mRNA_Ecto-sp13_S_contig7043.18105.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7043.18105.1
Unique NamemRNA_Ecto-sp13_S_contig7043.18105.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig7043.18105.1 vs. uniprot
Match: D8LPI5_ECTSI (EsV-1-166 n=2 Tax=root TaxID=1 RepID=D8LPI5_ECTSI)

HSP 1 Score: 662 bits (1709), Expect = 2.610e-238
Identity = 314/371 (84.64%), Postives = 335/371 (90.30%), Query Frame = 3
Query:  168 MNILELFFALAPLVESHLYMAQPVSRQFWQTVAFQSAPTEYCPHCYNFRGVSAVQERGGGGPWPHLKLYEEGKLNTNGNYMETSATAVRHVSPCGDPVQTASSDTSNVYGMANWNYPVLTEFQQNSEFQVKIVVSTHHWGHIELNLCDASGMEDAEVTHECLSRYPLDRAPAEMEPPIDPLHPGRYFLDPPCRSAETDQSFDTGGAEGGDIVTMTFKLPPVLTCDRCVLQMMYYVSNACVHPGYATFESDDWPPGCAPAKNDWVSEGMAVCGTEGTNYVEEFASCADISIVGEDDTIDTAKGSATATTNDITTTAED----DDATCDCSNACVSVWKQCGGGGDDGFNGSQTCCEGATCVQRSDSYAQCVP 1268
            MNIL+LF ALAP+V+SHLYMAQPVSRQFWQT+AFQS+PTEYCPHCYNFRG+SAVQERGGGGPWPHLKLYEEGKLNTNGNYMETSAT+ RHVSPCGDPVQTASSD+SNVYG+AN NYPVLTEF+Q SEFQVK+VVSTHHWGHIELNLCDASGMEDAEVTHECLS+YPLDRA AEMEPPIDPLHPGRYFLDPPCRSAETDQSFDTGGAEGGDIVTMTFKLPPVLTCDRCVLQMMYYVSNACVHPGYA+FESDDWP GCAP K+DW+SEGMAVCGTEGTNYVEEFASCAD++IVG+D   DTA GSAT                D ATCDCS  CV VWKQCGGG D  F+GS+TCCEGATCVQ S SYAQC+P
Sbjct:    1 MNILKLFLALAPVVKSHLYMAQPVSRQFWQTLAFQSSPTEYCPHCYNFRGISAVQERGGGGPWPHLKLYEEGKLNTNGNYMETSATSARHVSPCGDPVQTASSDSSNVYGLANSNYPVLTEFRQESEFQVKVVVSTHHWGHIELNLCDASGMEDAEVTHECLSKYPLDRASAEMEPPIDPLHPGRYFLDPPCRSAETDQSFDTGGAEGGDIVTMTFKLPPVLTCDRCVLQMMYYVSNACVHPGYASFESDDWPSGCAPTKHDWISEGMAVCGTEGTNYVEEFASCADVTIVGKDGATDTAVGSATXXXXXXXXXXXXXXXXDGATCDCSKTCVDVWKQCGGGDD--FSGSRTCCEGATCVQHSGSYAQCLP 369          
BLAST of mRNA_Ecto-sp13_S_contig7043.18105.1 vs. uniprot
Match: D8LD67_ECTSI (EsV-1-166 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD67_ECTSI)

HSP 1 Score: 295 bits (754), Expect = 1.320e-91
Identity = 148/294 (50.34%), Postives = 186/294 (63.27%), Query Frame = 3
Query:  186 FFALAPLVESHLYMAQPVSRQFWQTVAFQ---SAPTEYCPHCYNFRGVSAVQERGGGGPWPHLKLYEEGKLNTNGNYMETSATAVRHVSPCGDPVQTASSDTSNVYGMANWNYPVLTEFQQNSEFQVKIVVSTHHWGHIELNLCDASGMEDAE---VTHECLSRYPLDRAPA-EMEPPIDPLHPGRYFLDPPCRSAETDQSFDTGGAEGGDIVTMTFKLPPVLTCDRCVLQMMYYVSNACVHPGYATFESDDWPPGCAPAKNDWVSEGMAVCGTEGTNYVEEFASCADISIVGE 1046
