prot_Ecto-sp13_S_contig70855.18167.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig70855.18167.1
Unique Nameprot_Ecto-sp13_S_contig70855.18167.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length43
Homology
BLAST of mRNA_Ecto-sp13_S_contig70855.18167.1 vs. uniprot
Match: D8LEW6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEW6_ECTSI)

HSP 1 Score: 87.4 bits (215), Expect = 5.190e-19
Identity = 42/42 (100.00%), Postives = 42/42 (100.00%), Query Frame = 0
Query:    1 MSKGVKCGGTHYQRAARLFSLKRLAPEDYPQELFAKKAKKSS 42
            MSKGVKCGGTHYQRAARLFSLKRLAPEDYPQELFAKKAKKSS
Sbjct:  594 MSKGVKCGGTHYQRAARLFSLKRLAPEDYPQELFAKKAKKSS 635          
BLAST of mRNA_Ecto-sp13_S_contig70855.18167.1 vs. uniprot
Match: A0A2H1CGP1_FASHE (Uncharacterized protein n=1 Tax=Fasciola hepatica TaxID=6192 RepID=A0A2H1CGP1_FASHE)

HSP 1 Score: 54.3 bits (129), Expect = 1.330e-7
Identity = 24/36 (66.67%), Postives = 31/36 (86.11%), Query Frame = 0
Query:    1 MSKGVKCGGTHYQRAARLFSLKRLAPEDYPQELFAK 36
            ++KG+KCGGT  +RAARLFS++ LAPEDYP +L AK
Sbjct:  165 IAKGIKCGGTLSERAARLFSIRDLAPEDYPAKLRAK 200          
BLAST of mRNA_Ecto-sp13_S_contig70855.18167.1 vs. uniprot
Match: A0A7R8WK62_9CRUS (Replication stress response regulator SDE2 n=1 Tax=Cyprideis torosa TaxID=163714 RepID=A0A7R8WK62_9CRUS)

HSP 1 Score: 53.5 bits (127), Expect = 4.450e-7
Identity = 25/41 (60.98%), Postives = 31/41 (75.61%), Query Frame = 0
Query:    2 SKGVKCGGTHYQRAARLFSLKRLAPEDYPQELFAKKAKKSS 42
            ++G+KCGGT  QRA RLFS+K LAPE+YP    AKK KK +
Sbjct:  303 NRGLKCGGTLTQRAERLFSVKGLAPENYPASALAKKKKKQT 343          
BLAST of mRNA_Ecto-sp13_S_contig70855.18167.1 vs. uniprot
Match: UPI00146DB8CA (replication stress response regulator SDE2 isoform X1 n=3 Tax=Notothenioidei TaxID=8205 RepID=UPI00146DB8CA)

HSP 1 Score: 53.1 bits (126), Expect = 6.090e-7
Identity = 25/39 (64.10%), Postives = 30/39 (76.92%), Query Frame = 0
Query:    1 MSKGVKCGGTHYQRAARLFSLKRLAPEDYPQELFAKKAK 39
            MS+G+KCGGT  +RAARLFS++ L PED P  L AKK K
Sbjct:  560 MSRGLKCGGTLSERAARLFSVRALKPEDVPAALLAKKKK 598          
BLAST of mRNA_Ecto-sp13_S_contig70855.18167.1 vs. uniprot
Match: A0A183AP33_9TREM (Replication stress response regulator SDE2 n=1 Tax=Echinostoma caproni TaxID=27848 RepID=A0A183AP33_9TREM)

HSP 1 Score: 52.8 bits (125), Expect = 8.140e-7
Identity = 24/35 (68.57%), Postives = 29/35 (82.86%), Query Frame = 0
Query:    2 SKGVKCGGTHYQRAARLFSLKRLAPEDYPQELFAK 36
            SKG+KCGGT  +RA RLFS++ LAPEDYP +L AK
Sbjct:  285 SKGLKCGGTLSERATRLFSIRDLAPEDYPAKLRAK 319          
BLAST of mRNA_Ecto-sp13_S_contig70855.18167.1 vs. uniprot
Match: A0A504YQD7_FASGI (Replication stress response regulator SDE2 n=2 Tax=Fasciola TaxID=6191 RepID=A0A504YQD7_FASGI)

HSP 1 Score: 52.8 bits (125), Expect = 8.280e-7
Identity = 23/36 (63.89%), Postives = 30/36 (83.33%), Query Frame = 0
Query:    1 MSKGVKCGGTHYQRAARLFSLKRLAPEDYPQELFAK 36
            ++KG+KCGGT  +RAARLFS++ LAPEDYP +L  K
Sbjct:  314 IAKGIKCGGTLSERAARLFSIRGLAPEDYPAKLRTK 349          
BLAST of mRNA_Ecto-sp13_S_contig70855.18167.1 vs. uniprot
Match: A0A4S2MCZ7_OPIFE (Replication stress response regulator SDE2 n=1 Tax=Opisthorchis felineus TaxID=147828 RepID=A0A4S2MCZ7_OPIFE)

