prot_Ecto-sp13_S_contig71191.18216.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig71191.18216.1
Unique Nameprot_Ecto-sp13_S_contig71191.18216.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length73
Homology
BLAST of mRNA_Ecto-sp13_S_contig71191.18216.1 vs. uniprot
Match: D8LHR8_ECTSI (CTLH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHR8_ECTSI)

HSP 1 Score: 123 bits (309), Expect = 3.780e-31
Identity = 64/82 (78.05%), Postives = 66/82 (80.49%), Query Frame = 0
Query:    1 VRSVGFSADGGLFAVGCNDRTLRVCKTPSEAELASNTNGTIV---------AVLIRRENHHLGSIFCLGFSPDSSLLATGDD 73
            VRSVGFSADGGLFAVGCNDRTLRVCKTPSEAELASNT G              +IRRENHHLGSIFCLGFSPDSSLLATG +
Sbjct:  719 VRSVGFSADGGLFAVGCNDRTLRVCKTPSEAELASNTCGMDSDSPVQEWPSTEVIRRENHHLGSIFCLGFSPDSSLLATGSN 800          
BLAST of mRNA_Ecto-sp13_S_contig71191.18216.1 vs. uniprot
Match: A0A8J1UHZ6_OWEFU (Ofus.G131431 protein n=3 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1UHZ6_OWEFU)

HSP 1 Score: 73.6 bits (179), Expect = 1.430e-13
Identity = 32/73 (43.84%), Postives = 47/73 (64.38%), Query Frame = 0
Query:    1 VRSVGFSADGGLFAVGCNDRTLRVCKTPSEAELASNTNGTIVAVLIRRENHHLGSIFCLGFSPDSSLLATGDD 73
            +R+V F  +G L+AVG N +TLRVC  P+ + L  +   T   V+ +R  HH GSI+CLG++P   L+ATG +
Sbjct:  717 IRAVTFHPEGHLYAVGSNSKTLRVCSFPNVSNLKEDDEPTQTNVIFKRNKHHKGSIYCLGWNPGGDLIATGSN 789          
BLAST of mRNA_Ecto-sp13_S_contig71191.18216.1 vs. uniprot
Match: UPI000B902878 (WD repeat-containing protein 47 isoform X2 n=1 Tax=Folsomia candida TaxID=158441 RepID=UPI000B902878)

HSP 1 Score: 73.2 bits (178), Expect = 1.900e-13
Identity = 33/73 (45.21%), Postives = 46/73 (63.01%), Query Frame = 0
Query:    1 VRSVGFSADGGLFAVGCNDRTLRVCKTPSEAELASNTNGTIVAVLIRRENHHLGSIFCLGFSPDSSLLATGDD 73
            +R   F   G L+AVG N ++LR+C  P    L+ ++N     VL +R  HH GSI+CLG+SPD +LLATG +
Sbjct:  183 IRCAEFHPRGFLYAVGSNSKSLRICAYPDTKRLSKDSNPVQPNVLFKRNKHHRGSIYCLGWSPDGNLLATGSN 255          
BLAST of mRNA_Ecto-sp13_S_contig71191.18216.1 vs. uniprot
Match: UPI001604FDB0 (WD repeat-containing protein 47 isoform X1 n=1 Tax=Folsomia candida TaxID=158441 RepID=UPI001604FDB0)

HSP 1 Score: 73.2 bits (178), Expect = 1.900e-13
Identity = 33/73 (45.21%), Postives = 46/73 (63.01%), Query Frame = 0
Query:    1 VRSVGFSADGGLFAVGCNDRTLRVCKTPSEAELASNTNGTIVAVLIRRENHHLGSIFCLGFSPDSSLLATGDD 73
            +R   F   G L+AVG N ++LR+C  P    L+ ++N     VL +R  HH GSI+CLG+SPD +LLATG +
Sbjct:  196 IRCAEFHPRGFLYAVGSNSKSLRICAYPDTKRLSKDSNPVQPNVLFKRNKHHRGSIYCLGWSPDGNLLATGSN 268          
BLAST of mRNA_Ecto-sp13_S_contig71191.18216.1 vs. uniprot
Match: UPI001198263E (WD repeat-containing protein 47 isoform X2 n=1 Tax=Manduca sexta TaxID=7130 RepID=UPI001198263E)

