGCCTATGACGTTCCTGCTTACGTACAAGCA
GTAGTTGGCGCCGCCCCCGCTTGGTTGTGATTTTACTGGTCGCCGGTTTC
GACCGCCGTCGACCGCCGTCGAGTGTTTGTAGATGAGGGCGGCATGTTGT
GCGTGGCCGTTATGAGTGGGTGTGAAAAGGATGATGGTGTTTTTTTATGT
ACTCCGGGGGATGGATATGTTTTGGCGAATTGACCACGACGGGTCTCGAG
CTTTCCGCACAAAAAATGGGAGACTTGATATTTTTGTGAGGGAAACTCGG
GTTCGCCCGTGTCTACTACTTATTATACTAAATTTCGGAATAGGCGGCGT
AAGGGTTTGTGTCATGGATGCGGTGCTGGGCGCAGTCGCGTGTCGTTGGT
GTTCGTTGTTCGTGTCGACGGTGGGTCTGATGTAAACCAGAAAAGCGCAT
GTAATGTGTCGTGCATCCGTTCGTGATCCGGTAGGCTGGTGCTGCGACTG
TGTATTCTAGAACGTTGGGCAAATAATAAGCAGAGTGAGGTTGTTGAGTG
TGTGTTTGCGCTCTGCCTGCTGTCTGATGAGTGTTGTGTGTTGCCAAGGG
ACGAAAGGATAAGCCGCTTTGTTAACCTTCACCACGTGCGATGTTCGAGT
TGAATTAATACCACATGCATCGCCGTACCTGCGACTGAATGTTGGTGAGC
AATCTCGTGCAGGGTTTTTTACCAAAACGTAGGTCGACACGATGAGTTTG
ATTGGCGTCGCTTTTTGTGTGGGTAGAAATGCCGCCCGATGTTAGTATGA
AGTACATATACTTGATTTGTCTCCCGATGTCATATCAAGTACATGTACTT
GCACGTGCCTTGACTACAGAGTCGTAAGGTTCGACATGTGAGGAAATACG
AGCAACACAGCGTATCTTTGTTGTCCTCGAGTCAGCCGCTCTCACACTGG
TCCCATTTGCTGGCGGTCCTAACTAGGGTCAAAAGCACGAAAGAGTGTGT
CGCCACGAAATTTCGAACCTTCTTGCCAAAGAGTGCAGTCTTCACTCGTA
GCTGC back to topCoding sequence (CDS) from alignment at Ecto-sp13_S_contig718:9643..21897+ >mRNA_Ecto-sp13_S_contig718.18296.1 ID=mRNA_Ecto-sp13_S_contig718.18296.1|Name=mRNA_Ecto-sp13_S_contig718.18296.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=4818bp|location=Sequence derived from alignment at Ecto-sp13_S_contig718:9643..21897+ (Ectocarpus species13 EcNAP12_S_4_19m) ATGGCCGCGTCTGCTCACAGCAAGGATGAAACGCAGTTCTGGAAGCTCGT GTGGCCTCCGCTCAAGGACGGTGGTTGGCGCTACGAATTACAGACACCAC CGGTAGCAGCGGATGCCGGCAGCGACCAGTCGGACGAAGCTAGCCCATCG GCGCAAACCTGCCACAGCAGTCGCCGGACCAGCCCCAGAACTCGCAATAG GATGACCTGGAGTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTT CCACAGGTAGCAGCAGCAGTTCACCCCGCCGGAGAAACCCGTCAGCGGCA GCGGCGGCGGCATCAACAGGAACAACAGCAGGATCCTCCCAAATGCCAGG AAAAGTTACGGTCTTCTTTCCGCCCCCGGTCGGAGAGGCGAGTGAGGCGT TAGAGGAAGCTATGAGACGCGCGGCTCCTGCGGATGGCTCTCGCGACGAA GAACGGCCTGATCACCTCGTCGGGGTGACCTCCGTGATAGAGCTCCTCCA GCAGGTGGCTGGCTACCCCGGTCCGACCACAAGCTTGGGCATCATCAACT TCGATGCCGTCGCCGCCGCCGCCCGCGGCGTGTTGGTTCGAACGCCATCG CCTTCGAAATCGGGCTCCGGCCGCAGAGAGGCCGCGGCACGGGGAGTGGC GGCGGGAGCATATGCTGATGAGGGCAACACGCCAGTGATAGCATCTTCGC GAAGCAGGAGCAGCAGTATCAGTAGTTCAGACGAGGCCGTTGTCAGGGAG GAGTTGCAACCATGGCCGGTGACGACCGGCGGGGGGGTGCAAAGCTCCGC CGCCGAAAATACCGAACTCCAGCACAACGCCCAGCCCTCGATTGATCCTG GGTCGGTTGGACCTGCTGCCGCAGGCCCCGCACCCTCGCAGCTGTTGTCG GCATTGGCTCTGTCCTTTTCCTCCGCGATGAGTAGCAGAGGGGGCGCCAC TGCTCCGGAAGGAAGCATGTCCGCCGCGGCGGCCGCCGCCGCTACCGCAG GTGTGTCAACCACCGCCGCAACAAGGCTGGGTCGTGTGATCAAGAAGCCC GTGAGGCTTGAGCACGAAAAACCCGGAAGACAGACCCTGGCCGGTAGGAA CGGACGCGCTGACGCGCCGGCGAAGGTAGCAGCCCGGGTCGCTGCCGCCG CTGCTGCCGCCGCTGCCGCCGCTGGTGCTGTTGCCGCTACGAGTGCCACC AACACTGCCACCGGAGAATCAGCTGCAGGGTTGTCGTGTGTGAACGGCAA GGCTGACAGCCAAGCTCGTGATGTTAACATTACCGGGGGGGAAACGACGG CGACGGGGAAAGGGGCGAAGCGTTGCGTGGCGCGCCTCGGCACGGCGGCG GGCAGCGAAGGCGTTGTCGATCAAGGAGACCAGAGCGTTCTGCTGTCGGC TGGAAATAGTAGCGTCGCGATGAGTGATGCCTCGGGTACCGCGAGCGATG CGTCGTCGTCTCCTGCAGCAAGCTCCGTCGTCAGGATGGCGCTGCCGGCA GACGTGCGCACGGCAGGAGCGCCACTGAGGGGAAGGGACGCCGACGAGAC CGGTGGCGACGGGGGCGGAGATTCCTCGAGGAGATCGCGAGATTCGGTCA GGGAACGCGATCGTATGGTATTGCCGGACCCTCCGCCGAAAAGACCTGTT GGAGAGCTCGGCCCGTTGCCCGAAGACGCCATCAAGGAGTACAAGCGCGC CTTTGATGACGTCGTTTGGCCCGGGCTTGCGCAGGAATTCGGTTGGAAGA GAGTACGTGGTCCCCGTCCAAGTGACGTGTACTACCTCCCGCCAGGGGTC GTTCGGGGACAGAACGGCTCGAAGTGCCGCGTGGACTACTTCGACAGCAA CAGACAGGTTTTGATCCACATGGCGGAGCGCGAAGAAAAGTTCGGTGACC TTCTGGAGAGGGCTTGGGCGGAAGCAATCGCAAAGCCAAGGTTGCTCGGG AGAAAAGGCGGGGGTGGCGGAGGTTCGAAACGAAGGAGGCGCTGGACGGA GCTGCCAAGGCGGAAAGCAACGATGATGAAGAAGGAGTATCCTAAGAAGG TTTCTTTGGTGGGAACAGCGCATCAGGTGGATCCTTTGAACTTGCCCGTT CCTGTGTCGAGCGAGGACTACGTGCCTCCAGAGGACGTGCTGTTCGAGCA GGTGTGGGACCCGAGCGTCGTGGTTCCCTCTCCGAAAGGCAAGGGCGCCC CTCGGGAGCTTGCCGAGCTCGTGAAAGAATTTGCCGGCGTGGTGAGCCAC GACAAGTGTCTGGAGATCGTTCATCGCTTCGAAGGCGACTACGGCGAGGC TCGCAAGCTGCTGAGAAACCTCTCGCGGTCGTGGAAGTCCCGTTACCTGG TGGCCTCGAATTCGACGAGGGAGACGGCGTCAGCAAAGGCCATCGTGGCC AGAGAAACCGCCGCGCGCCTTGCAGCTGCACCGCCGCCGTCTTCATCGTG GTCTTCGTCATCAACCAAAGGTGGCAACCCCGACGTCGCTCGTGGTAGTG GTGGTGGTTGTCCGATTGTGGCGGGTTCGACGACGGTCACTGCTAACACA ACAAGAAGCGCGGTGGCTTGGGGAGGGGGTGCGGCGGCGGTGGCTGCCCG AGGTACCGGTGGGGGCGTTGTCGGTGGCAGCAACGGCGGCGCCAGCCGTG GCGGTCGAGGTCACGTTGGCCGTGCAGGCGCCCTGGGGATGCAGGACGCG TTCTGGTGTCGTCCGCTGAAATCCCTCGCAGGAGGCGAGGCCGCGTTGAA