prot_Ecto-sp13_S_contig70892.18172.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig70892.18172.1
Unique Nameprot_Ecto-sp13_S_contig70892.18172.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length44
Homology
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BLAST of mRNA_Ecto-sp13_S_contig70892.18172.1 vs. uniprot
Match: D8LC74_ECTSI (Kinesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC74_ECTSI)

HSP 1 Score: 51.6 bits (122), Expect = 2.230e-6
Identity = 23/28 (82.14%), Postives = 26/28 (92.86%), Query Frame = 0 
Query:   17 YLFLEGPEEEEASFPPLESVRQMREICR 44
            ++  +GPEEEEASFPPLESVRQMREICR
Sbjct:  418 FVAAQGPEEEEASFPPLESVRQMREICR 445
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig70892.18172.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LC74_ECTSI2.230e-682.14Kinesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig70892contigEcto-sp13_S_contig70892:39..170 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig70892.18172.1mRNA_Ecto-sp13_S_contig70892.18172.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig70892 39..170 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig70892.18172.1 ID=prot_Ecto-sp13_S_contig70892.18172.1|Name=mRNA_Ecto-sp13_S_contig70892.18172.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=44bp
QLVSCRTFSAPISPCTYLFLEGPEEEEASFPPLESVRQMREICR
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