HSP 1 Score: 72.8 bits (177), Expect = 2.630e-13
Identity = 33/73 (45.21%), Postives = 46/73 (63.01%), Query Frame = 0
Query:    1 VRSVGFSADGGLFAVGCNDRTLRVCKTPSEAELASNTNGTIVAVLIRRENHHLGSIFCLGFSPDSSLLATGDD 73
            VR   F  +G L+AVG N +TLR+C  P   ++  N+  T   VL++R  HH GSI+CL +SP+  LLATG +
Sbjct:  288 VRCAEFHPNGKLYAVGSNTKTLRICTYPKIEDVKDNSAPTAPTVLLKRTKHHKGSIYCLAWSPEGDLLATGSN 360          
BLAST of mRNA_Ecto-sp13_S_contig71191.18216.1 vs. uniprot
Match: A0A094ZT64_SCHHA (WD repeat-containing protein 47 n=9 Tax=Schistosoma TaxID=6181 RepID=A0A094ZT64_SCHHA)

HSP 1 Score: 72.8 bits (177), Expect = 2.670e-13
Identity = 32/73 (43.84%), Postives = 48/73 (65.75%), Query Frame = 0
Query:    1 VRSVGFSADGGLFAVGCNDRTLRVCKTPSEAELASNTNGTIVAVLIRRENHHLGSIFCLGFSPDSSLLATGDD 73
            +R + F   G L+AVG N + LRVC+ PS   L++N   T   VL+RR+ +H GSI+C+ +SPD  ++ATG +
Sbjct:  772 IRCIAFHPSGRLYAVGSNSKFLRVCQYPSLQHLSANHVATSPVVLMRRQKYHKGSIYCVAWSPDGRIIATGSN 844          
BLAST of mRNA_Ecto-sp13_S_contig71191.18216.1 vs. uniprot
Match: A0A1D2MX29_ORCCI (WD repeat-containing protein 47 n=1 Tax=Orchesella cincta TaxID=48709 RepID=A0A1D2MX29_ORCCI)

HSP 1 Score: 72.4 bits (176), Expect = 3.600e-13
Identity = 35/73 (47.95%), Postives = 44/73 (60.27%), Query Frame = 0
Query:    1 VRSVGFSADGGLFAVGCNDRTLRVCKTPSEAELASNTNGTIVAVLIRRENHHLGSIFCLGFSPDSSLLATGDD 73
            VR   F   G ++A+G N +TLRVC  P   EL  N       VL +R  HH GSI+CLG+SPD +LLATG +
Sbjct:  373 VRCAEFHPAGRVYAIGSNSKTLRVCAYPDLNELTENHVSYQPTVLFKRTKHHKGSIYCLGWSPDGNLLATGSN 445          
BLAST of mRNA_Ecto-sp13_S_contig71191.18216.1 vs. uniprot
Match: A0A226DWQ7_FOLCA (WD repeat-containing protein 47 n=1 Tax=Folsomia candida TaxID=158441 RepID=A0A226DWQ7_FOLCA)

HSP 1 Score: 72.0 bits (175), Expect = 4.940e-13
Identity = 31/73 (42.47%), Postives = 47/73 (64.38%), Query Frame = 0
Query:    1 VRSVGFSADGGLFAVGCNDRTLRVCKTPSEAELASNTNGTIVAVLIRRENHHLGSIFCLGFSPDSSLLATGDD 73
            +R   F  +G ++A+G N +TLRVC  P   +L+ + +     VL +R  HH GSI+C+G+SPD +LLATG +
Sbjct:  429 IRCAEFHPEGKVYAIGSNSKTLRVCSYPDLGDLSESHHPYQPTVLFKRTKHHKGSIYCMGWSPDGALLATGSN 501          
BLAST of mRNA_Ecto-sp13_S_contig71191.18216.1 vs. uniprot
Match: A0A4Z2DH44_SCHJA (WD repeat-containing protein n=2 Tax=Schistosoma japonicum TaxID=6182 RepID=A0A4Z2DH44_SCHJA)