            FFA  P+ + H+YM  PVSRQ W T AFQ   S    YCPHC+  RG +A++ RGG  PWPH      G+   NGNY+E+   A RH   CGDP QTA+ + SN YG  N NYPVL  + +    +VKIVVST+HWGH+E+ LCDA  + D     VT  C + YPLDRA   E   PIDPL+ GR+ LDPPCR++ETDQ     GA  GD+ T  F+LP  +TC+RCV+QM YY  N+C H GYA F    WP  CAP+K DW++E +  CG +G  Y EEF +CAD+SI  +
Sbjct:   16 FFAQLPVSDGHVYMMNPVSRQLWGTEAFQEPGSPDINYCPHCFQSRGPAAIRARGGDQPWPHFN----GERAKNGNYIESDEVAQRH-GVCGDPEQTAA-EGSNKYGQENSNYPVLETYAEGGILEVKIVVSTYHWGHVEMFLCDADDLPDGPDSVVTQSCFNEYPLDRAEDDEFNGPIDPLNRGRFILDPPCRASETDQEL-LPGAFAGDVATARFQLPQGVTCERCVVQMAYYTGNSCKHQGYAEFNPPSWPSSCAPSKADWINEAVGQCG-DGDAYPEEFWNCADVSITSD 301          
BLAST of mRNA_Ecto-sp13_S_contig7043.18105.1 vs. uniprot
Match: D8LM93_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM93_ECTSI)

HSP 1 Score: 286 bits (732), Expect = 2.250e-90
Identity = 147/294 (50.00%), Postives = 188/294 (63.95%), Query Frame = 3
Query:  186 FFALAPLVESHLYMAQPVSRQFWQTVAFQSAPT---EYCPHCYNFRGVSAVQERGGGGPWPHLKLYEEGKLNTNGNYMETSATAVRHVSPCGDPVQTASSDTSNVYGMANWNYPVLTEFQQNSEFQVKIVVSTHHWGHIELNLCDAS---GMEDAEVTHECLSRYPLDRAPA-EMEPPIDPLHPGRYFLDPPCRSAETDQSFDTGGAEGGDIVTMTFKLPPVLTCDRCVLQMMYYVSNACVHPGYATFESDDWPPGCAPAKNDWVSEGMAVCGTEGTNYVEEFASCADISIVGE 1046
            FFA  P  +SH+YM  PVSRQ W T AFQ A +    YCPHC+  RG +AV+ RGG  PWPH      G+   NGNY+E+   A RH   CGDP QTA+ ++SN YG  N NYPV   + +    +VKIVVST+HWGH+E+ LC+A+   G  D+ VT  C + +PLDRA   E   P DP + GR+ LDPPCR++ETDQ+    GA   D+ T  FKLP  L+C+RCV+QM+YY  N+C H GYA F    WP  CAP+K DW++E +  CG +G  Y EEF +CADISI  +
Sbjct:   19 FFAQLPTGDSHVYMMTPVSRQLWGTSAFQDAGSPDINYCPHCFQSRGPAAVRARGGDKPWPHFN----GERAENGNYIESEEVARRH-GICGDPEQTAA-ESSNKYGQENSNYPVRETYAEGGILEVKIVVSTYHWGHVEMFLCNAANLPGGPDSTVTQSCFNEHPLDRADDDEFNGPADPDNTGRFILDPPCRASETDQAL-LDGAYPSDVATARFKLPQGLSCERCVVQMVYYTGNSCKHQGYAEFNPPSWPSSCAPSKADWINEVVGQCG-DGDAYPEEFWNCADISITSD 304          
BLAST of mRNA_Ecto-sp13_S_contig7043.18105.1 vs. uniprot
Match: D8LM92_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM92_ECTSI)

HSP 1 Score: 291 bits (746), Expect = 4.990e-88
Identity = 149/296 (50.34%), Postives = 186/296 (62.84%), Query Frame = 3
Query:  186 FFALAPLVESHLYMAQPVSRQFWQTVAFQ---SAPTEYCPHCYNFRGVSAVQERGGGGPWPHLKLYEEGKLNTNGNYMETSATAVRHVSPCGDPVQTASSDTSNVYGMANWNYPVLTEFQQNSEFQVKIVVSTHHWGHIELNLCDAS---GMEDAEVTHECLSRYPLDRAPAE-MEPPIDPLHPGRYFLDPPCRSAETDQSFDTGGAEGGDIVTMTFKLPPVLTCDRCVLQMMYYVSNACVHPGYATFESDDWPPGCAPAKNDWVSEGMAVCGTEGTNYVEEFASCADISIVGEDD 1052
            FFA  P  +SH YM  PVSRQ W T AFQ   S    YCPHC+  RG +A++ RGG  PWPH      G+   NGNY+E+   A RH   CGDP QTA+ D SN YG+ N NYPVL  + +    + K+VVST+HWGH+E+ LCDA    G  D+ VT  C + +PLDR   +    PIDP + GR+ LDPPCR++ETDQ     GA  GD+ T  FKLP  LTC+RCV+QM+YY  N+C H GYA F  + WP  CAP K DW++E +  CG +G  Y EEF +CADISI  + D
Sbjct:   18 FFAQLPTGDSHAYMMIPVSRQLWGTSAFQEVGSPDINYCPHCFQSRGPAAIRARGGDKPWPHFN----GERAENGNYIESEEVAQRH-GICGDPEQTAAED-SNKYGLENSNYPVLETYAEGGILEFKMVVSTYHWGHVEMFLCDADDLPGGPDSTVTQSCFNEHPLDRVDDDDFNSPIDPSNTGRFILDPPCRASETDQEM-LDGAFPGDVATARFKLPQGLTCERCVVQMVYYTGNSCKHQGYAEFNPESWPSSCAPTKADWINEVVGHCG-DGDAYPEEFWNCADISITSDGD 305          
BLAST of mRNA_Ecto-sp13_S_contig7043.18105.1 vs. uniprot
Match: A0A6H5KTY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTY6_9PHAE)

HSP 1 Score: 292 bits (748), Expect = 1.110e-86
Identity = 148/296 (50.00%), Postives = 188/296 (63.51%), Query Frame = 3
Query:  186 FFALAPLVESHLYMAQPVSRQFWQTVAFQSAPT---EYCPHCYNFRGVSAVQERGGGGPWPHLKLYEEGKLNTNGNYMETSATAVRHVSPCGDPVQTASSDTSNVYGMANWNYPVLTEFQQNSEFQVKIVVSTHHWGHIELNLCDAS---GMEDAEVTHECLSRYPLDRAPAE-MEPPIDPLHPGRYFLDPPCRSAETDQSFDTGGAEGGDIVTMTFKLPPVLTCDRCVLQMMYYVSNACVHPGYATFESDDWPPGCAPAKNDWVSEGMAVCGTEGTNYVEEFASCADISIVGEDD 1052
            FFA  P  +SH YM  PVSRQ W T AFQ A +    YCPHC+  RG +AV+ RGG  PWPH      G    NGNY+E+   A RH   CGDP QTA+ + SN+YG+ N NYPVL  + +    + K+VVST+HWGH+E+ LCDA+   G  D+ VT  C + +PLDR   +    PIDP + GR+ LDPPCR++ETDQ     GA  GD+ T  FKLP  ++C+RCV+QM+YY  N+C H GYA F  D WP  CAP K DW++E +  CG +G  Y EEF +CADISI  + D
Sbjct:   18 FFAQLPTGDSHAYMMIPVSRQLWGTTAFQEAGSPNINYCPHCFQSRGAAAVRARGGDQPWPHFN----GDRAANGNYIESEEVAQRH-GICGDPEQTAA-EGSNLYGLENSNYPVLETYAEGGILEFKMVVSTYHWGHVEMFLCDANDLPGGPDSTVTQSCFNEHPLDRVDDDYFNSPIDPSNTGRFILDPPCRASETDQEL-LDGAFPGDVATARFKLPEGVSCERCVVQMVYYTGNSCKHQGYAEFNPDSWPSSCAPTKADWINELVGFCG-DGDAYPEEFWNCADISITSDGD 305          
BLAST of mRNA_Ecto-sp13_S_contig7043.18105.1 vs. uniprot
Match: D8LMF4_ECTSI (EsV-1-166 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMF4_ECTSI)

HSP 1 Score: 281 bits (719), Expect = 4.890e-86
Identity = 140/294 (47.62%), Postives = 183/294 (62.24%), Query Frame = 3
Query:  186 FFALAPLVESHLYMAQPVSRQFWQTVAFQ---SAPTEYCPHCYNFRGVSAVQERGGGGPWPHLKLYEEGKLNTNGNYMETSATAVRHVSPCGDPVQTASSDTSNVYGMANWNYPVLTEFQQNSEFQVKIVVSTHHWGHIELNLCDASGM---EDAEVTHECLSRYPLDRA-PAEMEPPIDPLHPGRYFLDPPCRSAETDQSFDTGGAEGGDIVTMTFKLPPVLTCDRCVLQMMYYVSNACVHPGYATFESDDWPPGCAPAKNDWVSEGMAVCGTEGTNYVEEFASCADISIVGE 1046
            F A  P+ + H+YM  P+SRQ   T  F      P  +CPHCY  RG +A++ER G  PWPH     +G    NGNY+E+   A RH   CGDP QTA+ +  N YG  N+NYPVL  + +    +VKI+VST+HWGH+E  LCD + +   ED+ VT  C + YPLDRA   E   PIDP + GR+ LDPPCR++ETDQ     GA  GD+ T  ++LP  + CDRCV+QM+YY  N+C H GYA F  + WP  CAP+K DW++E +  CG +G  Y EEF +CADISI  +
Sbjct:   23 FLAQLPVSDGHVYMMTPISRQLGGTTPFNPEGEVPVNFCPHCYQSRGPAAIRERSGDKPWPHY----QGARAANGNYLESDEVAQRH-GICGDPEQTAA-EGDNKYGRENYNYPVLGTYAEGGVLEVKILVSTYHWGHVEAFLCDTADLPEGEDSIVTQSCFNDYPLDRAIDDEFNGPIDPEYKGRFILDPPCRASETDQDL-VEGAYPGDVATARYQLPEGVVCDRCVVQMVYYTGNSCKHEGYAEFNPESWPSSCAPSKADWINEVVGQCG-DGDAYPEEFWNCADISITSD 308          
BLAST of mRNA_Ecto-sp13_S_contig7043.18105.1 vs. uniprot
Match: A0A6H5KD35_9PHAE (CBM1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD35_9PHAE)

HSP 1 Score: 253 bits (646), Expect = 7.140e-76
Identity = 128/262 (48.85%), Postives = 164/262 (62.60%), Query Frame = 3
Query:  273 SAPTEYCPHCYNFRGVSAVQERGGGGPWPHLKLYEEGKLNTNGNYMETSATAVRHVSPCGDPVQTASSDTSNVYGMANWNYPVLTEFQQNSEFQVKIVVSTHHWGHIELNLCDASGMEDAE---VTHECLSRYPLDRAPA-EMEPPIDPLHPGRYFLDPPCRSAETDQSFDTGGAEGGDIVTMTFKLPPVLTCDRCVLQMMYYVSNACVHPGYATFESDDWPPGCAPAKNDWVSEGMAVCGTEGTNYVEEFASCADISIVGE 1046
            S    YCPHC+  RG +A++ RGG  PWPH      G+   NGNY+E+   A RH   CGDP QTA+ + SN YG  N  YPVL  + +    +VKIVVST+HWGH+E+ LCDA  + D     VT  C + +PLDRA   E   PIDPL+ GR+ LDPPCR++ETDQ     GA  GD+ T  F+LP  +TC+RCV+QM Y+  N+C H GYA F    WP  CAP+K DW+ E +  CG +G  Y EEF +CAD+SI  +
Sbjct:   19 SPDINYCPHCFQSRGPAAIRARGGDQPWPHFN----GERAENGNYIESDEVAQRH-GVCGDPEQTAA-EGSNKYGQENSKYPVLETYAEGGILEVKIVVSTYHWGHVEMFLCDADDLPDGPDSVVTQSCFNEHPLDRAEDDEFNGPIDPLNRGRFILDPPCRASETDQEL-VPGAFPGDVATARFQLPQGVTCERCVVQMAYW--NSCKHQGYAEFNPPSWPGSCAPSKADWIKEAVGQCG-DGDAYPEEFWNCADVSITSD 270          
BLAST of mRNA_Ecto-sp13_S_contig7043.18105.1 vs. uniprot
Match: D7FP25_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP25_ECTSI)

HSP 1 Score: 223 bits (568), Expect = 3.530e-65
Identity = 122/291 (41.92%), Postives = 158/291 (54.30%), Query Frame = 3
Query:  186 FFALAPLVESHLYMAQPVSRQFWQTVAFQSAPTEYCPHCYNFRGVSAVQERGGGGPWPHLKLYEEGKLNTNGNYMETSATAVRHVSPCGDPVQTASSDTSNVYGMANWNYPVLTEFQQNSEFQVKIVVSTHHWGHIELNLCDASGMEDAE---VTHECLSRYPLDRAPA-EMEPPIDPLHPGRYFLDPPCRSAETDQSFDTGGAEGGDIVTMTFKLPPVLTCDRCVLQMMYYVSNACVHPGYATFESDDWPPGCAPAKNDWVSEGMAVCGTEGTNYVEEFASCADISIVGE 1046
            FFA  P+ + H+YM  PVSRQ W T AFQ                    E GG                 NGNY+++  TA               ++ SN YG  N NYPVL  + +    +VKIVV+T+HWGH+E+ LCDA  + D     VT  C + YPLDRA   E   PIDPL+ GR+ LDPPCR++ETDQ     GA  GD+ T  F+LP  +TC+RCV+QM+YY  N+C H GYA F    WP  CAP+K DW++E +     +G  Y EEF +CAD+SI  +
Sbjct:   16 FFAQLPVSDGHVYMMNPVSRQLWGTEAFQ--------------------EPGG-----------------NGNYIQSDETA---------------AEGSNRYGQENSNYPVLETYAEGGILEVKIVVATYHWGHVEMFLCDADDLPDGPDSVVTQSCFNEYPLDRAEDDEFNSPIDPLNRGRFILDPPCRASETDQEL-LPGAFAGDVATARFQLPQGVTCERCVVQMVYYTGNSCKHQGYAEFNPPSWPSSCAPSKADWINEIVGQHCGDGDAYPEEFWNCADVSITSD 253          
BLAST of mRNA_Ecto-sp13_S_contig7043.18105.1 vs. uniprot
Match: A0A6H5JFL8_9PHAE (CBM1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFL8_9PHAE)

HSP 1 Score: 195 bits (496), Expect = 3.070e-53
Identity = 106/295 (35.93%), Postives = 159/295 (53.90%), Query Frame = 3
Query:  210 ESHLYMAQPVSRQFWQTVAFQSAPTEY---CPHCYNFRGVSAVQERG------------GGGPWPHLKLYEEGKLNTNGNYMETSATAVRHVSPCGDPVQTASSDTSNVYGMANWNYPVLTEFQQNSEFQVKIVVSTHHWGHIELNLCDASGME---DAEVTHECLSRYPLDRAPAE-MEPPIDPLHPGRYFLDPPCRSAETDQSFDTGGAEGGDIVTMTFKLPPVLTCDRCVLQMMYYVSNACVHPGYATFESDDWPPGCAPAKNDWVSEGMAVCGTEGTNYVEEFASCADISI 1037
            E+  Y+  P SR    +  FQS   E    CP C N  G   V+E+G            G G WP L  Y +G++  NGN+ E    + RH   CGDP Q  S +++N Y  +  ++  L   ++     +K+VV+ +  GH+E  +C+++ +     ++   EC +  PL RA  + +  PIDP +PGRY+++PPC + E  ++   G A+ G ++ M ++LP  LTCD CVLQM++Y  N C H GY  FE + WP  CAP K +W++    +CG  G  Y EE  SC+DISI
Sbjct:   20 EAGTYVLTPTSRPVLHSAVFQSETAEKFEDCPGCLNSGGPVYVKEKGIGYTNGGLLAEYGDGEWPLLAAYNKGEMCDNGNFYERDEISARH-GICGDPKQ-FSLESTNAYSSSLSDWSALETLKEGGVLDIKVVVAEYLGGHLEFFICNSADLRYGPTSKPNQECFNMNPLTRAEGDDVNSPIDPAYPGRYYVNPPCHATEHPEALPDG-AQDGYVINMQYQLPEGLTCDHCVLQMVHYTGNTCKHVGYDDFEPESWPSQCAPTKAEWINTDHWMCGMAGA-YPEEHWSCSDISI 310          
BLAST of mRNA_Ecto-sp13_S_contig7043.18105.1 vs. uniprot
Match: A0A0G4HRU4_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HRU4_9ALVE)

HSP 1 Score: 166 bits (419), Expect = 5.240e-42
Identity = 123/380 (32.37%), Postives = 175/380 (46.05%), Query Frame = 3
Query:  207 VESHLYMAQPVSRQFWQT--VAFQSAPTEYCPHCYNFRGVSAVQERG--------------GGGPWPHLKLYEEGKLNTNGNYMETSATAVRHVSPCGDPVQTA-SSDTSNVYGMANWNYPVLTEFQQNSEFQVKIVVSTHHWGHIELNLCDASGMED--AEVTHECLSRYPLDRAPAEME-PPIDPLHPGRYFLDPPCRSAETDQSFDTGGA---EGGDIVTMTFKLPPVLTCDRCVLQMMYYVSNACVHPGYAT--FESDDWPPGCAPAKNDWVSEGMAVCGTEGTNYVEEFASCADISIVGEDDTIDTAKGSATATTNDITTTAEDDDATCDCSNACVSVWKQCGGGGDDGFNGSQTCCE-GATCVQRSDSYAQCVP 1268
            V  H Y+A P SR         ++ A  EYCPHC    G  A + R                 G +P   L E G ++  G  +E  + A RH   CGDP Q   +SD+     + N+  P  + +       +++V++ HH GH E  LCD   + D   ++   C ++YPL RAP E E  P+DPL+PGRY+L+PPC     DQ+   G     E      M + LP +  C+ CVLQ  ++ +NAC   GY    F +     GC+    DW  + +  C    T   EEF +CADI+I  + + + T   +A        TT +    T   S  C ++W QCGG    G     TCCE G+ C   +  Y+QCVP
Sbjct:   18 VAGHGYVATPPSRNALARNFQGWEGAQPEYCPHCLQSGGPDATRARQIANEDPAVNAQYGIRSGQYPIDLLIEGGAVSEVGTVLEPPSIAKRH-GVCGDPGQVRDASDSRFNQDVTNYAVPTASVYSSGGIIDIEVVITAHHRGHYEFFLCDVRDLPDPSGKLEQACFNKYPLRRAPVEGEISPVDPLYPGRYYLEPPCARDHVDQTVANGYKRHFESAQTTRMQYYLPDI-ECEHCVLQWYWWEANACNPIGYRREYFSTVKEFDGCSAG--DWWQDNLRDCKDGNT---EEFWNCADIAITRDGNPVPTIIPTAPPAEE---TTTDASGTTAPPSGDCSALWGQCGGQNWSG----PTCCESGSVCQFGNPWYSQCVP 383          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7043.18105.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
D8LPI5_ECTSI2.610e-23884.64EsV-1-166 n=2 Tax=root TaxID=1 RepID=D8LPI5_ECTSI[more]
D8LD67_ECTSI1.320e-9150.34EsV-1-166 n=2 Tax=Ectocarpus siliculosus TaxID=288... [more]
D8LM93_ECTSI2.250e-9050.00EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D8LM92_ECTSI4.990e-8850.34EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5KTY6_9PHAE1.110e-8650.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMF4_ECTSI4.890e-8647.62EsV-1-166 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM... [more]
A0A6H5KD35_9PHAE7.140e-7648.85CBM1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FP25_ECTSI3.530e-6541.92EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5JFL8_9PHAE3.070e-5335.93CBM1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A0G4HRU4_9ALVE5.240e-4232.37Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7043contigEcto-sp13_S_contig7043:4710..5980 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score302.8
Seed ortholog evalue2.3e-79
Seed eggNOG ortholog2880.D7FSZ8
Model size1271
Hectar predicted targeting categorysignal peptide
Exons1
EggNOG free text desc.Fungal-type cellulose-binding domain
EggNOG OGs2CZUJ@1,2SBQR@2759
Cds size1104
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463966.6661453-UTR-Ecto-sp13_S_contig7043:4709..48761681463966.6661453-UTR-Ecto-sp13_S_contig7043:4709..4876Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7043 4710..4876 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463966.68272-CDS-Ecto-sp13_S_contig7043:4876..59801681463966.68272-CDS-Ecto-sp13_S_contig7043:4876..5980Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7043 4877..5980 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7043.18105.1prot_Ecto-sp13_S_contig7043.18105.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7043 4877..5980 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7043.18105.1

>prot_Ecto-sp13_S_contig7043.18105.1 ID=prot_Ecto-sp13_S_contig7043.18105.1|Name=mRNA_Ecto-sp13_S_contig7043.18105.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=368bp
MNILELFFALAPLVESHLYMAQPVSRQFWQTVAFQSAPTEYCPHCYNFRG
VSAVQERGGGGPWPHLKLYEEGKLNTNGNYMETSATAVRHVSPCGDPVQT
ASSDTSNVYGMANWNYPVLTEFQQNSEFQVKIVVSTHHWGHIELNLCDAS
GMEDAEVTHECLSRYPLDRAPAEMEPPIDPLHPGRYFLDPPCRSAETDQS
FDTGGAEGGDIVTMTFKLPPVLTCDRCVLQMMYYVSNACVHPGYATFESD
DWPPGCAPAKNDWVSEGMAVCGTEGTNYVEEFASCADISIVGEDDTIDTA
KGSATATTNDITTTAEDDDATCDCSNACVSVWKQCGGGGDDGFNGSQTCC
EGATCVQRSDSYAQCVP*
back to top

mRNA from alignment at Ecto-sp13_S_contig7043:4710..5980+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7043.18105.1 ID=mRNA_Ecto-sp13_S_contig7043.18105.1|Name=mRNA_Ecto-sp13_S_contig7043.18105.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1271bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7043:4710..5980+ (Ectocarpus species13 EcNAP12_S_4_19m)
CTTCGGCGGGGGATTCGGGTTCTTGTCTGAGTGCATCGTACGCCGCTCGC ATTCTCTTTTTACGAAGGCAACAGATCCAGTCCATTCTTATCGTTATTAT TGTAAACTAAATATTTTCTATGGAACAGCTCGAATAAATATTATTATATT GGCTGCAAGCAACAGTCATGAATATTCTGGAGCTCTTCTTCGCACTTGCG CCGCTGGTGGAGTCGCACCTCTACATGGCACAGCCAGTCAGTCGGCAATT TTGGCAAACCGTGGCCTTCCAGTCCGCTCCGACGGAATACTGCCCCCATT GCTACAACTTCAGAGGCGTTTCTGCCGTTCAGGAGAGAGGCGGCGGCGGA CCTTGGCCGCACCTCAAGTTATACGAAGAAGGAAAACTTAACACAAACGG CAACTATATGGAGACCAGTGCTACTGCAGTTAGACACGTCTCTCCGTGTG GCGATCCTGTCCAGACCGCTTCCTCAGACACCTCAAACGTCTACGGGATG GCCAACTGGAACTACCCCGTCCTGACCGAGTTCCAGCAGAATTCAGAGTT CCAGGTGAAGATCGTCGTCTCAACGCATCACTGGGGCCACATCGAGCTGA ATCTATGCGACGCTTCTGGTATGGAGGACGCGGAAGTGACGCACGAGTGC CTGTCAAGGTACCCTCTCGACCGCGCTCCGGCAGAGATGGAGCCGCCGAT CGACCCCTTGCATCCTGGCCGATATTTCCTCGATCCTCCCTGCCGTTCCG CGGAGACGGACCAGTCTTTCGACACTGGTGGGGCCGAAGGCGGCGACATC GTCACGATGACGTTCAAACTTCCCCCGGTGCTCACGTGCGATCGGTGTGT TTTGCAGATGATGTACTACGTTTCGAACGCCTGTGTGCACCCGGGATACG CGACTTTCGAGAGCGATGACTGGCCCCCGGGGTGCGCTCCTGCGAAAAAC GACTGGGTCAGCGAGGGCATGGCCGTGTGTGGAACCGAGGGGACCAACTA CGTGGAGGAGTTTGCGTCGTGCGCCGATATTTCGATTGTCGGAGAGGACG ACACCATTGACACGGCGAAGGGCTCGGCGACGGCGACGACCAACGACATT ACGACGACCGCCGAAGACGACGATGCCACGTGCGACTGCTCGAACGCATG TGTCTCCGTCTGGAAACAGTGCGGTGGCGGCGGCGACGACGGCTTTAACG GAAGTCAAACCTGTTGCGAGGGCGCGACGTGCGTGCAGAGAAGCGATTCG TACGCGCAGTGCGTGCCTTAG
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7043:4710..5980+

>mRNA_Ecto-sp13_S_contig7043.18105.1 ID=mRNA_Ecto-sp13_S_contig7043.18105.1|Name=mRNA_Ecto-sp13_S_contig7043.18105.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1104bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7043:4710..5980+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAATATTCTGGAGCTCTTCTTCGCACTTGCGCCGCTGGTGGAGTCGCA
CCTCTACATGGCACAGCCAGTCAGTCGGCAATTTTGGCAAACCGTGGCCT
TCCAGTCCGCTCCGACGGAATACTGCCCCCATTGCTACAACTTCAGAGGC
GTTTCTGCCGTTCAGGAGAGAGGCGGCGGCGGACCTTGGCCGCACCTCAA
GTTATACGAAGAAGGAAAACTTAACACAAACGGCAACTATATGGAGACCA
GTGCTACTGCAGTTAGACACGTCTCTCCGTGTGGCGATCCTGTCCAGACC
GCTTCCTCAGACACCTCAAACGTCTACGGGATGGCCAACTGGAACTACCC
CGTCCTGACCGAGTTCCAGCAGAATTCAGAGTTCCAGGTGAAGATCGTCG
TCTCAACGCATCACTGGGGCCACATCGAGCTGAATCTATGCGACGCTTCT
GGTATGGAGGACGCGGAAGTGACGCACGAGTGCCTGTCAAGGTACCCTCT
CGACCGCGCTCCGGCAGAGATGGAGCCGCCGATCGACCCCTTGCATCCTG
GCCGATATTTCCTCGATCCTCCCTGCCGTTCCGCGGAGACGGACCAGTCT
TTCGACACTGGTGGGGCCGAAGGCGGCGACATCGTCACGATGACGTTCAA
ACTTCCCCCGGTGCTCACGTGCGATCGGTGTGTTTTGCAGATGATGTACT
ACGTTTCGAACGCCTGTGTGCACCCGGGATACGCGACTTTCGAGAGCGAT
GACTGGCCCCCGGGGTGCGCTCCTGCGAAAAACGACTGGGTCAGCGAGGG
CATGGCCGTGTGTGGAACCGAGGGGACCAACTACGTGGAGGAGTTTGCGT
CGTGCGCCGATATTTCGATTGTCGGAGAGGACGACACCATTGACACGGCG
AAGGGCTCGGCGACGGCGACGACCAACGACATTACGACGACCGCCGAAGA
CGACGATGCCACGTGCGACTGCTCGAACGCATGTGTCTCCGTCTGGAAAC
AGTGCGGTGGCGGCGGCGACGACGGCTTTAACGGAAGTCAAACCTGTTGC
GAGGGCGCGACGTGCGTGCAGAGAAGCGATTCGTACGCGCAGTGCGTGCC
TTAG
back to top