HSP 1 Score: 52.0 bits (123), Expect = 1.550e-6
Identity = 22/36 (61.11%), Postives = 30/36 (83.33%), Query Frame = 0
Query:    1 MSKGVKCGGTHYQRAARLFSLKRLAPEDYPQELFAK 36
            +++G+KCGGT  +RAARLFS++ L PEDYP +L AK
Sbjct:  306 VARGLKCGGTIQERAARLFSIRGLQPEDYPPKLLAK 341          
BLAST of mRNA_Ecto-sp13_S_contig70855.18167.1 vs. uniprot
Match: G7YF47_CLOSI (Replication stress response regulator SDE2 n=2 Tax=Clonorchis sinensis TaxID=79923 RepID=G7YF47_CLOSI)

HSP 1 Score: 50.1 bits (118), Expect = 7.460e-6
Identity = 21/36 (58.33%), Postives = 30/36 (83.33%), Query Frame = 0
Query:    1 MSKGVKCGGTHYQRAARLFSLKRLAPEDYPQELFAK 36
            +++G+KCGGT  +RAARLFS++ L PEDYP ++ AK
Sbjct:  328 VARGLKCGGTIQERAARLFSIRGLQPEDYPPKIRAK 363          
BLAST of mRNA_Ecto-sp13_S_contig70855.18167.1 vs. uniprot
Match: A0A7E4VTN2_PANRE (Replication stress response regulator SDE2 n=1 Tax=Panagrellus redivivus TaxID=6233 RepID=A0A7E4VTN2_PANRE)

HSP 1 Score: 49.3 bits (116), Expect = 1.380e-5
Identity = 22/39 (56.41%), Postives = 31/39 (79.49%), Query Frame = 0
Query:    2 SKGVKCGGTHYQRAARLFSLKRLAPEDYPQELFAKKAKK 40
            ++G+KCGGT  +RAARLFS+K L P+ YP+++ A  AKK
Sbjct:  280 ARGLKCGGTATERAARLFSVKGLTPDKYPKKIRAAPAKK 318          
BLAST of mRNA_Ecto-sp13_S_contig70855.18167.1 vs. uniprot
Match: A0A3P7PYP7_DRAME (Replication stress response regulator SDE2 n=2 Tax=Dracunculus medinensis TaxID=318479 RepID=A0A3P7PYP7_DRAME)

HSP 1 Score: 48.9 bits (115), Expect = 1.760e-5
Identity = 20/36 (55.56%), Postives = 29/36 (80.56%), Query Frame = 0
Query:    2 SKGVKCGGTHYQRAARLFSLKRLAPEDYPQELFAKK 37
            ++G+KCGG+  +RAARLFS+K L PE+YP+ +  KK
Sbjct:  227 ARGMKCGGSLAERAARLFSVKNLKPEEYPKSVLVKK 262          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig70855.18167.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
D8LEW6_ECTSI5.190e-19100.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A2H1CGP1_FASHE1.330e-766.67Uncharacterized protein n=1 Tax=Fasciola hepatica ... [more]
A0A7R8WK62_9CRUS4.450e-760.98Replication stress response regulator SDE2 n=1 Tax... [more]
UPI00146DB8CA6.090e-764.10replication stress response regulator SDE2 isoform... [more]
A0A183AP33_9TREM8.140e-768.57Replication stress response regulator SDE2 n=1 Tax... [more]
A0A504YQD7_FASGI8.280e-763.89Replication stress response regulator SDE2 n=2 Tax... [more]
A0A4S2MCZ7_OPIFE1.550e-661.11Replication stress response regulator SDE2 n=1 Tax... [more]
G7YF47_CLOSI7.460e-658.33Replication stress response regulator SDE2 n=2 Tax... [more]
A0A7E4VTN2_PANRE1.380e-556.41Replication stress response regulator SDE2 n=1 Tax... [more]
A0A3P7PYP7_DRAME1.760e-555.56Replication stress response regulator SDE2 n=2 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13297Telomere_Sde2_2coord: 1..36
e-value: 6.9E-15
score: 54.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig70855contigEcto-sp13_S_contig70855:558..686 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig70855.18167.1mRNA_Ecto-sp13_S_contig70855.18167.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig70855 558..695 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig70855.18167.1 ID=prot_Ecto-sp13_S_contig70855.18167.1|Name=mRNA_Ecto-sp13_S_contig70855.18167.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=43bp
MSKGVKCGGTHYQRAARLFSLKRLAPEDYPQELFAKKAKKSS*
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