prot_Ecto-sp13_S_contig7094.18179.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7094.18179.1
Unique Nameprot_Ecto-sp13_S_contig7094.18179.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length297
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7094.18179.1 vs. uniprot
Match: A0A6H5J9X3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9X3_9PHAE)

HSP 1 Score: 411 bits (1056), Expect = 2.940e-138
Identity = 194/205 (94.63%), Postives = 199/205 (97.07%), Query Frame = 0 
Query:   92 TLPAVGNVTTETPVGGGGNNLAATPSPTVLVLVNNTQAPSFDYEDEDACILPESKPCTEATSFSNTNEGIGDYYEPACELVEGEEQLGGCNADASSLCRMCFFNTPLYVEKHPDEDLPDYPDCPCCVLDIYEQDAFNLDGQRCVSASPAPSTPALTEIPVGEIEPRSFDDISFDDGGWEMNAGEVAALSALGLLATLTFFPFCSK 296
            TLPAVGNV TETPVGGGG++LAATPSPTVLVLVNNTQAPSFDYEDE ACILPESKPCTEATSFSNTNEGIGDYY+PACELVEGEEQLGGCNADASSLCRMCFFNTPLYV KHPDEDLPDYPDCPCCVLDIYEQDAFNLDGQRCVSASPAPS+PALTEIPVGEI PR FDD+SFDDGGWEMNAGEVAALSALGLLA LTFFPFCSK
Sbjct:  364 TLPAVGNVMTETPVGGGGDDLAATPSPTVLVLVNNTQAPSFDYEDEGACILPESKPCTEATSFSNTNEGIGDYYDPACELVEGEEQLGGCNADASSLCRMCFFNTPLYVAKHPDEDLPDYPDCPCCVLDIYEQDAFNLDGQRCVSASPAPSSPALTEIPVGEITPRGFDDLSFDDGGWEMNAGEVAALSALGLLAALTFFPFCSK 568
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BLAST of mRNA_Ecto-sp13_S_contig7094.18179.1 vs. uniprot
Match: A0A6H5JBT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBT9_9PHAE)

HSP 1 Score: 133 bits (335), Expect = 1.380e-31
Identity = 77/186 (41.40%), Postives = 102/186 (54.84%), Query Frame = 0 
Query:  113 AATPSPTVLVLVNNTQAPSFDYEDED-ACILPESKPCTEATSFSNTNEGIGDYYEPACELVEGEEQLGGCNADASSLCRMCFFNTPLYVEKHPDE-DLPDYPDCPCCVLDIYEQDAFNLDGQRCVSASPAPSTPALTEIPVGEIEPRSFDDISFDDGGWEMNAGEVAALSALGLLATLTFFPFCSK 296
            A TP PTV VL + T AP  + E E  AC  P   PCT  T FS+ N G+G YY+P C          GC    S LCR C+FN  +  E + D+ D+PDYP+CPCCV+D Y++ A      RCV A+P+P+    TE         + +  SF+D   +M+ GE  A++AL L   LTF P C+K
Sbjct:  442 AVTPGPTV-VLYSETLAPLTEEELEQVACTWPLDGPCTTETLFSDINRGLGAYYDPGCSGA-------GCGVGDSGLCRTCYFNLTMGEEGNDDDVDMPDYPECPCCVMDEYDRSA-----DRCVGATPSPAQGTGTE---------ALETYSFEDKPLDMSGGEGFAVAALALFGLLTFLPLCTK 605
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BLAST of mRNA_Ecto-sp13_S_contig7094.18179.1 vs. uniprot
Match: D8LE45_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE45_ECTSI)

HSP 1 Score: 102 bits (255), Expect = 2.530e-24
Identity = 42/43 (97.67%), Postives = 43/43 (100.00%), Query Frame = 0 
Query:  191 MCFFNTPLYVEKHPDEDLPDYPDCPCCVLDIYEQDAFNLDGQR 233
            MCFFNTPLYVEKHPDEDLPDYPDCPCCVLDIYEQDAF+LDGQR
Sbjct:    1 MCFFNTPLYVEKHPDEDLPDYPDCPCCVLDIYEQDAFSLDGQR 43
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7094.18179.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5J9X3_9PHAE2.940e-13894.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBT9_9PHAE1.380e-3141.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LE45_ECTSI2.530e-2497.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7094contigEcto-sp13_S_contig7094:560..4195 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7094.18179.1mRNA_Ecto-sp13_S_contig7094.18179.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7094 33..4195 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7094.18179.1 ID=prot_Ecto-sp13_S_contig7094.18179.1|Name=mRNA_Ecto-sp13_S_contig7094.18179.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=297bp
PAPTPSPVTPSTPAPVTPLTEPPTEPATEPPTAPATPAPTTAVAAAATPG
PVAALTPTAAPQAAAAAATPAPVLASLAPVAPPANTATAAPTLPAVGNVT
TETPVGGGGNNLAATPSPTVLVLVNNTQAPSFDYEDEDACILPESKPCTE
ATSFSNTNEGIGDYYEPACELVEGEEQLGGCNADASSLCRMCFFNTPLYV
EKHPDEDLPDYPDCPCCVLDIYEQDAFNLDGQRCVSASPAPSTPALTEIP
VGEIEPRSFDDISFDDGGWEMNAGEVAALSALGLLATLTFFPFCSK*
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