GCGGCAGGTGCAAGGAGGCGTGTCCAGCATCCCGCCGGGGGCCAGGAGCA AGGACAAGCTGTCGCCAGACTTGAACTTGGCGCGGCCGTGGCTCCCCCAC GAGGCGGCCATGTACACGAGGGCAATGCTCGAGGAGGGGTCAAAGAATTT CTACGCCGCGCAGCAGAAAGCGCTACCGGGTAGGCAGGTGTGCGAGCTGG TGGACCGATACTACGGGGGTTGGAAGCAAACGGACGGGTATAGGGCCCTC AAGGAATCCATCCGCCTGTCAAAGAAACAATCGGCCTGTGGAGGGTGCCA CGCGGGAGGAGACCTCATCTGCTGCGATGGTTGTGAGGCCGTGTATCACC CGGAGTGCGTGGGGCTATCTGTCGTCCCGGAGGGCGACTGGTTCTGCCCG GCGTGCGTCATTCGCAGGAAAAAGGAGGCCGAAAGGCCATTAGGACAGGC CCCGTCCTCCTCCTCGTCCTCCTCCTCTTGGGCCGCAGGGGGGAGTTCTG CTCGTCTTGCCGGCGCTGCGTCGGGCCGGGCGCGGGTGGATTCCGCGGTG GCGGCCACCAAGCGTGAGAACACCGCCGGTAGGAGCAAGAGGTATAGCAC GATGACCGCCACTGTGACTGCCGCCTCCGTGGCGTACGTTGCATCATCCA AGAAGGCCCGCACGCTTGCGAAGGACAAGGGGGCTGAAGGCGGGGGTGGA AGCAGCGGTGGTGGCCGGGGCGGGGTAGGGGGCAGAGATATCGGCGTGGG GACTGAAACCAGCCGTGCAATTGCCGGTGGGGTCGGGCCGCCGCCACCAC CGCCCATGCGAATGGAGAGGGTCCCGATCCAGTTGGGAATTGCGCGAGGT GCTGTTGGCGGCGCGGCTAGAGTGGCTGAACTAGTCTCCTCGGGCGCGGG CGGTGCTGTTGCGACAGTATCGGCGTCGGTGTGTCCACCGGGGACCGCGA CCTCGGCCGCCTGTGGGAGAAGTGAAGCGGCTTTCGGGAAGCGCCCAATC GCTAGCGAGACTCCAATGCATACACAACACCCCGGCAAACGCCCTGCCAG ATTGGTCAAGACCGCTGCTGCTGCATCTGTAAGGAGCGCCGAGGAGTCTC CTCCTGTAGAGGTGGCGCCTCTGACGATTGCGCCACGGCCGCCCTCTTCT GCAGGCGGAACGACCGCTGGCGCTGCCGGTGCCCAGCTAGGGCAAGTAGC GGCGTTCAAAGCGACGAATGGTGCTACCGCGGGGAAAACTTCGGCGGCAG CAGGCGATTGGGGGTGCCTCGGCTGCAAGCACCGCAACCGAGCCGAGGAC ACACGGTGTCGTCGGTGCGAGGGGCTCAGGTTGGTCGGAGCGGAAATTAA TTTGAAAGGGGTTCCGCGCCAGTCTGAGGCTCCTCCGGCTGCGGCTCCCC TCGCGGGCAAGGCTCCTGCGACTGATGCTGCCCCCATTACCGCCGCTGAG CCCACCGGTGGCGCGAAGCCGCCGCCTCCCGCGTCGAGCGCTGAGTCCGC TGCTTCGAGCAACGCCTCTGCCGTCGCCGACACCCAGGCAAGTGCTGAAC CCCGGGATGCCGCCGTGGCTCTAGCTGCCTCCGACTGTTCCACCCGCGCT TCTCTGGCCTACACAGCCGCACCCGCTCCTCTTGCTTCGAGTGACCCGTG GGCGCCGGCGCCGGCGCCTGCGGCGCGATCGTCCCAATGGGGCTGCCGCG TATGCTCCACGTTCAATAAGCACACCGCGGCCGTTTGCGTGAGCTGTGGC ACGCGCGAGGAAGTCAAGGTCAAGTCTACAGACGAGGGGAAGGCGGCCGA GTGGTGGAACGGTCGAAAGTGCTCCCGCAACAACAACCTACAACACGACG GCACTACACGCAAGGTCTGCTCGGCTGTTGGGGGCGATGACGAGCTGCAG GTAGAGGTGGGATTGGAGGTGGGGGGAGAAGTGGAGGGAGAGGAAGAGGA GGAGGAGGAGGACGAGGAGATATCTGTGGGCTTGGACGAAGAAATCTCGA TCGGGGAGGATCAGCAGGGTCTAGCCCCCCCTCTCTCCGGGATGGCCTCA ACATTTGTGCAGCTCTAA back to top
|