HSP 1 Score: 72.0 bits (175), Expect = 4.990e-13
Identity = 32/73 (43.84%), Postives = 47/73 (64.38%), Query Frame = 0
Query:    1 VRSVGFSADGGLFAVGCNDRTLRVCKTPSEAELASNTNGTIVAVLIRRENHHLGSIFCLGFSPDSSLLATGDD 73
            +R + F   G L+AVG N + LRVC+ P+   L+ N   T   VL+RR+ +H GSI+C+ +SPD  L+ATG +
Sbjct:  774 IRCIAFHPSGRLYAVGSNSKFLRVCQYPNVQRLSPNHVATSPVVLMRRQKYHRGSIYCVAWSPDGRLIATGSN 846          
BLAST of mRNA_Ecto-sp13_S_contig71191.18216.1 vs. uniprot
Match: A0A8J2J3C0_9HEXA (Hypothetical protein n=1 Tax=Allacma fusca TaxID=39272 RepID=A0A8J2J3C0_9HEXA)

HSP 1 Score: 71.2 bits (173), Expect = 9.240e-13
Identity = 33/73 (45.21%), Postives = 43/73 (58.90%), Query Frame = 0
Query:    1 VRSVGFSADGGLFAVGCNDRTLRVCKTPSEAELASNTNGTIVAVLIRRENHHLGSIFCLGFSPDSSLLATGDD 73
            VR   F   G ++A+G N +TLRVC  P   +L  N       VL +R  HH GSI+C+G+SPD  LLATG +
Sbjct:  470 VRCAEFHPSGKVYAIGSNSKTLRVCAYPDLIDLTENHVAYQPTVLFKRTKHHKGSIYCMGWSPDGKLLATGSN 542          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig71191.18216.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHR8_ECTSI3.780e-3178.05CTLH domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A8J1UHZ6_OWEFU1.430e-1343.84Ofus.G131431 protein n=3 Tax=Owenia fusiformis Tax... [more]
UPI000B9028781.900e-1345.21WD repeat-containing protein 47 isoform X2 n=1 Tax... [more]
UPI001604FDB01.900e-1345.21WD repeat-containing protein 47 isoform X1 n=1 Tax... [more]
UPI001198263E2.630e-1345.21WD repeat-containing protein 47 isoform X2 n=1 Tax... [more]
A0A094ZT64_SCHHA2.670e-1343.84WD repeat-containing protein 47 n=9 Tax=Schistosom... [more]
A0A1D2MX29_ORCCI3.600e-1347.95WD repeat-containing protein 47 n=1 Tax=Orchesella... [more]
A0A226DWQ7_FOLCA4.940e-1342.47WD repeat-containing protein 47 n=1 Tax=Folsomia c... [more]
A0A4Z2DH44_SCHJA4.990e-1343.84WD repeat-containing protein n=2 Tax=Schistosoma j... [more]
A0A8J2J3C0_9HEXA9.240e-1345.21Hypothetical protein n=1 Tax=Allacma fusca TaxID=3... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatPFAMPF00400WD40coord: 1..24
e-value: 0.23
score: 12.4
coord: 51..73
e-value: 0.0061
score: 17.4
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..73
e-value: 3.9E-12
score: 48.2
IPR040067WD repeat-containing protein 47PANTHERPTHR19863FAMILY NOT NAMEDcoord: 1..71
NoneNo IPR availablePANTHERPTHR19863:SF5WD REPEAT-CONTAINING PROTEIN 47coord: 1..71
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..73
score: 8.993
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 1..72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig71191contigEcto-sp13_S_contig71191:177..673 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig71191.18216.1mRNA_Ecto-sp13_S_contig71191.18216.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig71191 177..673 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig71191.18216.1 ID=prot_Ecto-sp13_S_contig71191.18216.1|Name=mRNA_Ecto-sp13_S_contig71191.18216.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=73bp
VRSVGFSADGGLFAVGCNDRTLRVCKTPSEAELASNTNGTIVAVLIRREN
HHLGSIFCLGFSPDSSLLATGDD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR040067WDR47
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf