prot_Ecto-sp13_S_contig12158.1822.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12158.1822.1
Unique Nameprot_Ecto-sp13_S_contig12158.1822.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length92
Homology
BLAST of mRNA_Ecto-sp13_S_contig12158.1822.1 vs. uniprot
Match: D7FZL7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZL7_ECTSI)

HSP 1 Score: 185 bits (469), Expect = 9.390e-56
Identity = 89/91 (97.80%), Postives = 91/91 (100.00%), Query Frame = 0
Query:    1 MTSTELMAKDKREAMDKAVSERTEARMLDWYDKNQDKINKQCGIKETEGMFECGRCKSTKTTYTQKQTRSADEPMTTFVTCSNCKNRWKFC 91
            MTSTELMAKDKREAMDKAVSERTEARMLDWYDKN+DKINKQCGIKET+GMFECGRCKSTKTTYTQKQTRSADEPMTTFVTCSNCKNRWKFC
Sbjct:  281 MTSTELMAKDKREAMDKAVSERTEARMLDWYDKNEDKINKQCGIKETDGMFECGRCKSTKTTYTQKQTRSADEPMTTFVTCSNCKNRWKFC 371          
BLAST of mRNA_Ecto-sp13_S_contig12158.1822.1 vs. uniprot
Match: A0A836CH25_9STRA (Transcription factor S-II-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH25_9STRA)

HSP 1 Score: 123 bits (308), Expect = 6.380e-32
Identity = 57/91 (62.64%), Postives = 71/91 (78.02%), Query Frame = 0
Query:    1 MTSTELMAKDKREAMDKAVSERTEARMLDWYDKNQDKINKQCGIKETEGMFECGRCKSTKTTYTQKQTRSADEPMTTFVTCSNCKNRWKFC 91
            M+ TE+++  KR+AM+    +  +AR +DW +KNQD+INKQCGI   EGMFECGRCKS KT Y QKQTRSADEPMTTFVTC +C  +W+FC
Sbjct:  267 MSPTEMLSAAKRQAMEAQAQDLVDARRMDWAEKNQDEINKQCGITNMEGMFECGRCKSKKTHYYQKQTRSADEPMTTFVTCLHCGKKWRFC 357          
BLAST of mRNA_Ecto-sp13_S_contig12158.1822.1 vs. uniprot
Match: A0A8K1CMA4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CMA4_PYTOL)

HSP 1 Score: 109 bits (273), Expect = 4.030e-27
Identity = 53/89 (59.55%), Postives = 65/89 (73.03%), Query Frame = 0
Query:    1 MTSTELMAKDKREAMDKAVSERTEARMLDWYDKNQDKINKQCGIKETEGMFECGRCKSTKTTYTQKQTRSADEPMTTFVTCSNCKNRWK 89
            MT  EL  ++KR  + K   +  +   LDW D N+DKINKQCGI+ ++G+F CGRCKS+KT+ TQKQTRSADEPMT FV C NC NRWK
Sbjct:  222 MTPEELATEEKRNEIMKLRDDAFQRARLDWADANEDKINKQCGIENSKGLFTCGRCKSSKTSNTQKQTRSADEPMTVFVQCHNCGNRWK 310          
BLAST of mRNA_Ecto-sp13_S_contig12158.1822.1 vs. uniprot
Match: K3WZ99_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WZ99_GLOUD)

HSP 1 Score: 109 bits (273), Expect = 5.140e-27
Identity = 53/89 (59.55%), Postives = 65/89 (73.03%), Query Frame = 0
Query:    1 MTSTELMAKDKREAMDKAVSERTEARMLDWYDKNQDKINKQCGIKETEGMFECGRCKSTKTTYTQKQTRSADEPMTTFVTCSNCKNRWK 89
            M++ EL  ++KR  + K   +  +   LDW D N+DKINKQCGI+  +G+F CGRCKSTKT+ TQKQTRSADEPMT FV C NC NRWK
Sbjct:  236 MSADELATEEKRNEILKLRDDAFQRARLDWADANEDKINKQCGIENAKGLFTCGRCKSTKTSNTQKQTRSADEPMTVFVQCHNCGNRWK 324          
BLAST of mRNA_Ecto-sp13_S_contig12158.1822.1 vs. uniprot
Match: A0A5D6XF33_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XF33_9STRA)

HSP 1 Score: 108 bits (270), Expect = 1.370e-26
Identity = 52/89 (58.43%), Postives = 65/89 (73.03%), Query Frame = 0
Query:    1 MTSTELMAKDKREAMDKAVSERTEARMLDWYDKNQDKINKQCGIKETEGMFECGRCKSTKTTYTQKQTRSADEPMTTFVTCSNCKNRWK 89
            M++ EL  ++KR  + K   +  +   LDW D N+DKINKQCGI+  +G+F CGRCKS+KT+ TQKQTRSADEPMT FV C NC NRWK
Sbjct:  234 MSADELATEEKRLEVQKLRDDAFQKARLDWADANEDKINKQCGIENAKGLFTCGRCKSSKTSNTQKQTRSADEPMTVFVQCHNCGNRWK 322          
BLAST of mRNA_Ecto-sp13_S_contig12158.1822.1 vs. uniprot
Match: A0A7S0XKL3_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0XKL3_9STRA)

HSP 1 Score: 107 bits (266), Expect = 4.630e-26
Identity = 54/93 (58.06%), Postives = 66/93 (70.97%), Query Frame = 0
Query:    1 MTSTELMAKDKREAMDKAVSERTEARMLDWYDKNQDKINKQCGIKET---EGMFECGRCKSTKTTYTQKQTRSADEPMTTFVTCSNCKNRWKF 90
            MTS +L++ +KR+  ++      +A MLDW  +N+DKIN+ CGIK       +F CGRCKSTKTT TQKQTRSADEPMT FV C NC NRWKF
Sbjct:  222 MTSEQLISDEKRKEFEERKKSLMDANMLDWEAQNEDKINEMCGIKGELLQASLFTCGRCKSTKTTSTQKQTRSADEPMTVFVLCLNCNNRWKF 314          
BLAST of mRNA_Ecto-sp13_S_contig12158.1822.1 vs. uniprot
Match: A0A7R9WI09_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WI09_9STRA)

HSP 1 Score: 106 bits (265), Expect = 4.650e-26
Identity = 57/93 (61.29%), Postives = 63/93 (67.74%), Query Frame = 0
Query:    1 MTSTELMAKDKREAMDKAVSERTEARMLDWYDKNQDKINKQCGIKET---EGMFECGRCKSTKTTYTQKQTRSADEPMTTFVTCSNCKNRWKF 90
            M S EL   +K  A  K VS+  ++R LDW   N+DKINKQCGIK       +F CGRCKS KTT TQKQTRSADEPMT FV C NC NRWKF
Sbjct:  203 MRSEELATSEKAAARAKLVSDLQDSRRLDWETANEDKINKQCGIKGELLKASLFTCGRCKSIKTTSTQKQTRSADEPMTVFVLCLNCGNRWKF 295          
BLAST of mRNA_Ecto-sp13_S_contig12158.1822.1 vs. uniprot
Match: A0A3R7J9J5_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7J9J5_9STRA)

HSP 1 Score: 106 bits (264), Expect = 5.640e-26
Identity = 51/89 (57.30%), Postives = 64/89 (71.91%), Query Frame = 0
Query:    1 MTSTELMAKDKREAMDKAVSERTEARMLDWYDKNQDKINKQCGIKETEGMFECGRCKSTKTTYTQKQTRSADEPMTTFVTCSNCKNRWK 89
            MT+ EL  ++KR  ++K   +  +   LDW + N DKI KQCG + T+G+F CGRCKS+KT+ TQKQTRSADEPMT FV C NC NRWK
Sbjct:  199 MTTEELATEEKRAEIEKLRDDAFQEARLDWAEANHDKIQKQCGTEGTKGLFTCGRCKSSKTSNTQKQTRSADEPMTVFVMCHNCGNRWK 287          
BLAST of mRNA_Ecto-sp13_S_contig12158.1822.1 vs. uniprot
Match: F0W9A3_9STRA (Transcription elongation factor putative n=2 Tax=Albugo TaxID=65356 RepID=F0W9A3_9STRA)

HSP 1 Score: 106 bits (264), Expect = 8.230e-26
Identity = 53/90 (58.89%), Postives = 65/90 (72.22%), Query Frame = 0
Query:    1 MTSTELMAKDKREAMDKAVSERTEARMLDWYDKNQDKINKQCGI-KETEGMFECGRCKSTKTTYTQKQTRSADEPMTTFVTCSNCKNRWK 89
            M+  EL   +KR  ++K   +  +   LDW D N+DKINKQCGI K ++G+F CGRCKS+KT+ TQKQTRSADEPMT FV C NC NRWK
Sbjct:  219 MSPEELATDEKRHEIEKLRDDAFQRARLDWADANEDKINKQCGIEKNSKGLFTCGRCKSSKTSNTQKQTRSADEPMTVFVQCHNCGNRWK 308          
BLAST of mRNA_Ecto-sp13_S_contig12158.1822.1 vs. uniprot
Match: A0A6A5AKX6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AKX6_9STRA)

HSP 1 Score: 106 bits (264), Expect = 1.010e-25
Identity = 50/89 (56.18%), Postives = 64/89 (71.91%), Query Frame = 0
Query:    1 MTSTELMAKDKREAMDKAVSERTEARMLDWYDKNQDKINKQCGIKETEGMFECGRCKSTKTTYTQKQTRSADEPMTTFVTCSNCKNRWK 89
            M+  E+  +++R+ MD+   +  +   LDW + N DKINK CGIK+T G+F CGRCKSTKT+ TQ+QTRSADEPMT FV C NC  RWK
Sbjct:  232 MSPDEMATEERRKEMDQLRDDAFQRARLDWAEANADKINKACGIKDTRGLFTCGRCKSTKTSNTQQQTRSADEPMTVFVICHNCGKRWK 320          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12158.1822.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZL7_ECTSI9.390e-5697.80Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CH25_9STRA6.380e-3262.64Transcription factor S-II-domain-containing protei... [more]
A0A8K1CMA4_PYTOL4.030e-2759.55Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3WZ99_GLOUD5.140e-2759.55Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A5D6XF33_9STRA1.370e-2658.43Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A7S0XKL3_9STRA4.630e-2658.06Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]
A0A7R9WI09_9STRA4.650e-2661.29Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A3R7J9J5_9STRA5.640e-2657.30Uncharacterized protein n=2 Tax=Phytophthora kerno... [more]
F0W9A3_9STRA8.230e-2658.89Transcription elongation factor putative n=2 Tax=A... [more]
A0A6A5AKX6_9STRA1.010e-2556.18Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001222Zinc finger, TFIIS-typeSMARTSM00440Cys4_2coord: 51..90
e-value: 5.3E-18
score: 75.8
IPR001222Zinc finger, TFIIS-typePFAMPF01096TFIIS_Ccoord: 51..89
e-value: 5.1E-19
score: 67.8
IPR001222Zinc finger, TFIIS-typePROSITEPS51133ZF_TFIIS_2coord: 49..89
score: 13.921
NoneNo IPR availableGENE3D2.20.25.10coord: 41..91
e-value: 8.8E-23
score: 81.7
NoneNo IPR availablePANTHERPTHR11477:SF28coord: 3..91
NoneNo IPR availablePANTHERPTHR11477TRANSCRIPTION ELONGATION FACTOR S-IIcoord: 3..91
NoneNo IPR availableSUPERFAMILY57783Zinc beta-ribboncoord: 47..89

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12158contigEcto-sp13_S_contig12158:2785..4307 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12158.1822.1mRNA_Ecto-sp13_S_contig12158.1822.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12158 2170..4549 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12158.1822.1 ID=prot_Ecto-sp13_S_contig12158.1822.1|Name=mRNA_Ecto-sp13_S_contig12158.1822.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=92bp
MTSTELMAKDKREAMDKAVSERTEARMLDWYDKNQDKINKQCGIKETEGM
FECGRCKSTKTTYTQKQTRSADEPMTTFVTCSNCKNRWKFC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001222Znf_TFIIS